mal2 (mal2,LOC107757438,LOC107571097,LOC107738940,LOC107677950,LOC107683116)


Basic Information

Item Value
gene id mal2
gene name mal2,LOC107757438,LOC107571097,LOC107738940,LOC107677950,LOC107683116
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 10553160 ~ 10569797 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261968.1
ATTCCAGCAGGATTTTCCAATGCGTTAGTCCTTTGTTCAACCTGTATTTGTCAAGCCGAATGAGGATGGCTGAAACACAGAACCCTGCCACTACCTCTTTTCCAGCACCAACTATTTCTTTACCCCTTGGAATGGAAATATTGAGAACATATTCAGGGGCCCTGATTTGTTTGGAAATCgtGTTTGGAGGGTTGGTGTGGATATTAGTAGCGTCGACGAATGTGTCTGTGCCTTTGTTGCAGGGATGGGTGATGTTTGTGTCAGTAACCATGTTCATCTGTTCATCTTTATACCTTGCCCTGTTTCTGCTGGGCCTGGCTGACAAAATTAACACTGACTGGAATTTCATGGATATGTTCTACCATTTCATCgctatgctgttttattttggtgCGTTTTTGCTGGAAGCTACAGTTTCATCTGCCGGTACATATGCCAACAGCACCTGCATACGCAGACCCCGTGgcaatataataacatttctgGACTATAGAGAATATAGCATTAATGTGACTGCTGCGatattttcatttatagtgACTTTGTGTTATGGCTGTAGCATGTTCATGGGCTTCAGGAGATGGAGAAAATAGCACACAAAAATGAAGCTTGTAACCgattcataatattaaatatactgttATGGACATTACATAAGGTGATAATGGTTTACCAAAATGGCTCTTAGGACTTTAGTCACATTAAagtacaattaattatttttatttgtatatatatatatatatatatatgtatgtatgtatagttgtgtgtgtgtgtgtatatatatatatatatatacacacacacacacacacacacacacacacaacagtgaaaccagaaactataacaGCTCTTCACTCTTTCccacattttgttaaattacaCGATCATGTTTCTACTGATCATTAGATGTTTTATACAAATATCCAAGCCATAAAGTCCAAGGAATTG
>XM_043261969.1
ACTTGATTCCAGCAGGATTTTCCAATGCGTTAGTCCTTTGTTCAACCTGTATTTGTCAAGCCGAATGAGGATGGCTGAAACACAGAACCCTGCCACTACCTCTTTTCCAGCACCAACTATTTCTTTACCCCTTGGAATGGAAATATTGAGAACATATTCAGGGGCCCTGATTTGTTTGGAAATCGGATGGGTGATGTTTGTGTCAGTAACCATGTTCATCTGTTCATCTTTATACCTTGCCCTGTTTCTGCTGGGCCTGGCTGACAAAATTAACACTGACTGGAATTTCATGGATATGTTCTACCATTTCATCgctatgctgttttattttggtgCGTTTTTGCTGGAAGCTACAGTTTCATCTGCCGGTACATATGCCAACAGCACCTGCATACGCAGACCCCGTGgcaatataataacatttctgGACTATAGAGAATATAGCATTAATGTGACTGCTGCGatattttcatttatagtgACTTTGTGTTATGGCTGTAGCATGTTCATGGGCTTCAGGAGATGGAGAAAATAGCACACAAAAATGAAGCTTGTAACCgattcataatattaaatatactgttATGGACATTACATAAGGTGATAATGGTTTACCAAAATGGCTCTTAGGACTTTAGTCACATTAAagtacaattaattatttttatttgtatatatatatatatatatatatgtatgtatgtatagttgtgtgtgtgtgtgtatatatatatatatatatacacacacacacacacacacacacacacacaacagtgaaaccagaaactataacaGCTCTTCACTCTTTCccacattttgttaaattacaCGATCATGTTTCTACTGATCATTAGATGTTTTATACAAATATCCAAGCCATAAAGTCCAAGGAATTG

Function

symbol description
mal2 Predicted to be a structural constituent of myelin sheath. Predicted to be involved in myelination. Predicted to act upstream of or within transcytosis. Predicted to be located in membrane raft. Predicted to be integral component of membrane. Orthologous to human MAL2 (mal, T cell differentiation protein 2).

NR:

description
protein MAL2

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261968.1 True 957 mRNA 0.37 4 10553160 10569792
XM_043261969.1 False 899 mRNA 0.37 4 10553160 10569797

Neighbor

gene id symbol gene type direction distance location
LOC122361025 LOC107757443,LOC107691877 coding downstream 130881 10408015 ~ 10422279 (-)
prpf3 prpf3,LOC107677690,LOC107719195 coding downstream 150124 10391834 ~ 10403036 (-)
ice1 LOC107746963,LOC107691875,LOC107566277,LOC107735420 coding downstream 166566 10372411 ~ 10386594 (-)
LOC122361022 LOC107572826,LOC106588695 coding downstream 180889 10364421 ~ 10372271 (-)
adcy2a adcy2a,LOC107664610,LOC107551198,LOC108429235,LOC108272199 coding downstream 198564 10287086 ~ 10354596 (-)
colec10 LOC107738939,LOC107574455,LOC107677951 coding upstream 1954 10571751 ~ 10587718 (-)
LOC122361028 cabz01093075.1,LOC107601667,LOC107751875,LOC107746976,LOC107704092,LOC107684228,LOC107551204 coding upstream 238540 10808337 ~ 10811017 (-)
LOC122361032 LOC107746978,LOC107684223,LOC107551206,LOC107704083,LOC107751909,LOC107601659 coding upstream 248094 10817891 ~ 10823189 (-)
LOC122360214 LOC107752837,LOC107662667,LOC107581612 coding upstream 867576 11437373 ~ 11453509 (-)
LOC122360822 LOC107596715 coding upstream 923302 11493099 ~ 11501213 (-)
G111097 NA non-coding downstream 677496 9875392 ~ 9875664 (-)
G111048 NA non-coding downstream 798180 9754315 ~ 9754980 (-)
G111045 NA non-coding downstream 876655 9674864 ~ 9676505 (-)
G111025 NA non-coding downstream 929041 9623700 ~ 9624119 (-)
G111024 NA non-coding downstream 932707 9620119 ~ 9620453 (-)
G111298 NA non-coding upstream 160371 10730168 ~ 10730415 (-)
G111329 triob,LOC107746974,LOC107551199,LOC107684227,LOC107601652,LOC107751902 non-coding upstream 221767 10791564 ~ 10793616 (-)
LOC122361039 NA non-coding upstream 354318 10924115 ~ 10924764 (-)
G111393 NA non-coding upstream 590042 11159839 ~ 11160056 (-)
G111420 NA non-coding upstream 655389 11225186 ~ 11225409 (-)
gask1a fam198a,LOC107732434,LOC107657576,LOC107751903,LOC107704082 other downstream 650179 9877211 ~ 9902981 (-)
G110974 NA other downstream 1280555 9270971 ~ 9272605 (-)
G110911 LOC107749154,LOC107686954,LOC107596765,LOC108428931,LOC108268943,LOC107751895,LOC107656720 other downstream 1400977 9145930 ~ 9152183 (-)
wu:fj39g12 nppcl,LOC107744681,LOC107699924,LOC107749278,LOC107685603 other downstream 1916938 8633350 ~ 8636222 (-)
G110556 NA other downstream 2236475 8312265 ~ 8316685 (-)
LOC122361037 cables1,LOC107708521,LOC107747516,LOC107681774,LOC107691165 other upstream 175779 10745576 ~ 10764305 (-)
LOC122360812 cobl,LOC107746964,LOC107684220,LOC107551210 other upstream 287723 10857520 ~ 10883424 (-)
G111450 mal2,LOC107757438,LOC107571097,LOC107677950,LOC107738940 other upstream 699823 11269620 ~ 11286432 (-)
LOC122360600 enpp2,LOC107757440,LOC107745056,LOC107697648,LOC107574906,LOC107681346 other upstream 763378 11333175 ~ 11386993 (-)
G111490 si:dkey-12j5.1,LOC107738871,LOC107549224,LOC107689883,LOC107717803,LOC108256403,LOC108426361,LOC107593733 other upstream 840881 11410678 ~ 11411777 (-)

Expression


Co-expression Network