mex3a (mex3a,LOC107592477,LOC107688221,LOC107592188,LOC107756899,LOC106605309)


Basic Information

Item Value
gene id mex3a
gene name mex3a,LOC107592477,LOC107688221,LOC107592188,LOC107756899,LOC106605309
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 27933074 ~ 27939751 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261984.1
TACATGCAGCGCGGCTTGCCATAGGCGGGGACTGAGCGAACCAGACGGGGTGGAGCAACGCTTGGCCTGGCCCCTCTCGGCGCAGACATCCTTGTGTCCCGTTCGCCTTGCGCGTTTCGGAACCGGAGAGGGGGCTGGTCTGTGGGAGGGACTAGCGCAAAGGGGGGACTAGGACCAGGAGGGGGCGGGGTGGCGGCGAGGGTGCTGTTTCTCCAGTCTCTTACCAGTGTCTTTGTCTCACACTCTTTTGTTAGCCATGCCTAGCTTGCTGGTTCTAGCAGGGATCATGGAGAAAAATGGGGGCTACGGCGGGGATTTGGCCGGCTCCGGCTTCGGCAGCGAAGGTCTCCTGGTGCCAcccgaggaggaggaggacgattCCCGTGCCCTTAGAGTTGCGCTGGGCCAACTGTCGCTGCTGGGTCTTGGAGAGGGCGAGGACGGGGCTCCTGCGGGTGGAGGTGGCGGTGGTGGAGGAGTTCAAGACAGGAGTAACAATAACCATCACAATCACATCCCAGCCGATTCGGGGATGTTACAAGGGAAGAACAAGTTGTGCGCCCTGTACGAGAGCTCGCCCACCGAAACCAAAGGACGGGGCTGCAACATAACGGAGTGCGTCCCCGTGCCAAGCTCCGAACATGTGGCCGAAATAGTGGGGAGGCAAGGTTGCAAAATCAAAGCTTTGCGCGCAAAGACAAACACCTACATCAAGACCCCCGTCCGAGGCGAAGAACCAGTCTTCCTCATCACCGGCCGCAAAGAGGACGTGGCCCTGGCCAGACGTGAAATCATCTCAGCTGCGGAGCACTTTTCCATGCTGCGGGCCTCCAGGAACAAGCTGGGCGTCTCTTTCAGCGGCTCGCCTCCTGCGCCGCTCCCTGGCCAGACCACCATACAGGTGCGGGTGCCCTACCGTGTCGTGGGTCTGGTGGTCGGGCCGAAAGGCTCGACTATAAAGCGCATACAGCAGCAAACGTGCACTTACATCGTGACTCCGAGCCGCGACCGCGACCCCGTCTTTGAGATCACCGGCTCCCCCGGAAACGCCGAGCGGGCGAGGGAAGAAATCGAGGCGCACATCGCCTTCCGCACGGGTGGCCTGCATGACCACAACAATGAGAACGACTGCTTGGGACCTGACAGCGGCAACGGGGGTCTGGAGAGCCGCCTGCAGCAGGTGTGGGGGCTACAGGGGGCCCCGCGCAAGCCGCTTGCCAGCAGCTACCGCCAGAATTTCTCAGACGCCATGGTCGGAAGTGgcagtggaggaggaggaggaggaggtggaggcgGCGGCGGGATTTACAGTAAAGGTGACTTTACCAACCACAGCAGTGGGGACAAGCCATGCTCCTACTTCGGATCCGAAGGCACTCAAAGCTGGGGCGATCCCGACTATCCCAAACAGGTGGCTTACTACGCCCAGCAGCGCTCCAAAAGCTTTGGAGGCCTGCCTCTTCCTCTGACCAGACTGTCGCCAGGACTGCCCGAACCGTGCGGCACCGGAAACTCCAACGCGGTGGGGTCTCCTCACGCCCAGGCACGCCGTGCCCACAGCGAGCCCACCGCCGTCACCGCCGCGTTCACCGGACGTCTCCCCGTGCCGGATTCTCCGCCCGCCATAGCCCGGGACTGCATGACCTGTTTTGAAAGTAAAGTGACCGCTGCTCTGGTCCCGTGTGGTCATAACCTCTTCTGCATGGAGTGCGCCATCCGAATTTGTGAGCTAAACCATCCGGAGTGTCCTGTCTGCCACACCCTGGTTACACAGGCTATCCGGATATTCTCTTAAGAAGTCGACttatctttactttttttttttttttttttttgtggttcgTTTTTACTCTGTAGAATCAGTTCACTTttaatcttgttttgttttcttttggtcagtattcactttttttatttttcagaaaacacaaaaccaaaacaagcAGATATTTTAGAACACACTGCTtggtttactaaaaaaaaaaaaaaagaggaagaagtattttcagatttttcttttatatgtacacatatatacatatatattttataaaagtttttttaaaaatggaaagaacGTAGTTCTTAGCATCttggtttgttttgctttattttatttaattttttactggtgctgtttttttccacatGCTGCGTGTGGACAGTAACAGAAGAAATAATGTGAACATTTTACACTTTTCCTTTGCTGGGGAGGTATATtactatatgaaaaaaatatcattacGAGTTTATTTCCTAAGATTGGAGTATAGTTTTACATCCCAGCATCTTCTGCAAATGAGCgagtattcttttttttaaggcaaaCTAGAATCTTAAATCTTTGCACCTTAAAACTGATGTAAAGTGAttgtcaaaaaaacattacatttctagATGTCTATGCGAAATAGATGGTATAGAAATAGGGGCTGATATATACGACCTGATGGCTTTAAATTCAGATCATCACAATTACCGATGTAGTATCTGCTTTGCAAATCAATAATCGAACGGGTAATTGACGAGTAAAACAGGGAGTTTCTTTTTcgtttcgttttgttttgtttctgcacCAGTGAGCCTATTATGTGATGTATCTAAAATGGTCTTATTAGGTACAatacgaaagaaaaaaaagaaaggaaaaactaTTTGAGCAAACTGATTGGTCAGctcaaaaaaaaaccttggaaCTCATCCAGCGTTGTTTTCAAGAGGACTTCCCGGGTTCTTTCAGTaacgtttttttattctctttcctGCACTCAGTAcgtttatgatttttttttttccttttacgcATTATTTAGTAAAACGCTGAACATAAGGCATAAGAtgaagtaggaaaaaaaaaaaaaaagagggggcGATTGAGGGGAGGGGGTCTGTAATCTGATCCTGAATAGACCAAATAGACAAAAGCAAGCAAGACTCCGAGCTACAGTACAATGTAAATCACCCGTTCCCGAGTTGCAAAGCGTCCTCCGACTGTCCGTCTGCACTGAGGCAGGTGTTGCATATCGTACTCTagattaagtttttttattttccgaGGGTCCGGTTTGTCGGGGAGGACTGTGCTCCAATTCCACGAAGCGCTCATTCGCTGTAATGACGACCGAGCTCCTCCCAGTGAGTATATTGTTTTGTCGCAGTGGTGGTACAATCCCCGGAGCGCCCCGACATGGCCTGCCCTAGGAGGAGCCGATAATTAGCCATACATCAGAGTCCAGGTGCAAAGCAACTGCCGTAGGAAGGAGGGGCGGCGTACAGTGGCGTGAATGAGGACGGAGACGCCGCACGGGGGGCTAAACTAGGTGCAGCTGGGGCCCCTCCTGTTGATCGCTCGCTCGCTCCCGTTCTGGTATTCCCATTGGGGAGAAACGGGGGCCTCTTTTGTCCTGCCGTTGGgtggaaagaagaaaaaaaaaatccaagagCAGATTTCATTTCAAAGAGAAAAGCTGGCCCTTCTGAGTTGAGAGAGTGTGACTAGATAGACCCAAAGCATTTTTTCTTCTGAGATTTCTCGTTTAATGTGCACAAGAGGCAGGCCGTCGAAGTTTCCATGGAGTCTTCCTTCATGAGCGGGACATCCTGCCGTGACCCCCTCGAGACGGGCCTGCCAGCGTACGGTCACGAGCAGCCAATCGGAGAACAACCTTGAACTCCACAATGAAATCAGACAATTGTAATTGACAAGAAAGCAGGGGGGGAAACGCCCAATTTGGTGGCCGCTCATGCTGAATCGAATTACACACCCACTGCCCGTCTCATTGCAGGCTGGGGGATTTCGGGATAGGGGATTAGAGTGTTCGAAGGTTGAgaaactgtctttttttttttctctttt

Function

symbol description
mex3a Is expressed in brain; olfactory epithelium; optic tectum; and retina. Orthologous to human MEX3A (mex-3 RNA binding family member A).

NR:

description
PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein MEX3A

GO: NA

KEGG:

id description
K15686 MEX3, RKHD; RNA-binding protein MEX3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261984.1 True 3856 mRNA 0.50 2 27933074 27939751

Neighbor

gene id symbol gene type direction distance location
tmem176l.4 NA coding downstream 32314 27896728 ~ 27900760 (-)
LOC122360376 rpz5,LOC107728472,LOC107688231,LOC107592460,LOC107726664,LOC107671422,LOC107592128 coding downstream 239136 27690440 ~ 27693938 (-)
LOC122360378 rpz4,LOC107688231,LOC107592460,LOC107756901,LOC107671422,LOC107726665,LOC107592129 coding downstream 242954 27685267 ~ 27690120 (-)
LOC122360733 ubqln4,LOC107756885,LOC107726678 coding downstream 295543 27631766 ~ 27637531 (-)
LOC122359999 lamtor2,LOC107688283,LOC107592476 coding downstream 302800 27628557 ~ 27630274 (-)
zmp:0000000881 LOC107756898,LOC107688220,LOC107592478,LOC107726696,LOC107671483,LOC107592126 coding upstream 26691 27966442 ~ 27971009 (-)
LOC122360891 thsd7a,LOC107671443,LOC107688266,LOC107756884,LOC107726647,LOC107592524 coding upstream 151134 28090885 ~ 28127371 (-)
G116835 NA non-coding downstream 225616 27706606 ~ 27707458 (-)
G116834 rpz3,LOC107688230,LOC107592462,LOC107671478,LOC107592463,LOC107728473 non-coding downstream 228140 27701126 ~ 27704934 (-)
G116833 NA non-coding downstream 255815 27675988 ~ 27677259 (-)
G116814 NA non-coding downstream 320574 27612068 ~ 27612500 (-)
G116812 NA non-coding downstream 324109 27608212 ~ 27608965 (-)
G116865 NA non-coding upstream 12817 27952568 ~ 27954707 (-)
G116867 NA non-coding upstream 20880 27960631 ~ 27961680 (-)
G116836 rpz,LOC107688232,LOC107592467,LOC107728474,LOC107726667,LOC107671398 other downstream 128304 27707716 ~ 27804770 (-)
LOC122359885 rab25b,LOC107756889,LOC107592474,LOC107688282,LOC107671436,LOC107592134 other downstream 305414 27622629 ~ 27627660 (-)
LOC122360079 NA other downstream 353208 27520190 ~ 27579866 (-)
G116745 plekhg4b,LOC107569053,LOC107659069,LOC107601962,LOC108426379,LOC107729806 other downstream 572245 27358707 ~ 27360829 (-)
LOC122360878 NA other downstream 934715 26993974 ~ 26998359 (-)
G116868 NA other upstream 23737 27963488 ~ 27964958 (-)

Expression


Co-expression Network