si:ch211-135n15.2 (LOC107719151,LOC107592495,LOC107666737,LOC107714311,LOC107686628,LOC107592633)


Basic Information

Item Value
gene id si:ch211-135n15.2
gene name LOC107719151,LOC107592495,LOC107666737,LOC107714311,LOC107686628,LOC107592633
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 20260835 ~ 20264890 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043262037.1
TAAAGATGCCTAGACGCAACGGTGTGACCAGCATTCTGCAGCAGTCAGTGTCACCTTTTGATCAGCGTGTGGCGTCTAAATTCCTGAAGATCAGGCCAAAGATTCTGGGGGTTTTGGAAATATCAATAGGTATAACTATGTTGATCTTAACAATCTGGACGGGATTTTTATATCTCCTCTGGTCATGTTTAATTTCGATTTTAACCGGATCTGTGACTGTGTCAGCTGCATGTACACGTAACACGTGTCAGGTCAGAATCTCACAATTTCTTAACTGTTTCAGTGCCATAGCAGCTGCTATTTCCATCCCATTTCACTGTCTTGACAGTGATGGCGTGACTCTAGTTCTCCTGGTTTTCTGTGATGCTCTGGTCTTCATCATCTCTGTTATTGTTGCATCGTCTTCCTGTGACTGCTGCAGGATGAAGTCAAGAGATGTTGCAGTCAGTTACATAAACCGAGATGTGCCTTACATGACTGACAGCAATATTGTGCAACCAGGCCCTTTTGCACCTCCACCAAACTACGATACAAGTCCTTTAGAGCCTCCACCAAAATACCATCCAACTCCTCTTGAACCTCCACCAAAATACTATCCATGTCCTACACATCAAGCAAACTCAACACCGCCACCAAACAGTTATACAAGTCCCCTCCACTGAGTTATGATCCCTACTATTAGGGATCTATTAACTATTAGGTAATTAACAGTTTGCATTTTCGCAACAGAGCATATTTCAAGCTTCTTACTTTCTggatataatttatattgttcAAAGACACTCTCTTAAAAAATGTGCGTTTcatattttgaacatttgtttGTGTTACCTCATATGCATCCTTTATATGTGCACAAGTTGCTTTTATAACCTTAAATGTGCACACTTCACAGAAACTAGCATTAGAGATTATATACTGTAATGTTAAACACATTACTACAATTATtagatgtatgtatgtacaagAAGGCAAGATATTAGTCATCATGAAACAAAATAGTCTCTGCCAGCTCATTCAAGTGTTCGGTATTTTATCAAAATAGCAGATATGACCTGTGTTATAAAGATACATAATGTTGCAAATATTGTAGACTACTTGCCTACATATCCCAGATGTTTTAGAaagattcattttcaaaacctcTTGTCGAGTCACAGGGATATTGGAAATGTGTCACAAAGAACACAATAAAATTCAGTGGGGTTCAGGTAACATCagtcttaaatgtttaataacacAGACCACAGATTGATGTGGAGTCTCACCGGATGTAACGCGTAAATCATATTGCATGCACTTGTTTTTTACAGAAAGGCTGTGTTAAATATTGTAGCTTGGACCGTGTGAATGGCTGTGTTTACAGACGTTTATGAAATTGACAATTTAAGCATTCAGAAACAAAGCATCTTTCCAAATGTAATCACGTGCACCGTGTTGGCTTCACAAACAGATGGATGGAGGAGGCCTTCTTGCTGTGATCACTACCACCAACAGCAGCAGAAACATTCTGCTTAAACACTAGGCTACTTAGGAGCTGGAGTCTGAGATCTTTCCAAGTATTGTATTAGACAACAGTAATGTTGCTTGTCCACAAattacaactatatatatatatagagagagagagagagagagagaaagagagagagagagagagagagagagagagagagagagagagagagagagagagagagcgagagagcttTCCATGTAGGATAAATCAAGTAAATCAAGGTCTTTCAGCTCCAATGTGAAAAGTGACTTTTGTGTTAAATTTTTATGTGGCTGACAGTGAAGAGAAAAGCATGTTATTAATGgctgaaaatgaagaaaataaaaatgtatatgcttaTTTGTAAGTCCTTGTTAAGTGTATTACATCTAACTAAATTCCCATCTCAATCCCAACACATATTTGTCTCAGTACATCTAAATATGCCTAAACACGATCATGAGGCCAGCTCTTTTCAGCAGCCAGCATCACCGTTATAGCCAGATATCACCAGTATGTGATATCTAAATTCCTTGAAGATCAGACCGCAGGTCCTCGGGGGAAAGCAAACTGTCCCGCTTCTAATTTGTTCCTGTTGATACCGATGTTGGGGTAACAAGAAAACGTTCACcatcttgttttatgttttacagagTTTGGAAATGGTACTAGGCATAGTGGTGTTTGCCTTAGCGATCTGAAAAGGGTTTGTGGGCTTCTATCATTGTAAGTCTTTAGTTTCAGTATGAGAGCAATATTCTGCATCGAGCAAATAttgaattgtatatttttttctcccctgCAGTCAATTTAATTGGATCTTTGACTGCATTAGCTGCACACAAACGTAATATACAATGggtttgtttgaatattttgcatttcattttactaGAATGAGATTAATAACATCAGAAAAcgacattatattttatagatatttagctaaagagtttttattttctcagacCAGAGCCTCATAGTCTCTAAACTACCTCAACGTCATAGCATCTATTTTCTCCATCCCATTTCATGGGTTTGCAAATGATGTAAATATATAGATTTcctgttttaaatgcatctgcaaaaatcatttactcCACAAGATCATGCGGATTAACGTTGGTTAGTATTAAATGCATTAGTAACAATAACTTACACTGAATAATTATTCATGCTTAATCTCTCTAATACTGTTTATATGCCTTTTGaaatttattacaatttctcaaataaaaataattgtagcTAATGTTGGTTTGATTTTTATGGTTTATGGGGGcgcaaattattttaatgacagtggtatgacagaggtactacaatttgaaggtggtttatgaggacactgccaatgtccccataattcaaaaggtttgcaaaac

Function

NR:

description
PREDICTED: uncharacterized protein LOC107719151

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043262037.1 True 2883 mRNA 0.37 6 20260835 20264890

Neighbor

gene id symbol gene type direction distance location
polr3glb polr3gl,polr3glb,LOC107666760,LOC107714326,LOC107592290,LOC107686116 coding downstream 17270 20239132 ~ 20243565 (-)
rundc3b rundc3b,LOC107666772,LOC107686653,LOC107719153 coding downstream 106187 20139412 ~ 20154648 (-)
dbf4 LOC107666861,LOC107719134,LOC107592429,LOC107686229,LOC107714332,LOC107592324 coding downstream 126894 20129043 ~ 20133941 (-)
adam22 adam22,LOC107719137,LOC107714333,LOC107666740 coding downstream 132872 20076807 ~ 20127963 (-)
mrpl32 mrpl32,LOC107592435,LOC107666771,LOC107686307,LOC107714338,LOC107735708,LOC107580730 coding downstream 219474 20039947 ~ 20041361 (-)
dpy19l1l dpy19l1l,LOC107666881,LOC107719125,LOC107592414,LOC107737812,LOC107686065,LOC107592262 coding upstream 40928 20305818 ~ 20313239 (-)
herpud2 herpud2,LOC107686057,LOC107600485,LOC107719122,LOC107592253,LOC107737813 coding upstream 114290 20379180 ~ 20385456 (-)
pkdc si:ch211-215k15.5,LOC107737834,LOC107592943,LOC107686716 coding upstream 121187 20386077 ~ 20387616 (-)
si:ch211-215k15.4 LOC107666815,LOC107600540,LOC107719123 coding upstream 124584 20389474 ~ 20391866 (-)
fli1rs fli1b,LOC107600493,LOC107719147,LOC107666785,LOC107685964,LOC107592185 coding upstream 315392 20580282 ~ 20592827 (-)
G114747 NA non-coding downstream 15596 20245021 ~ 20245239 (-)
G114718 NA non-coding downstream 16682 20174163 ~ 20244153 (-)
G114741 NA non-coding downstream 43254 20216103 ~ 20217581 (-)
G114663 cldn12,LOC107682396,LOC107686255 non-coding downstream 156565 20101044 ~ 20104270 (-)
G114626 LOC107714343,LOC107666800,LOC107592439,LOC107719142 non-coding downstream 288878 19959867 ~ 19971957 (-)
G114768 NA non-coding upstream 38093 20302983 ~ 20305444 (-)
G114771 NA non-coding upstream 77187 20342077 ~ 20409610 (-)
G114798 NA non-coding upstream 210627 20475517 ~ 20475747 (-)
G114801 NA non-coding upstream 218911 20483801 ~ 20484071 (-)
G114803 NA non-coding upstream 220506 20485396 ~ 20485725 (-)
G114715 NA other downstream 83077 20166795 ~ 20177758 (-)
dpys dpys,LOC107728457,LOC107686378,LOC107666745 other downstream 603111 19596432 ~ 19657724 (-)
cd22 LOC107728466,LOC107592448,LOC107666891,LOC107709614,LOC107686701 other downstream 839741 19416962 ~ 19421094 (-)
rpz rpz,LOC107688232,LOC107728474,LOC107592467,LOC107671470,LOC107592140,LOC107726666,LOC107688233 other downstream 1439725 18812238 ~ 18821110 (-)
LOC122360940 fli1,LOC107692484,LOC107709558,LOC107656981 other downstream 1562428 18684573 ~ 18698407 (-)
G114793 NA other upstream 177075 20441965 ~ 20452450 (-)
scn1ba scn1b,scn1ba,LOC107666845,LOC107737825,LOC107719111,LOC107686587 other upstream 371235 20636125 ~ 20650937 (-)
G114901 NA other upstream 387087 20651977 ~ 20653574 (-)
G115003 cpne4a,LOC107592564,LOC107600547,LOC107666882,LOC107713817 other upstream 747717 21012607 ~ 21017105 (-)
G115093 plekhf2,LOC107666819,LOC107600513,LOC107668314,LOC107591926 other upstream 1111000 21375890 ~ 21378836 (-)

Expression


Co-expression Network