LOC122361100 (LOC107736302,LOC107741982)


Basic Information

Item Value
gene id LOC122361100
gene name LOC107736302,LOC107741982
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 8857464 ~ 8862529 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043262059.1
ACTGGTGAAACATGAACAGGctgcttatataaataaaacaccttAGAGGATTATAATAGCTTTTACAGGGAACGTTTGCTCTGTGTTTGAAAGTTGAACATGGCTGCAGAATTCTCGTGTTGTAAAACACCACCAAGATATCTAGAATCAGAGAAAACGTTTCATTCGCCCGAGCTGAGAATTGTGCTGCTGGGCGCTTCTGGTGTCGGAAAGAGTGCAATAGGAAATGTAATACTGGGCAGAAAGGCTTTTAAAGAGAAACAAACCAGAGTGAGTGAGATACAAAGAGGAAGAGTAGAGGACAGACTCGTCTCAGTCATCGACACTCCAGGATTCTTCACAACTGAACTGAGTGATGAAGAGCTGCAGAGTGAAATAAGAAGGAGTGCTTTTCTCTGTCTCCCTGGTCCTCATGTGTTCCTGCTGATGATCAACCTGAAAAACGCGGATAAGGATGAGAGGAACCTTGTGAACCAAATTCAGGACAACTTTGGACCACAAGCTTTTAAGTTCACCCTGGTTCTCTTCATAGGAAGAGAACAAATGTCCAACAAAGAATGGATGGTCTTtatgctgaataaaacatttcaggagCTAGTCAGACACTGCAGAGATAAATATCACGCAATCAACAGCATAACCGAAATTAACCCAACACACATCACAAAGCTTCTACAGAAGATTGAAGAAATGTTCAAACAGAACGACGGCCAGCATTACAACACTGACATTTGCTTAAAGTCTCCAACCAAGATTAAAAAGGCAAAGCAAAAGCCCGAACCAAAAAAGGAGGAGTcggaaaaacacagagaaagagacaaaaaaagagaaactaaAACCATGTGGAAGacatttaaaagtgtaatacaggaaAACATAACACGTACTGTGATCAAACCTGATAAAGAAACTCTTATTTCTCGTGTGAGAGAAACTGATGAAGACTGGGTTTTCCAAGAAGGCATGAACGTGAGCGGTAGCGGATCATTGGTGAGATCACTGGAATTCTCATACAAACAAATGGCTGAAGTACATGAGATCCAGGAACTCACAGAAACCTGGAAAATAGGCAGAACTGGAAAATGGGACAAGAGAAACGCCCAAGCAGATGTCAGAATTGTGATGGTGGGGAAAACTGGAGCTGGAAAGAGCGCAACAGGAAACACCATTCTGggagaaaaagtttttaaagaagaaatgtGTGCTGAATCTGTGACTAGAAAATGCCAACAATATCAGCAGACGGTAGAAGGTAGGATTATCTCAGTGATTGACACTCCAGGGGTGTGTGACACATCCATGAGAGAACAAGACCTGAAGGATGAAATAGCCAGGTGTGTAGAAATGTCTCTTCCCGGTCCTCATGCTTTTCTACTGGTCATCAGACTGGATGTGAGATTGACGGAGGAGGAGAAGAACACAGTGAAATGGATTCAGGAGAACTTTGGAGAAGATGCTTTAAATCACACCATCGTACTTTTCACTAGAGGAGATCTGTTGAAAAAATCTATTGAAGCAtttctgacagaaaacaagcagatAAATGAGCTAATCGAACAATTTAAAGCTGGTTATCAGGTTTTCAATAACTCAGATGAAAATCCAGCGCAGGTTATTGAGCTTTTACAGAAGATAGACGCAATGATGAAGGGCAATGGAAGAGAGCATTACACAAATCGGATGTACGAGGAAGCTCAGAGGAAAATCcgaaaagaagaagagaagcagAGAGAGGAGGACGAAAGATTAAAGCAAGACGAGGAGCTCAAGATAAGGAAGGATGAACAGAAGAAACTTGTAAAGACTACAAAAATGGGAGCCTTGGTGGGAGCGGGTGTAGGAGGAGTGATTGGAGGTGTAGCGCTGGCTGCGTTTACTGGGATAGCAGTACCTGCAGCTTTAATCACAGGAGGTGCAACTCTAGCTGGAGGAGCTGGTGCACAGCTTCTCACGGAAACAATTAACAGGAAGAGTGGCAAAAAAGCAGCGAATAGTAAAACAGGTAAAGCCCCTAATCATTGAATGATTTCAAGGGGTTTAAAACAGGGGTGTTATAGTATCACGCAGAAGGTAAAGCAGTGTAAATAGTGTATTTATGCCTCCTCTGACAGTTCATGCTTTGTGAATTCAGATCATGACAATCATTAGGTTAATGCTAACTAATGCTACGGAATGTATTGAACACAGAAATAAAGGTGCATTTTTGTACCtattaagtacaaaaatgtacacattaagtactaatatgtacctttaacgTACCAAAATGGACATGTAAAcctgtaccttttgaaaaggtacgtcgccagtgacagcttttgaacctttatttctgagagcgtaCCAGCGTGTGCTACAGACACTATGATTGTGGTTATGGATTAGGTTACGGGTTAGTGTTGTGTTAGCAAACAGCGCTTTGATTGACGAGACCACTGAAATCAttagaaatgtgtaaaaaatttTGACAATGTTTGTATCCTTCTGACTTATATGCATGCAATTGTTTGGATCATCCAACatgtttaaaatggtttaatttttgctgcttatttttattatttgctcttGCATTAAAACTGCATATCCTGTTGCATTCCAGTGCCAGAGACTAGTATCAGGGTCTTTGAAAAATCAGAGGAAAGGtaaaacatttactcacccttgtttATTCTTCTCTGTAAAAAAACCCATATGTCTGCCCTCCGAAAATATTGTTACATCgtaagattattaaaaaaaaaaaaaaaatcacattacttAATTTGCATAACATATTGACTTCACGGTTTACTTTAATGTCACACAATTCAGCTTTTCtttatcatatattttactAGATATCTAAttaacatacattaaatatgtgcacgcaattttttttattagtaagatttttaaataaggtaattaataaatgagataACAGCACACTTTTCCATTTATAAGAATGGCATTTATATCATCGCACTGAATGAATGATAGCACAGCTATAGCATTAAAATAACGGCTCGGTATTACGGGTTGTTCACAATGGCTTGTTTCaagtttgttatt

Function

NR:

description
PREDICTED: GTPase IMAP family member 4-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043262059.1 True 3057 mRNA 0.39 3 8857464 8862529

Neighbor

gene id symbol gene type direction distance location
zgc:174935 zgc:174935,LOC107748729,LOC107684162,LOC107707940,LOC107596684 coding downstream 12640 8841494 ~ 8844824 (-)
LOC122360801 LOC107684163,LOC107748751,LOC107596677,LOC103041564 coding downstream 21862 8834699 ~ 8835602 (-)
si:dkey-17m8.1 LOC107748717,LOC107564863,LOC107684161,LOC107656699,LOC107596738 coding downstream 23584 8821665 ~ 8833880 (-)
ccdc106a ccdc106a,LOC107596676,LOC107748769,LOC107685509,LOC107569999,LOC107699945,LOC107744702 coding downstream 52351 8796757 ~ 8805113 (-)
m6pr LOC107685512,LOC107748841,LOC107596675,LOC107744715,LOC107699943 coding downstream 77441 8774595 ~ 8780023 (-)
tapbpl LOC107749174,LOC107684168,LOC107596689,LOC107741975,LOC107564859,LOC107656706 coding upstream 76018 8938547 ~ 8944648 (-)
grhl2a grhl2a,LOC107748679,LOC107564858,LOC107684167,LOC107596692,LOC107741979,LOC107656701 coding upstream 83642 8946171 ~ 8957450 (-)
ncalda ncalda,ncald,LOC100692199,LOC105901278,LOC106931336,LOC103042493,LOC108268956 coding upstream 98525 8961054 ~ 8996986 (-)
id4 id4,LOC107656716,LOC107748665,LOC107751915,LOC107596695,LOC107684172,LOC107564867 coding upstream 164451 9026980 ~ 9029706 (-)
cep76 cep76,LOC107684173 coding upstream 240985 9103514 ~ 9110755 (-)
G110807 NA non-coding downstream 11471 8845525 ~ 8845993 (-)
G110773 NA non-coding downstream 266830 8589898 ~ 8590634 (-)
G110753 NA non-coding downstream 305912 8547782 ~ 8551552 (-)
G110548 NA non-coding downstream 618288 8237758 ~ 8239176 (-)
G110546 NA non-coding downstream 621671 8234908 ~ 8235793 (-)
G110836 NA non-coding upstream 138258 9000787 ~ 9001428 (-)
G110842 NA non-coding upstream 142009 9004538 ~ 9005206 (-)
G110849 NA non-coding upstream 144768 9007297 ~ 9007532 (-)
G110852 NA non-coding upstream 168606 9031135 ~ 9031449 (-)
G110897 NA non-coding upstream 264156 9126685 ~ 9191339 (-)
wu:fj39g12 nppcl,LOC107744681,LOC107699924,LOC107749278,LOC107685603 other downstream 221242 8633350 ~ 8636222 (-)
G110556 NA other downstream 540779 8312265 ~ 8316685 (-)
G110554 cbx3,LOC107596654,LOC107743152,LOC107744695,LOC107550827 other downstream 555219 8298789 ~ 8302245 (-)
G110544 NA other downstream 640869 8216029 ~ 8216595 (-)
mkxb mkxb,LOC107681765,LOC107566716,LOC107691300,LOC107550429,LOC107747522,LOC107708850 other downstream 765009 8082900 ~ 8092455 (-)
G110911 LOC107749154,LOC107686954,LOC107596765,LOC108428931,LOC108268943,LOC107751895,LOC107656720 other upstream 283401 9145930 ~ 9152183 (-)
G110974 NA other upstream 408442 9270971 ~ 9272605 (-)
gask1a fam198a,LOC107732434,LOC107657576,LOC107751903,LOC107704082 other upstream 1014682 9877211 ~ 9902981 (-)
LOC122361037 cables1,LOC107708521,LOC107747516,LOC107681774,LOC107691165 other upstream 1883047 10745576 ~ 10764305 (-)
LOC122360812 cobl,LOC107746964,LOC107684220,LOC107551210 other upstream 1994991 10857520 ~ 10883424 (-)

Expression


Co-expression Network