LOC122361105 (LOC107582131)


Basic Information

Item Value
gene id LOC122361105
gene name LOC107582131
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 14926292 ~ 14926896 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043262069.1
gcTGTATTATATCAATACAGAAGAAATGACAAAGAGTATATTTGTTTGTGCACTGAATATTTTGACAGTCATTCAGGTCCTTTCACTGCACAGTAGAGGAATTAGAGATGAACAATAGGTAGATGAGAGATGTTGTGAGGCCATTGTGCAATAGGAGGTGAACAGTTAGCTGGCATTTTCCAGAGCTGAATAAAACCCGTTTCACAGAGGGCACTGGGTCCGTGTATCCCACAACACACAGGAGTCAGTTCGCTCCAGGGTTTCATCTGAAGAGGCGTTACGGTCGAAGGAAAAAGTGGAGACCCACAACTCGCAGCGGCAAACAAGGACCTGGCCTGCTCTTCTCCAGTTCCTCCCTTCGAGTATTGCTCGCGCTCTCCAGTCGACCGTGGAGCGGTGGCGAGAGATGCACCCACAGCGTCCGCTGCCCCAGGCCATGCCCTCCTCGCTGGGCCAGAACCTGAGGGATGCAGCTCTGAGGATGGGACATGGCAAGAACCTGCTGGGAGGGAATGTGGCTTATGGAGTCATCCAGTCTCTTAAAGAGTGCCTCTACTTTCTACTCTGCTGCTGGTGCATCAAAGAGATCctggactaaaaaaaaa

Function

NR:

description
PREDICTED: lens epithelial cell protein LEP503-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043262069.1 True 605 mRNA 0.50 1 14926292 14926896

Neighbor

gene id symbol gene type direction distance location
pbxip1b LOC107714683,LOC107673634 coding downstream 1775 14913948 ~ 14924517 (-)
s100t LOC107714712,LOC107594934,LOC107673706,LOC107677025,LOC107582066,LOC107723416 coding downstream 27245 14896221 ~ 14899047 (-)
LOC122360979 LOC107673736,LOC107714679,LOC107723515,LOC107677031,LOC107582064,LOC107596123,LOC561423 coding downstream 179667 14727085 ~ 14746625 (-)
LOC122360089 NA coding downstream 206712 14717064 ~ 14719580 (-)
tuft1a LOC107582063,LOC107723549,LOC107714678,LOC107673742,LOC107594884 coding downstream 211326 14701898 ~ 14714966 (-)
shc1 shc1,LOC107714692,LOC107677023,LOC107723450 coding upstream 141 14927037 ~ 14957235 (-)
si:dkey-247k7.2 NA coding upstream 220128 15147024 ~ 15150068 (-)
trim46a trim46,trim46a,LOC107714687,LOC107723477,LOC107582073,LOC107595016 coding upstream 224848 15151744 ~ 15163625 (-)
osgin2 osgin2,LOC107723494,LOC107596464,LOC107714693,LOC107582167,LOC107699543 coding upstream 405762 15332658 ~ 15340225 (-)
LOC122360842 NA coding upstream 415435 15342331 ~ 15342771 (-)
G113034 NA non-coding downstream 33897 14892040 ~ 14892395 (-)
G112686 NA non-coding downstream 210801 14715216 ~ 14715491 (-)
G112659 NA non-coding downstream 272142 14591362 ~ 14654150 (-)
LOC122359963 NA non-coding downstream 287960 14633214 ~ 14638332 (-)
G112612 NA non-coding downstream 598089 14327952 ~ 14328203 (-)
G113039 NA non-coding upstream 19699 14946595 ~ 14947384 (-)
G113073 NA non-coding upstream 183937 15110833 ~ 15197354 (-)
G113090 NA non-coding upstream 238101 15164997 ~ 15165440 (-)
G113092 s100a10b,LOC107714718,LOC107595024,LOC105891828 non-coding upstream 241477 15168373 ~ 15170070 (-)
G113125 NA non-coding upstream 380969 15307865 ~ 15308418 (-)
LOC122359907 LOC107594909 other downstream 12646 14908620 ~ 14913646 (-)
si:ch211-105c13.3 si:ch211-105c13.3,LOC107673711,LOC107594941,LOC107582067,LOC107677027,LOC107735771 other downstream 21385 14899182 ~ 14904907 (-)
LOC122359961 riiad1 other downstream 338423 14582479 ~ 14587869 (-)
dicp3.3 NA other downstream 423156 14498263 ~ 14503136 (-)
G112478 NA other downstream 624673 14234554 ~ 14301619 (-)
si:dkey-246i14.3 si:dkey-246i14.3,efna4,LOC107595001,LOC107714708,LOC107723547,LOC107677033,LOC107582070,LOC108269281 other upstream 43645 14970541 ~ 15015462 (-)
rps27.2 rps27.2,LOC107699547,LOC107582081,LOC106605923,LOC108429942,LOC107589412,LOC106598061 other upstream 374978 15301874 ~ 15306611 (-)
LOC122360651 LOC107596174,LOC107714662,LOC107714661 other upstream 438292 15365188 ~ 15375304 (-)
rps19 rps19,LOC107657656,LOC103354132,LOC100689943 other upstream 541584 15468480 ~ 15496413 (-)
fxyd6l si:dkey-56f14.4,fxyd6l,LOC107570838,LOC107657592,LOC107723383,LOC107570836,LOC107714713,LOC107699456,LOC107657664,LOC107723441 other upstream 732856 15659752 ~ 15672151 (-)

Expression


Co-expression Network