zgc:174935 (zgc:174935,LOC107748729,LOC107684162,LOC107707940,LOC107596684)


Basic Information

Item Value
gene id zgc:174935
gene name zgc:174935,LOC107748729,LOC107684162,LOC107707940,LOC107596684
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 8841494 ~ 8844824 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043262104.1
AGACGTCTTCACTCCTTTCAAACACTACTCAGGTGAGCAGGAATCTACCgatcgttaaaaaaaaaaaaaaaaaaaaaaaccaggaaGATCGCTGTATTAACATACTTTCCAATTGCATTAAGGAATTAACGTGGACTTGAGTGACATAATAGGTCTGTGTTGAGATCACGGAGAATACACAGTGTTTGCTCTTCAACAATAATGCTATCTTGTGGGAGGGGTTAGTTTCACCGACAGGTAACTCTGATTATCGGTACACCTGCACGCGAGCTTGTGAATCCGGTTCAGCTTCCTCTTGAGCCCTCCATCATGAAGTTTCCTGCACTGCTGCTGGGTTTTGTCTTGGTGTGTAGTCTGGGTATCGCCGGCTACATCCACACCAGACGAAAGCAGGAGACTCAACTAAGCAAACAGGCTTCTTTTCTAGACATTAAGTTCAGAGTGACCAGAGATGTTCTGGGAGAGTACCAAGATCAGCTGATCCAGATCAATACACAGATGGAAAAGACTAAAAAAGAGGTGGACAGTCTAACCAAAGACCTGTCCATAGCCAAGACCTTtgtagagaagaaaaaaagcgaCATAGCTACGTGTAAAGGAGACAAGAAACGATTCACAGATGAAATTGCTGCTGCAGAGTCAGAAAAGAAACACATCCAGAGTGAGTTTGTCAAGGATAAGTCCAATTTGGAAACAGAGGTTGAatctctaaaaaaacaaacggAGCAGATAAGCACACTTTGCAAGTACATTGACAAGACGTCCGAGGAGGGAAAGAAGCTGTGTAAAATAACCGAAGAACCACAGAAGCAAGAGGAGAAGCCCAAGGAAATGCCAGCGGAAAAACCCAATCTCGAGAAAGCTAAAGCCGAGGAACCGAAACCGGAGGAACCGAAACCGGAGGAACCAAAAGCTGAAGAACCGAGAGCTAAAGAGCCAAAAGTCGATGTGGAGTGAAGAACGAGCAAGTGGacgagtttgtgtgtgtttggggagtGGAGAACAATAACCACCACATCAGCGTCCACTGGAGAATTGTATAGGAGGATGAACTAACCTGAACATCTTGCTTGGGTTGATCTCCAGCATTCCAAAGGCATCCCTGAAATGAAACACTCTTTGGGTTCAAGGTTTGACTGACAACATCGCGCGTGGTCTGTCATATTCCTGCTGTGTTTTCTGACaaataattgtgtgtttatgaggAATATGGGATGATGCATGTGTATTGTCtatgaattaaatgatttttgatgtCCGCTTCGCcctcaaataaattataaaaaccgtgtatttattttttttaaaacctccaatttccttttttttttttttttttttcagaaaaagagTGTTAGGTTTCTTTTGCTTTCTGGGTGCgtttgatttgtattatttctttatttccccGCTGTAGTTGACGTTGTCTGTGTTACAGTGTCATTCTGACCCTCCCTCAGGCTCGTTCGTACGTCCCGCTTGTATCGACCAATGGGAAAACTCTGACCCTCTTACTGTCACAACCAATCATCCTCACTCGGTTACCCCGGTTACTATTGTTACGCGGCCCTGGCAACACATAGTTTAACCAATCCGAGCCTTCGGTGAAGCAGAAAACCAGTTACGAAGTTGCTTGCTCTTGTTCTTGTTGTTTGTTAGAAGTTGTGGTTTTGTGCCGACATAATGTGATGTTTGTAAGAAAAGTCAGACTATGATTGGACATTTATGTATTCTTCCAGTAAATGGACCACTTGGCAATATAAAGCTAAAATGCTCGTCTAGTCAACATAATCTGCTCTTAATCTTACTTAAACAGTGGCTTGAAAGTTAAATTTGTCATCCTGGGCTGTTTAACCAGTTTGATGTGTATGTAAGTTATGTTAGGCGTTTCGTGTGACTTGACATGAAACGCAACATGagttttaatatactgtagAGCACCTTCTGACAAATCTTTTACAGTGTTTCTACAATTAATAGgacattttaatttggtttttaattaaatattttgggtCCATTAGAAGTTAGGTTCAATCAGGAGCATGtatggaattatttttttatgcattaaaaaaaaagtataattaggAAGAAATTTAAATCTTACTAAGACACACGCATTtatattaacttttaattttaatttaaccaaaaataacttaatcttctgtggaacatacaAATACGATGTCttgaaaaaatgtcaaatgctttttctttttttttttatgtaaccaAAACTGTTACTAATACTCTTTCtcaaatgttatgttttatagaaaaactgaaaatatatttggaGTAATATGGGCGTGTGTAAAGGATGAGTATGTTCAAATATCTGGAAACGCTTTACAACATTgcattttgttaacattagttgacttgaactaataatgaaaagcacatttaatgcatttattaattttagttgatTTTTAATTACAGCATTTGCTAATGCGTTGTATCTGATTGTCTGATGGACCTGAGCTGCACTAATGTGAActatttgtgtaaataaaataaaatactctaaCAAATATA

Function

symbol description
zgc:174935 Predicted to be located in membrane. Predicted to be integral component of membrane.

NR:

description
ralA-binding protein 1-A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043262104.1 True 2547 mRNA 0.38 4 8841494 8844824

Neighbor

gene id symbol gene type direction distance location
LOC122360801 LOC107684163,LOC107748751,LOC107596677,LOC103041564 coding downstream 5892 8834699 ~ 8835602 (-)
si:dkey-17m8.1 LOC107748717,LOC107564863,LOC107684161,LOC107656699,LOC107596738 coding downstream 7614 8821665 ~ 8833880 (-)
ccdc106a ccdc106a,LOC107596676,LOC107748769,LOC107685509,LOC107569999,LOC107699945,LOC107744702 coding downstream 36381 8796757 ~ 8805113 (-)
m6pr LOC107685512,LOC107748841,LOC107596675,LOC107744715,LOC107699943 coding downstream 61471 8774595 ~ 8780023 (-)
casp2 casp2,LOC107748817,LOC107744674 coding downstream 74285 8759127 ~ 8767209 (-)
LOC122361100 LOC107736302,LOC107741982 coding upstream 12640 8857464 ~ 8862529 (-)
tapbpl LOC107749174,LOC107684168,LOC107596689,LOC107741975,LOC107564859,LOC107656706 coding upstream 93723 8938547 ~ 8944648 (-)
grhl2a grhl2a,LOC107748679,LOC107564858,LOC107684167,LOC107596692,LOC107741979,LOC107656701 coding upstream 101347 8946171 ~ 8957450 (-)
ncalda ncalda,ncald,LOC100692199,LOC105901278,LOC106931336,LOC103042493,LOC108268956 coding upstream 116230 8961054 ~ 8996986 (-)
id4 id4,LOC107656716,LOC107748665,LOC107751915,LOC107596695,LOC107684172,LOC107564867 coding upstream 182156 9026980 ~ 9029706 (-)
G110773 NA non-coding downstream 250860 8589898 ~ 8590634 (-)
G110753 NA non-coding downstream 289942 8547782 ~ 8551552 (-)
G110548 NA non-coding downstream 602318 8237758 ~ 8239176 (-)
G110546 NA non-coding downstream 605701 8234908 ~ 8235793 (-)
LOC122360778 NA non-coding downstream 848627 7988950 ~ 7992867 (-)
G110807 NA non-coding upstream 701 8845525 ~ 8845993 (-)
G110836 NA non-coding upstream 155963 9000787 ~ 9001428 (-)
G110842 NA non-coding upstream 159714 9004538 ~ 9005206 (-)
G110849 NA non-coding upstream 162473 9007297 ~ 9007532 (-)
G110852 NA non-coding upstream 186311 9031135 ~ 9031449 (-)
wu:fj39g12 nppcl,LOC107744681,LOC107699924,LOC107749278,LOC107685603 other downstream 205272 8633350 ~ 8636222 (-)
G110556 NA other downstream 524809 8312265 ~ 8316685 (-)
G110554 cbx3,LOC107596654,LOC107743152,LOC107744695,LOC107550827 other downstream 539249 8298789 ~ 8302245 (-)
G110544 NA other downstream 624899 8216029 ~ 8216595 (-)
mkxb mkxb,LOC107681765,LOC107566716,LOC107691300,LOC107550429,LOC107747522,LOC107708850 other downstream 749039 8082900 ~ 8092455 (-)
G110911 LOC107749154,LOC107686954,LOC107596765,LOC108428931,LOC108268943,LOC107751895,LOC107656720 other upstream 301106 9145930 ~ 9152183 (-)
G110974 NA other upstream 426147 9270971 ~ 9272605 (-)
gask1a fam198a,LOC107732434,LOC107657576,LOC107751903,LOC107704082 other upstream 1032387 9877211 ~ 9902981 (-)
LOC122361037 cables1,LOC107708521,LOC107747516,LOC107681774,LOC107691165 other upstream 1900752 10745576 ~ 10764305 (-)
LOC122360812 cobl,LOC107746964,LOC107684220,LOC107551210 other upstream 2012696 10857520 ~ 10883424 (-)

Expression


Co-expression Network