LOC122360397


Basic Information

Item Value
gene id LOC122360397
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 11783695 ~ 11784334 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006252803.1
tgtaaaaataaagacaaaggCTTATAGTTCCACATAAAATTTCAGTGTAGGCAGTAATGATGTTTCActaagaaatgaaaatattatttggaaATCCAATTCAGCacagtgcacattttttttgatttagttCTGATTAGTTGCCCTTACTTATCCTTATCCTGGGTCTGTTTTTGCTATCGTGCAAGTATGATCAGATAGAGGTGGCCTTTCAAACTCGTGCACAGTGAGTGTGACATTACACAATCATCTGCCAGCGTGCATCGGTGATAGCGACGACCGCGTGCTCGTGCATCGGCGAAGGAAGTCAAAGGTGGGTCTAGTTCACCCTGGATGAAGAAAAGATTCGAGTTTGGTTTTGATTCATCGGTACTCACCCGAAGAGACGGAGGACCCCGACAGACTGGAGTTGCTTGACGCTGCCATCGCGTCTAATTCACCGAATCCACCCGCTTACTGGCGTCTGTTAGGGCTTGACGGCTCTTCCATCTCAGTCTCCGCTCTCCTGACCCGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006252803.1 True 514 lncRNA 0.46 2 11783695 11784334

Neighbor

gene id symbol gene type direction distance location
cpvl cpvl,LOC107743225,LOC107684544,LOC107745375,LOC107550833,LOC107685540,LOC107596754 coding downstream 3715 11774974 ~ 11779980 (-)
jazf1b jazf1,LOC572950,LOC107743157,LOC108441515,LOC107684540,LOC107550831,LOC107685586 coding downstream 78867 11687295 ~ 11704828 (-)
hibadhb hibadhb,hibadh,LOC107685537,LOC107550829,LOC107744697,LOC107743154,LOC107684541,LOC108441516 coding downstream 121463 11653213 ~ 11662232 (-)
hoxa13b hoxa13b,LOC107743224,LOC107685614,LOC107596755,LOC107744698,LOC107550814,LOC107684536 coding downstream 134826 11646850 ~ 11648869 (-)
hoxa11b hoxa11b,LOC107743198,LOC107596728,LOC107685585,LOC107744726,LOC107684537,LOC107550813 coding downstream 142186 11639005 ~ 11641509 (-)
fkbp14 fkbp14,LOC107596753,LOC107743226,LOC107685615,LOC107550815,LOC107745381 coding upstream 36453 11820787 ~ 11823551 (-)
colq colq,LOC107743227,LOC107745382,LOC107684559,LOC107685587 coding upstream 55567 11839901 ~ 11854994 (-)
hacl1 hacl1,LOC107743162,LOC107685543,LOC107745383,LOC107684560 coding upstream 70687 11855021 ~ 11865183 (-)
ankrd28b ankrd44,ankrd28b,LOC107685545,LOC107745379,LOC107550837,LOC107596646,LOC107684548 coding upstream 84864 11869198 ~ 11885649 (-)
twist1b twist1b,twist1,LOC107684561,LOC107596643,LOC107728521,LOC107550839 coding upstream 201300 11985634 ~ 11987450 (-)
G111625 NA non-coding downstream 2523 11780787 ~ 11781172 (-)
G111623 NA non-coding downstream 9514 11773919 ~ 11774181 (-)
G111559 NA non-coding downstream 117421 11662918 ~ 11666274 (-)
LOC122361126 NA non-coding downstream 213958 11562878 ~ 11569737 (-)
G111516 NA non-coding downstream 239363 11543916 ~ 11544332 (-)
G111639 NA non-coding upstream 34125 11818459 ~ 11819778 (-)
G111661 NA non-coding upstream 158030 11942364 ~ 11943955 (-)
G111668 NA non-coding upstream 199045 11983379 ~ 11983646 (-)
G111680 NA non-coding upstream 248259 12032593 ~ 12035126 (-)
G111688 NA non-coding upstream 291263 12075597 ~ 12076159 (-)
G111490 si:dkey-12j5.1,LOC107738871,LOC107549224,LOC107689883,LOC107717803,LOC108256403,LOC108426361,LOC107593733 other downstream 371918 11410678 ~ 11411777 (-)
LOC122360600 enpp2,LOC107757440,LOC107745056,LOC107697648,LOC107574906,LOC107681346 other downstream 396702 11333175 ~ 11386993 (-)
G111450 mal2,LOC107757438,LOC107571097,LOC107677950,LOC107738940 other downstream 497263 11269620 ~ 11286432 (-)
LOC122360812 cobl,LOC107746964,LOC107684220,LOC107551210 other downstream 900271 10857520 ~ 10883424 (-)
LOC122361037 cables1,LOC107708521,LOC107747516,LOC107681774,LOC107691165 other downstream 1019390 10745576 ~ 10764305 (-)
LOC122361049 c16h2orf66,LOC107743229 other upstream 81346 11865680 ~ 11867315 (-)
rxrbb rxrbb,rxrba,LOC107596638,LOC107581542,LOC107752838,LOC107743171,LOC107566635 other upstream 579451 12363785 ~ 12378449 (-)
zgc:92606 zgc:92606,LOC107724707,LOC107549485,LOC107598403,LOC107672985,LOC107744286,LOC108432344 other upstream 1869726 13654060 ~ 13683909 (-)
G112478 NA other upstream 2450220 14234554 ~ 14301619 (-)
dicp3.3 NA other upstream 2713929 14498263 ~ 14503136 (-)

Expression


Co-expression Network