LOC122360619


Basic Information

Item Value
gene id LOC122360619
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 11261627 ~ 11264238 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006252822.1
agctggaacctgggaacactcctcataaaacacaatgtacttgttgCATTGTAAAAAGATTgacatctacgctaatattagtcgtttctttcttattctgtttctcggTTTGTAACTCTGTAATAGTTGGCTTAGTTTTGTGAATTCATGTGTCTATCCTTTCTTCCAGGTTGGATAGCAGTAGCAGAGTCTCAGTGGCGTGCCTGAGTATGCAGACTAGATCACGAGAGAACTTTTGAGTAAGAAAACAGACTTGGGTTAGGTACATAACACAAAGCAACTGCAAGACCAGACAATGAGAGTGTGGAGTGAGCGTGTTCTTATGTAGAGCTTGATTGGCATCAACAGGTGAGGGGCATTCACTGATAGGAGTACAAGTGTAAGTGCAGAGGCAGCTCAATTGGTGACTGTGtaaaaaaccattttaaaattaattacccATAATATGTCATTAAAATTTAGTGATGCATGGCAAGATATATAAACTATTGTTGCACTGAATTACATCTTAGTCTTTGTCTTCTGTGGTGTAATGGAAGAGGCTAGACACAAAggtaaaacaaataatgtttattgcacaGATGGTTCAACAGAGTAATGCACAAGTATTACAGTCTTTGGAGATCTTTCTTGGGAGTTGGAGCAGAGAATAACTGGGTATCTTGTATATATTGGTATTCAGGAGAACAGGAGACACATTGGGGGAGCACAAACACCTCAGTATGTCGACAACTGGAGAGAACTTGGGAGACATGGAGCTTGGGAGACTACGGATAAACACAAGAAGACCTCATGGAAcaatcacacaaacaaactgCAGAAGTTTATTACAAAAAGGAGTTTCAAAAGAGTCCCCTCTCCCATCTGCGGTCTTAAAGCTATTAATGATCAAATAAGGACCGACAGTGCTCAAATAGTTTGGACCTATGTCCTGGCAAAGAGGATGGTTGCTCAAAACGCTCCTGTTCATCAAAATTAAACCAATCAGCCCTATGGCGCGACACCTTGGAAAACAAAGTGAAGCTGAATTGATCACAAGACCGGGTCTTTGTATTAAGGAGAACCTTGTCGTCCAGTGAAACTGTGCAATGCCGCAGGACACATTAATAATTCATGATTCTGCTTCCTATCTGCTTGGGACTTTAACCATTCTTACATACAACAAACtgaacatttcaataaataatattaaagcacACATGCTATGTTATAATACACTTGCTATGCCTTATATGTGCTTGTTGGAACTTAATCgatgcattatacatttttacctCTATGAATTAGTGTAATCATTATTTTAGTAGGATATATTagtaatgtactgtatgtacaaGAGATGCTGTTTCTGCTCTTGAAAGAAAGCTAAGCTTATTGGCTACCACTTGGAGTGAGTGAAATGTCAGAATTTGTGTTGTGTACATATCATGACACTTTCTAAAGTTATTGAccaaaagttgcaaaaaaagaaacagcaatAGTATGGAAACAGCAATAGCGTCTGATTGGAGGACTGTCCAAATCTTCTCCTTAAAACTGCACCGTTTGAACAGAGACTTTGCTTTTTAAGTATGCTTTTAGCTGGCTTCTAAGTTTGCTTCTAGCCCAACTTTATAGTTATGCTGTTAACCACAATTTTAACATCAGGGCTTTTAACCTGCTCGCTTTTAGCCACCAGCATTTTAGCTGATGGAGCTTGCTTTTAacaccgcccaaatgtttacgcaaAGAAGGCGGTACTATTATTCttgctgtagtgttgctgctgTCGCTATGTGCTAGATGTGCTGTTTGACGTTTTGTAAACtactttgtgcttccaaaagaggacacaactaaaAATAAGTGGTTACTGATTTCAACTCTGTTTTAGTGCAGTTCAGCCCAAATGTTAGAGggtgtttaatgcatttaagtaGGACTGTTTTCTTAAAACCAAAAGAGCAGCCTATGTTGGCAATACACAGAAACTATATTCCAACTGTACAAGGACAGTCTATAGCGCTTCTCACTCAAAACGTTTAAGtaagttttcttattaaaataacccACTACTTACTATTTGAACTATTTAAACATGAGTTACATTGAGCGGTAAAATGTAGTGCTGTTTGTCATTTCCCCAGTCACAAATGCAGCCATGGTGTTTACATGGTGCAACGCATAAAGAGAAAGGCTTTTCACACTGTGCTTAACCCCGGGTTATCATCAATCTAAGCATCGTTTTTTAATACCGATAAAGGCTTGTTTCACACCTGAAAGCAGTGCAAGGACCACAATGTATCCGGGGTTATGAAACCCTGCTTGGAGCAGGGTTAGCACTGCATTTGTGGTGTTAACCCCACATTGTGGTGATAAGTTTGTTCAGTGTGAAACGGTAAGGTGTTTGCTTGTTGCTGCTGAACCCttggcagccaatcagaaactgAACAGCAAAGCTTGTGTCACGTCAGTAACTGAAAACGTGCTTCG

Function

GO:

id name namespace
GO:0010942 positive regulation of cell death biological_process
GO:0043065 positive regulation of apoptotic process biological_process
GO:0043068 positive regulation of programmed cell death biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006252822.1 True 2472 lncRNA 0.39 2 11261627 11264238

Neighbor

gene id symbol gene type direction distance location
LOC122361032 LOC107746978,LOC107684223,LOC107551206,LOC107704083,LOC107751909,LOC107601659 coding downstream 438438 10817891 ~ 10823189 (-)
LOC122361028 cabz01093075.1,LOC107601667,LOC107751875,LOC107746976,LOC107704092,LOC107684228,LOC107551204 coding downstream 450610 10808337 ~ 10811017 (-)
colec10 LOC107738939,LOC107574455,LOC107677951 coding downstream 673909 10571751 ~ 10587718 (-)
mal2 mal2,LOC107757438,LOC107571097,LOC107738940,LOC107677950,LOC107683116 coding downstream 691830 10553160 ~ 10569797 (-)
LOC122361025 LOC107757443,LOC107691877 coding downstream 839348 10408015 ~ 10422279 (-)
LOC122360214 LOC107752837,LOC107662667,LOC107581612 coding upstream 173135 11437373 ~ 11453509 (-)
LOC122360822 LOC107596715 coding upstream 228861 11493099 ~ 11501213 (-)
skap2 skap2,LOC107743153,LOC107684555,LOC107685583 coding upstream 334093 11598331 ~ 11614258 (-)
hoxa2b hoxa2b,LOC107685611,LOC107684556,LOC107550809,LOC107743221,LOC107744722,LOC107596758 coding upstream 355275 11619513 ~ 11630905 (-)
hoxa9b hoxa9b,LOC107743222,LOC107684557,LOC107744723,LOC107685612,LOC107550810,LOC107596757 coding upstream 364861 11629099 ~ 11633344 (-)
G111437 NA non-coding downstream 579 11260745 ~ 11261048 (-)
G111421 NA non-coding downstream 35554 11225782 ~ 11226073 (-)
G111420 NA non-coding downstream 36218 11225186 ~ 11225409 (-)
G111393 NA non-coding downstream 101571 11159839 ~ 11160056 (-)
LOC122361039 NA non-coding downstream 336863 10924115 ~ 10924764 (-)
G111452 NA non-coding upstream 1765 11266003 ~ 11266214 (-)
G111453 NA non-coding upstream 2358 11266596 ~ 11266825 (-)
LOC122360676 NA non-coding upstream 215868 11480106 ~ 11481227 (-)
G111508 NA non-coding upstream 223444 11487682 ~ 11488827 (-)
G111516 NA non-coding upstream 279678 11543916 ~ 11544332 (-)
LOC122360812 cobl,LOC107746964,LOC107684220,LOC107551210 other downstream 378203 10857520 ~ 10883424 (-)
LOC122361037 cables1,LOC107708521,LOC107747516,LOC107681774,LOC107691165 other downstream 497322 10745576 ~ 10764305 (-)
gask1a fam198a,LOC107732434,LOC107657576,LOC107751903,LOC107704082 other downstream 1358646 9877211 ~ 9902981 (-)
G110974 NA other downstream 1989022 9270971 ~ 9272605 (-)
G110911 LOC107749154,LOC107686954,LOC107596765,LOC108428931,LOC108268943,LOC107751895,LOC107656720 other downstream 2109444 9145930 ~ 9152183 (-)
G111450 mal2,LOC107757438,LOC107571097,LOC107677950,LOC107738940 other upstream 5382 11269620 ~ 11286432 (-)
LOC122360600 enpp2,LOC107757440,LOC107745056,LOC107697648,LOC107574906,LOC107681346 other upstream 68937 11333175 ~ 11386993 (-)
G111490 si:dkey-12j5.1,LOC107738871,LOC107549224,LOC107689883,LOC107717803,LOC108256403,LOC108426361,LOC107593733 other upstream 146440 11410678 ~ 11411777 (-)
LOC122361049 c16h2orf66,LOC107743229 other upstream 601442 11865680 ~ 11867315 (-)
rxrbb rxrbb,rxrba,LOC107596638,LOC107581542,LOC107752838,LOC107743171,LOC107566635 other upstream 1099547 12363785 ~ 12378449 (-)

Expression


Co-expression Network