LOC122360716


Basic Information

Item Value
gene id LOC122360716
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 6685500 ~ 6688903 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006252833.1
GGAAGAAGCACTGGGCAGAAAATAGGATGCAGCAAGATGAATGTGtaaaggaaaaatgaaaaaagttgcGTTTGGTGGGAGGCGCTGCCACCCCGCCGTCTACAGAATGAGAGAGAGCGGAGGGGTGTTTCGTTTGGCTGCTAATCACCTGGAACACACCGGCTCACCTTCAAAGCGCGGCGGAGAAACCCTTACCTGGAGCGCGCAAGAGCTAGCATGCGCCGGGCTTAGCGGATCTCACGTGTGTCTTGTCTGGACGCGTGCTGAAGGAGTCTTTAATACCGAGCTCTGGTTAATGCTCTTCTGCTGTGTTTCAAAGCGTTTCCTTAAGTGCTGCATAATTATATAGACACGATATAATCAAGTACTTTTACTGATGTGAAATGGGTGGAAACAAGCAGTCGAAGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006252833.1 True 409 lncRNA 0.49 3 6685500 6688903

Neighbor

gene id symbol gene type direction distance location
irx1a irx1a,LOC107758835,LOC107558645,LOC107726233,LOC107554507 coding downstream 119311 6561850 ~ 6566189 (-)
rprd2b LOC107757337,LOC107558642,LOC107689000,LOC107689168,LOC107559016,LOC107726232 coding downstream 405923 6263504 ~ 6279577 (-)
tars2 LOC107558643,LOC107689001,LOC107726246 coding downstream 423503 6248919 ~ 6261997 (-)
celf3b LOC107559029,LOC107713913,LOC107689166 coding downstream 785283 5877048 ~ 5900217 (-)
cers2b cers2b,LOC107688996,LOC107726244,LOC107689165,LOC107558627 coding downstream 812442 5853476 ~ 5873058 (-)
sox4b sox4,LOC107732138,LOC107722246 coding upstream 699813 7388716 ~ 7392318 (-)
cables1 cables1,LOC107708521,LOC107747516,LOC107681774,LOC107691165 coding upstream 1239626 7928529 ~ 7951085 (-)
gata6 gata6,LOC107681823,LOC107708510,LOC107747517,LOC107691181 coding upstream 1288726 7977629 ~ 7984289 (-)
mib1 mib1,LOC107681781,LOC107708480,LOC107550435,LOC107747519 coding upstream 1316815 8005718 ~ 8053185 (-)
LOC122360189 LOC107691296,LOC107550438,LOC107747520 coding upstream 1378672 8067575 ~ 8074304 (-)
G110227 NA non-coding downstream 476832 6139394 ~ 6208668 (-)
G110224 NA non-coding downstream 477695 6137107 ~ 6207805 (-)
G110223 NA non-coding downstream 481611 6201389 ~ 6203889 (-)
G110199 LOC107726242,LOC107689176,LOC107713897 non-coding downstream 490866 6191010 ~ 6194634 (-)
LOC122359843 NA non-coding downstream 504992 6177403 ~ 6180508 (-)
G110307 NA non-coding upstream 400823 7089726 ~ 7091063 (-)
G110315 NA non-coding upstream 505635 7194538 ~ 7195316 (-)
LOC122360226 NA non-coding upstream 605279 7294182 ~ 7296238 (-)
LOC122360224 NA non-coding upstream 642245 7331148 ~ 7386350 (-)
G110405 NA non-coding upstream 704163 7393066 ~ 7393325 (-)
LOC122359836 adamts16,LOC107757336,LOC107726256,LOC107689003,LOC107657842 other downstream 346004 6279709 ~ 6339496 (-)
LOC122359839 LOC107689176,LOC107726242,LOC107689019,LOC107559018,LOC107559017,LOC107558630,LOC107713911 other downstream 501367 5902577 ~ 6184133 (-)
G110215 NA other downstream 585573 6096675 ~ 6099927 (-)
G110208 adamts16,LOC107757336,LOC107558631,LOC107689003,LOC107726256,LOC107657842,LOC568792 other downstream 650723 6029208 ~ 6034777 (-)
ndufa3 ndufa3,LOC107558639,LOC107713918,LOC107559056,LOC107726249 other downstream 866882 5817040 ~ 5818618 (-)
G110303 NA other upstream 393059 7081962 ~ 7083524 (-)
LOC122360222 nrsn1,LOC107730905,LOC107758834,LOC107558647,LOC107663792 other upstream 506587 7195490 ~ 7201381 (-)
cdkal1 cdkal1,LOC107722243,LOC107732137,LOC107663002 other upstream 752995 7441898 ~ 7618596 (-)
LOC122360680 LOC107749122,LOC107702023,LOC107751904,LOC107564882,LOC107661990,LOC107570991 other upstream 1139312 7828215 ~ 7830750 (-)
mkxb mkxb,LOC107681765,LOC107566716,LOC107691300,LOC107550429,LOC107747522,LOC107708850 other upstream 1393997 8082900 ~ 8092455 (-)

Expression


Co-expression Network