LOC122360778


Basic Information

Item Value
gene id LOC122360778
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 7988950 ~ 7992867 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006252839.1
CCGCTCGCTACAAGCAGGCCGATTGTTCCTAGAGATGGTGTTTGAAGTGAGCAAGGTGAGAATGTCTGCTCAATGCTGTTTTTTGTCAACAGCTCAGGATCTCCCTGTCAGCTTCTGCAGAAGCTTCGGCGGTCCAAGGTAACAGCATGCATTGTGTGGAAAACGGCATTCTGTTCGACGTTTCCTTTTGTGTCGTATGAAAATGTTTTCGCCTCTGCATCCTCCCCTACCTCAGGTTTGCGTACGTGCCAAAATCAAGCGCAGAACTCCGATCTCCCACGCCTCTCAAAACCGCTTCACAATGTTAGCAGATCTGCCTGATACGACTCCCTTTCTGAGGTTCCCGCTTCTTCAAGACCTTGGATCCCTTTGCAAAAACAAGCGCAGCAAAAACCAGTAGCACTTCAGCCTGGACACTTcacttttttgttgtcgttttgtTTTAAACGGGACGTAAAAAGAGCAGAATGTAAAAAAAGCCCAATCAATCCGATACGAGAGGGAGTGACACGTTTTAAGTATTATAAAGTATTAcatctttcattctctctttcttttttccgaAGCAGGGAGCAGATCCAAACTCAGCATGAGTAAACAGTGAGTCCTTCTCTGCCTGGTACAGAGCTGGTCCTGAAAGAATGATCTCCATCTGACTGTTTGATGACCCGATAAAAACATAATTGAGAATGTATTTTCTGGCTAAACAAACCCTGGTCATACCACGGAAACTATAGGCTAGACAACTCCATTGTGTGTACGTTTTCAAACACAAGGAGCATGTTTAAGTTCACGGCTCGACAACACcaggattgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcatggagGTCATGAGGACAAGATGAATTTGTACAGGAGAAACAGTGCCCTATCATGGTGGCCATGTTTCTCGGGATCTCACTCCATTGGAGCAGAGGGTGATCTTATCATAACTAAAGTGCACAGCTTTGTTTGCCAGAcaaagaaatggaaagaaaactGTCTGAGGGCACGGCAGCATTTTTCCATGTATGCTGAAAGAAAGTGATAACCTGAAAAAAATCGAAAAGGGTTTTAATCAAGTAAAAAATACGATTTGATGTTGCTGAATCAATCccaaatatgtttaatttataaaagcaaaaacatttttatgggtTAAATGAGGCACAAATAGCCTTTTAATGGCAGGTTACcaaattttttacagtgcagatgTGAAGGGTAAAGTCAGAACAAAAACTTCAAGGTCTCAAAGCAATTCTCTCTTATATGAGTTATTAAAGGATATATTCCTGCTCGggtgtcatttattcattctcatATCGATCCAAACCTATGACTTGCTTTAAATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006252839.1 True 1367 lncRNA 0.42 3 7988950 7992867

Neighbor

gene id symbol gene type direction distance location
gata6 gata6,LOC107681823,LOC107708510,LOC107747517,LOC107691181 coding downstream 4661 7977629 ~ 7984289 (-)
cables1 cables1,LOC107708521,LOC107747516,LOC107681774,LOC107691165 coding downstream 37865 7928529 ~ 7951085 (-)
sox4b sox4,LOC107732138,LOC107722246 coding downstream 596632 7388716 ~ 7392318 (-)
LOC122360792 NA coding downstream 1298724 6650949 ~ 6690226 (-)
irx1a irx1a,LOC107758835,LOC107558645,LOC107726233,LOC107554507 coding downstream 1422761 6561850 ~ 6566189 (-)
mib1 mib1,LOC107681781,LOC107708480,LOC107550435,LOC107747519 coding upstream 12851 8005718 ~ 8053185 (-)
LOC122360189 LOC107691296,LOC107550438,LOC107747520 coding upstream 74708 8067575 ~ 8074304 (-)
mpp7b LOC107681820 coding upstream 112359 8105226 ~ 8143954 (-)
adipoqb adipoqb,adipoq,LOC107681756,LOC107755695,LOC107566714,LOC100653481 coding upstream 202234 8195101 ~ 8200339 (-)
LOC122360799 tmtopsa,LOC107573386,LOC107550426,LOC107653523 coding upstream 246464 8239331 ~ 8256537 (-)
LOC122360975 NA non-coding downstream 28575 7958881 ~ 7960375 (-)
G110449 LOC107708546,LOC107681784,LOC107691124,LOC107566457 non-coding downstream 84357 7849679 ~ 7904593 (-)
G110452 NA non-coding downstream 87942 7883932 ~ 7901008 (-)
G110453 LOC107681784,LOC107708546,LOC107747514,LOC107566457,LOC107691124 non-coding downstream 99655 7887795 ~ 7889295 (-)
G110437 NA non-coding downstream 195563 7792807 ~ 7793387 (-)
G110546 NA non-coding upstream 242041 8234908 ~ 8235793 (-)
G110548 NA non-coding upstream 244891 8237758 ~ 8239176 (-)
G110753 NA non-coding upstream 554915 8547782 ~ 8551552 (-)
G110773 NA non-coding upstream 597031 8589898 ~ 8590634 (-)
G110807 NA non-coding upstream 852658 8845525 ~ 8845993 (-)
LOC122360680 LOC107749122,LOC107702023,LOC107751904,LOC107564882,LOC107661990,LOC107570991 other downstream 158200 7828215 ~ 7830750 (-)
cdkal1 cdkal1,LOC107722243,LOC107732137,LOC107663002 other downstream 370354 7441898 ~ 7618596 (-)
LOC122360222 nrsn1,LOC107730905,LOC107758834,LOC107558647,LOC107663792 other downstream 787569 7195490 ~ 7201381 (-)
G110303 NA other downstream 905426 7081962 ~ 7083524 (-)
LOC122359836 adamts16,LOC107757336,LOC107726256,LOC107689003,LOC107657842 other downstream 1649454 6279709 ~ 6339496 (-)
mkxb mkxb,LOC107681765,LOC107566716,LOC107691300,LOC107550429,LOC107747522,LOC107708850 other upstream 90033 8082900 ~ 8092455 (-)
G110544 NA other upstream 223162 8216029 ~ 8216595 (-)
G110554 cbx3,LOC107596654,LOC107743152,LOC107744695,LOC107550827 other upstream 305922 8298789 ~ 8302245 (-)
G110556 NA other upstream 319398 8312265 ~ 8316685 (-)
wu:fj39g12 nppcl,LOC107744681,LOC107699924,LOC107749278,LOC107685603 other upstream 640483 8633350 ~ 8636222 (-)

Expression


Co-expression Network