G11423


Basic Information

Item Value
gene id G11423
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 17727878 ~ 17729245 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU12608
AATCTTTCTTCCATAGAATCTTAAACAATTTGTGAGAGACATATTTCAGAGCGTGAGATGCTCAGGTGAAGCCCTTTGCCAAGCAGCAAAGGTCCTGAATGGGGTGCGTCTAAACACAGATCCAAATAACTTGATATATAGGCATCTGTTCGCCTATGCAGATTTAACCGGGCACCGGAACTGCAGCATTACAGCTTCAGAGGAACGTCCAGTGAAGGTTTTTCTCGAAAATATCAAAGACTGCTGCCAAACACTTCTCTCTAAACTTGTATCACATCCAAAAAGAGTGAAATGACCTTAGACTTACAGCTTATACTATATTTTTGTATGTTTTTGTGATATTTATATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU12608 True 349 lncRNA 0.37 3 17727878 17729245

Neighbor

gene id symbol gene type direction distance location
CI01000000_17672091_17673742 MSX2A coding upstream 52736 17671672 ~ 17675142 (+)
CI01000000_17644414_17655141 CPEB4 coding upstream 72130 17644353 ~ 17655748 (+)
CI01000000_17642401_17643835 NA coding upstream 84039 17642199 ~ 17643839 (+)
CI01000000_17540827_17545953 DPF2L coding upstream 181733 17540827 ~ 17546145 (+)
CI01000000_17507574_17510080 MDP1 coding upstream 216983 17507574 ~ 17510895 (+)
CI01000000_17729584_17730495 NA coding downstream 339 17729584 ~ 17730599 (+)
CI01000000_17831876_17854247 NR3C1 coding downstream 101515 17830760 ~ 17854433 (+)
CI01000000_17858551_17862300 FGF1A coding downstream 127563 17856808 ~ 17862320 (+)
CI01000000_17897786_17904428 MARS2 coding downstream 168483 17897728 ~ 17904569 (+)
CI01000000_18144240_18154922 NA coding downstream 413864 18143109 ~ 18155084 (+)
G11413 NA non-coding upstream 23328 17704335 ~ 17704550 (+)
G11251 NA non-coding upstream 144965 17550708 ~ 17582913 (+)
G11314 NA non-coding upstream 311783 17415856 ~ 17416095 (+)
G11309 NA non-coding upstream 380326 17347285 ~ 17347552 (+)
G11057 NA non-coding upstream 664731 17062923 ~ 17063147 (+)
G11435 NA non-coding downstream 25345 17754590 ~ 17759604 (+)
G11441 NA non-coding downstream 41607 17770852 ~ 17771247 (+)
G11442 NA non-coding downstream 43208 17772453 ~ 17772804 (+)
G11443 NA non-coding downstream 66865 17796110 ~ 17796323 (+)
G11484 NA non-coding downstream 146067 17875312 ~ 17875608 (+)
CI01000000_17339270_17345013 CXCL14, CXL14 other upstream 381678 17339154 ~ 17346200 (+)
G10201 NA other upstream 1797316 15930266 ~ 15930562 (+)
G9201 NA other upstream 3492937 14215024 ~ 14234941 (+)
G7522 NA other upstream 5548870 12178369 ~ 12179008 (+)
G7514 NA other upstream 5590870 12136522 ~ 12137008 (+)
G11465 NA other downstream 154708 17883953 ~ 17887462 (+)
G11521 NA other downstream 303494 18032739 ~ 18164112 (+)
G11801 NA other downstream 951622 18674116 ~ 18745376 (+)

Expression


Co-expression Network