G120675 (ywhaqb,LOC107733143,LOC107674035,LOC107697768,LOC107592764,LOC107752793)


Basic Information

Item Value
gene id G120675
gene name ywhaqb,LOC107733143,LOC107674035,LOC107697768,LOC107592764,LOC107752793
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056715.1
NCBI id CM032084.1
chromosome length 22256391
location 12873851 ~ 12881338 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU178328
ttggtttataaaatgtaattaagcaTGTTACATAACATACATAGggcataaaacattttcacaaggCTTCTGTGAGACTAAAATTcatgggaaataaaaaaaaaaaaaaagaaaagaaaaagagaagaaaaaaaaatcaaagtcaCATACACAATAGAATAAAAGACATAAAGGAGAAACAAAACATGTAATAGTGGTCGAATCTATAATGACACTCTCTGGACaatcacacacacctgtgcacaACGCACGGAAAAGTACTGAACAGAACTTTAATATTGGCAATATGGCATTTCTCATTCCAGTGTTCTGGACATACACAGGCAATGTTATTTGCCACCGACACAAATTCACCACTAGCATTCAGAATCAAGATACTCGTTCTTGGTTTCTATCATTCATAACATGCGTTATGTGAAGCTAATTTCTAGAGTGGGTCTTTTATACATGACCATCAAAACCATATTACCAAACTGTGCCACAGATTGTGTCAGAATTGGTCTGCATGCTAGTGGGGTACTGCTAACCAAACAGTTTCACTTTTAACACAGCATCactaaacaaatcaaattaaatatgccCTAAGTCGTCTTACAGATGGTTTCAAATTTCTATGGATGATTTCGATTTCCGTAAAATAAAAGCGAAGGGAACACTAAACAGGCCAAAATCAAGtgaaaaacagtaaatatattattaaaccgTTTATAAACTGAGGACCGTCAGATACTACATACCACCGCAGATGCTAATATTTCCAAGTAAAATCTGAAATGCAGCTTGAAACGTACGCCATTTCGacaagtgtctttttttttgtttttttttatttccatatcgAACGATCTAAAGCGTGACTGACCACTGCTTTCAGTGGAAGTGCACAACCCGTGGTAGTGCTGAGGTGAGACAGGTAAGAGTGTTAAAGTACAAGATACAGTAGGTGTATATGGTTatctaaatgcttttaatatccCTGCAATTACTTTTTAGTCTCAGACTTACCTGTGATGAAATGCATGTCcttacttttaatttattcattaatttattttccattaactattactttaagattatgtttgtataaaatgaCACTAGTCATACTTCTCTACAGCAGAAACCTACTTATGGAAGGCCAAGACAGACAAACTAAGGAACAGGGTTTCTCCCcaaatatctttcttttcttgtcCAAAAGCTGCACCGTGAAAAgactaaatgatttttttttttttttttctcataaacaGCTCTTCATTAATCATGGGTTTGATCTTTTACTGGAGGAATTCTGGCATGGAGTGATAAGGAATGGAGATGTGTAAAAAGGTCATTTTCTTTGTTGTCGTTTTCTTTGTGGTCTAGTTCTCTCCTCCCTCGCCTCCTTCTCCCTCTGCAGTTTCTTGTCGTTTCCTTCGGTCTTCTGCTCGATGCTGGAGATGACCCTCCAGGCAGACCTCCGGGCGCCCACCACATTCTTATAGGCGACAGATAGCAGGTTTCTCTCCTCGTTAGACAGCTCGGACCCAGCTTCGGTCACTGACTTCATACAGGTCGCCATATCATCATAGCGCTCGGCCTGCTCGGCCAGCTTCGCCTTCTGGATGAGCTCTGTTCTGTCCATCCTGCTGCGTTTCTTTAAGTCTGTGAGTGTTTCTAGGTCTATGGGAAACTCGACTGATCAATGGAGGGGAATGAACCGCTGCTTAATCCCTGAAGAGgctgaaagaagaaaatgacaGTCAGACTCCATATATTGAACAGAGAACAGTATTTGTGAATCTTTTATGCGCACCGATCGTTCCATTTAATACCATACATCGACG

Function

symbol description
ywhaqb Predicted to enable monooxygenase activity. Is expressed in several structures, including nervous system; optic vesicle; pleuroperitoneal region; solid lens vesicle; and tail bud. Human ortholog(s) of this gene implicated in transitional cell carcinoma and vulva squamous cell carcinoma. Orthologous to several human genes including YWHAQ (tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta).

NR:

description
PREDICTED: 14-3-3 protein zeta/delta-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU178328 True 1829 lncRNA 0.39 2 12873851 12881338

Neighbor

gene id symbol gene type direction distance location
grhl1 grhl1,LOC107752795,LOC107697767,LOC107592763,LOC107674126,LOC107733199,LOC107594788 coding downstream 28144 12827470 ~ 12845707 (-)
LOC122361666 LOC107733171,LOC107752798,LOC107592762,LOC107697764,LOC107674069,LOC107594789 coding downstream 141472 12728233 ~ 12732379 (-)
abraxas2 LOC107719448,LOC107697762,LOC107561552,LOC107594794,LOC107674115 coding downstream 425553 12442195 ~ 12448298 (-)
dtd2 dtd2,LOC107561538,LOC107697760,LOC107719450,LOC107561550,LOC107733196,LOC107674124,LOC107594854 coding downstream 473442 12399350 ~ 12400409 (-)
pomt2 LOC107674120,LOC107733198,LOC107719451,LOC107561547,LOC107594797 coding downstream 475265 12392306 ~ 12398586 (-)
xkr5b LOC107592805,LOC107752812 coding upstream 29233 12910571 ~ 12919106 (-)
cgref1 LOC107697770 coding upstream 42058 12923396 ~ 12927066 (-)
kcnk2a LOC107697693,LOC107752820,LOC107674044,LOC107733102,LOC107594834 coding upstream 52425 12933763 ~ 12952568 (-)
cenpf cenpf,LOC107592772 coding upstream 81250 12962588 ~ 12976926 (-)
smyd2a smyd2a,LOC107592771,LOC107752785,LOC107697773,LOC107733184,LOC107594786,LOC107674111 coding upstream 95731 12977069 ~ 12987892 (-)
G120674 NA non-coding downstream 17924 12853888 ~ 12855927 (-)
G120665 NA non-coding downstream 130261 12740435 ~ 12743590 (-)
LOC122361537 NA non-coding downstream 380418 12483626 ~ 12493433 (-)
G120588 NA non-coding downstream 435013 12434607 ~ 12438838 (-)
G120573 NA non-coding downstream 464620 12409030 ~ 12409231 (-)
G120756 NA non-coding upstream 196463 13077801 ~ 13081340 (-)
G120762 NA non-coding upstream 209742 13091080 ~ 13091370 (-)
G120767 NA non-coding upstream 269670 13151008 ~ 13151338 (-)
G120843 NA non-coding upstream 292610 13173948 ~ 13174191 (-)
G120833 NA non-coding upstream 298736 13180074 ~ 13183449 (-)
G120660 LOC107752798,LOC107592762,LOC107697764,LOC107733171 other downstream 53183 12817192 ~ 12820668 (-)
LOC122361973 LOC107592804,LOC107697765,LOC107752799,LOC107674033,LOC107733077 other downstream 81982 12663239 ~ 12791869 (-)
lin52 lin52,LOC107594798 other downstream 482303 12381281 ~ 12391548 (-)
evla evla,LOC107719466,LOC107697733,LOC107563375,LOC107594809,LOC107733132,LOC108425620 other downstream 929123 11915468 ~ 11944728 (-)
alkal2b fam150bb,fam150b,LOC107674025,LOC107733108,LOC108425626 other downstream 1069066 11800488 ~ 11804785 (-)
LOC122361883 LOC107592775,LOC107752809,LOC100537549,LOC108433935,LOC107733136,LOC107674087 other upstream 311839 13193177 ~ 13200692 (-)
kidins220a id2a,id2,kidins220,LOC107579075,LOC107707685,LOC107553286,LOC107655320,LOC107752760 other upstream 1100209 13981547 ~ 14040211 (-)
LOC122361652 LOC107679745,LOC107752800,LOC107594718 other upstream 1828153 14709491 ~ 14733577 (-)
myo6b myo6b,LOC107741840,LOC107594692,LOC107679792,LOC107600844,LOC107666253 other upstream 1910848 14792186 ~ 14839813 (-)
ptgr2 ptgr2 other upstream 2129488 15010826 ~ 15026415 (-)

Expression


Co-expression Network