LOC122361883 (LOC107592775,LOC107752809,LOC100537549,LOC108433935,LOC107733136,LOC107674087)


Basic Information

Item Value
gene id LOC122361883
gene name LOC107592775,LOC107752809,LOC100537549,LOC108433935,LOC107733136,LOC107674087
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056715.1
NCBI id CM032084.1
chromosome length 22256391
location 13193177 ~ 13200692 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU178546
CACACTTCTTCTGGACAATTTAAGTCTGTTCCAGAATGCTATCTCTGCTGTGCGCTTTCTTACTCTGGGCAGCATGGCCCCAGGTTCCTGCTGTCAAAACCAAAGACGCTGCTGAAGACGCTTCTCAGACTCATCGAGTTAGCAGCGGCCTAATGCAGTGTGGGGAATACAGCAATGAAGTGATGCCAAACGGACAGTGTCGCTTAATAGCCACATTACCTCAGCTGGAGGAGCAGAGGTGCCCGGACATGTTCCGCTGTACAGACGAGGTCTCTTACTGGCTGCGTGAGAACGAAGAGCGCAAGCAGCAAATGCAGGACCTGAAAGAGACCATCTCAGAGCTTCAAGAGGAGCTGAGGAATCACAGGCATCGCATCAAAGTGCTTGAGCTGCAGCGCGAGGAGAAGTAC
>XM_043262982.1
gccttttacTCCTATTCATGCGGTTTTCAGGGCTTTGAAAACCTTTTGTACCATAAATTTTTGAGaacaataatgtaataacaaTGTTGCAAGTATAAAGAGTGAACATATTCTCTTTacacattttagtcattttccaaaaggtataaaaaatatattttattattatcttcgGGAGCACAAATGGTATTTTTGACGCATTCTGATGGCTGTGCGATTCGTCTGTTGAAGACAcacgttaaaaaaaacagtttttaaataaaaaatacatttgaaaaatataaatactcaAAAATGAATTGGTTAATTGATTGTGGCAAACTGCAAAAATGCTTCTTTCTTTATCGTACGTCATGTCAGCATTTTTTGCATCATGACCCCCCCCGCAACCATACACATGGAAAATTCAGAAATATTGCATGTCTGAACTGCATTTTAACGTATTGAGTAAATGAATGAGCATCATGTCGTTGATCCATCCATTCTGTTCTTTCTTTACACAGAGTGCTAGTTTGTTGAGAACATCTGGCAAATGTCCGACCAATCAGCTTTCTCCATCTCACACACTTTTGATCTATCTAGATCTATTGACAGTGTTAAACCATGGGGAAATAAACTTCACCAGTCTGAGGACCCAAACAGCTTTCAGGGTCTGATGAGAATTTCACACTTCTTCTGGACAATTTAAGTCTGTTCCAGAATGCTATCTCTGCTGTGCGCTTTCTTACTCTGGGCAGCATGGCCCCAGGTTCCTGCTGTCAAAACCAAAGACGCTGCTGAAGACGCTTCTCAGACTCATCGAGTTAGCAGCGGCCTAATGCAGTGTGGGGAATACAGCAATGAAGTGATGCCAAACGGACAGTGTCGCTTAATAGCCACATTACCTCAGCTGGAGGAGCAGAGGTGCCCGGACATGTTCCGCTGTACAGACGAGGTCTCTTACTGGCTGCGTGAGAACGAAGAGCGCAAGCAGCAAATGCAGGACCTGAAAGAGACCATCTCAGAGCTTCAAGAGGAGCTGAGGAATCACAGGCATCGCATCAAAGTGCTTGAGCTGCAGCGCGAGGAGAAGTACGGAGTAAACTCGTCTTTGGAGCATCGCTTCCACATGCTGCAGGACATCTATGAGGAGGCCAATGCACTGCTGCACATCCACGGATCGCTCATATATGACATGCAAACACAGATTCGCAACCTCACTATGATCGTAGAGCGAGTGAGGCGCAATCCTGGCTGTATGATCAATATCATCCGCACAAGCCCGCTCCTCGGCTCTCAAGATACCCTTCACCCAGAGGTTCAGCATGTAAGGAACTGTCCAATTGACTGTGCGTCGCTGTACTACAACGGAGTCCACAGATCTGGGATTTTTACTGTTGTGCCTTCAATGGGATCGACTCCTGTAGAGGTTTATTGTGATATGGAGACTCAAGGAGGAGGATGGACCATGTTTCAGCGTCGACAGGACGGAAAAGTTAATTTCAATCGTAAATGGACGGAGTACAGGGACGGCTTCGGAGAACTGCACGCGGAATTCTGGCTCGGAAACGATCACATTCACGATATCTCCAGCCAGGGAGAGTATTCCCTTCGCATTGATCTCGAGGACTGGAATGGCAAGCACAAACACGCATTGTACCAGAACTTCTgGATTGAGAACGAGGAGAACCTCTACCGTCTCCATGTATCGGGATTCAGCGGTACAGCTGAAGACTCGTTTGGCTGGTACCACGACAAGCAAAGCTTCAGCACTCCAGACACAGGTGACATCTGTGCTGAGATATCTCACGGAGGCTGGTGGTACCATCAGTGCTTCTTTGCCAACCTCAATGGAGTGTATTATAAGGGGGGGCGGTACTCTGCCAAAGGAAAGAATCTCCTGGGGCCTGATGGGATTGTGTGGTACTCCTGGAAGGACTCGGATTACTATTCCTTGAAGAAGGTGAGCATGATGATCCGCCCACGGACTTACAGGCCCCGCCTCTCTCCATAACACCGCCTGTGTAAAACAATACTGCAGTGACATCATCGGGTCATTGTTGATTCTCCGTGGAAACTGTGGTTAAAGGGAAAGTAGTCACATGCGTCTCATAATCTTGGTCTTTGGCATACTGAATAAGTAAGTAAAAAACGtaagcaaatgataaaataacacGCACTGTTAAATTATCTTAGAAAtgatgtacaaaaacaaaaaaagctatttgatttggataaacattattaattagaaataattCAGAAcctaatataattttaatacatacTTGTTAATTGGTGTTTCTGTTACATTGACtagaaatattcttttttttttttttttagattgtgcTTCCAAAAACGTCATGTGACCGGTTTTATTATTGGGATaatcactcaaaaaaaaaaaaaatattccaaattcCAATTTTTCCAAATTTGAGattcttttttctgttaaatgttgaaaaaagagaaaagccagCTTTATGGTTACTAACATTCTTCTTTTGAACAGAAGAATCTCATAGAGGTTTGTAACAAGTGGAATCTGTTTAATGGcacatgtttcatttttgtgtgaactgtccctttaaaatgatccctttttttagtttttctttttttttttaaatgaaaaatcaattcttaacaattaaaaaaaatctaaataatgattaaaatcaatcttgactattaaaaatatatatatttttcataaaacaattgTTTATTAACTGTAAGGGTTTTCTTGATaagaatttatattttcttttttatatattatattttcttttcttcattgCAGCCAGCCTCTGTATTAAATAAGAACGTTTGACAAAGTTCTATTAATAGATATCCTGCCACTGATGTTTGTTTAAGCCTGAGTAATCCAGTGTAATTCAGAAGTAAATGGAAAATGTACAGCCTTGTAATGCCTAAATGtatgtttcacaatattgtttacattttgtaaatactttgagaatatataaaaaaggtcGTTTTTGAGAAATGCTGTTATATTATCTATAGCTGTCTGTTTGACTTTCCTTGTTCTACCTCTCTTCTTTAAGCTTCAGACTACTTTACAATGAGATAAACATATCTACAACATCCATGAAGACTCTTTCTGCCTATCACGCATTCACAGGAAGGGTGGAACAGACCAGCAAATGAATGAGGCACTGAAATAAAAGAGGTTTTGAGGGGCATTCGAtgattatttgcattatatagtCTTAGACGAGATATCAAATAGTAGACTCCTTAtagtcaaaaacagaaaacaagccgCCCCGGGAAGGAAACAGAATAGGGGGAGAAAGTGTTTCCGTGATTAAGAGGTCATCGAGCGCATTTCCTCATCTTCCTTTCTAAAGCCAGAGAttcgtttccttttttttaaagagagaaa

Function

NR:

description
PREDICTED: fibroleukin-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU178546 False 410 TUCP 0.52 2 13196907 13200027
XM_043262982.1 True 3397 mRNA 0.39 6 13193177 13200692

Neighbor

gene id symbol gene type direction distance location
prox1a prox1a,LOC107752784,LOC107592773,LOC107697775,LOC107594785,LOC107733138,LOC107674077 coding downstream 153751 13003579 ~ 13039426 (-)
smyd2a smyd2a,LOC107592771,LOC107752785,LOC107697773,LOC107733184,LOC107594786,LOC107674111 coding downstream 205285 12977069 ~ 12987892 (-)
cenpf cenpf,LOC107592772 coding downstream 216251 12962588 ~ 12976926 (-)
kcnk2a LOC107697693,LOC107752820,LOC107674044,LOC107733102,LOC107594834 coding downstream 240609 12933763 ~ 12952568 (-)
cgref1 LOC107697770 coding downstream 266111 12923396 ~ 12927066 (-)
efr3ba efr3ba,LOC107697777,LOC107592778,LOC107752767,LOC107733134 coding upstream 5310 13206002 ~ 13227737 (-)
LOC122361854 ect2l,LOC107592784,LOC107752807 coding upstream 69665 13270357 ~ 13278671 (-)
ccdc28a ccdc28a,LOC107752777,LOC107697785,LOC107592783,LOC107733152,LOC107594775 coding upstream 78084 13278776 ~ 13283695 (-)
tmem121aa tmem121a,tmem121,LOC107594772,LOC107674105,LOC107592808,LOC107697696 coding upstream 117719 13318411 ~ 13345591 (-)
tedc1 LOC107752774,LOC107697787,LOC107592785,LOC107733103,LOC107594770,LOC107674045 coding upstream 183848 13384540 ~ 13395619 (-)
G120833 NA non-coding downstream 9728 13180074 ~ 13183449 (-)
G120843 NA non-coding downstream 18986 13173948 ~ 13174191 (-)
G120767 NA non-coding downstream 41839 13151008 ~ 13151338 (-)
G120762 NA non-coding downstream 101807 13091080 ~ 13091370 (-)
G120756 NA non-coding downstream 111837 13077801 ~ 13081340 (-)
G120835 NA non-coding upstream 17035 13217727 ~ 13287287 (-)
G120865 LOC107752772,LOC107697781,LOC107733167,LOC107592781,LOC107674095,LOC107594780 non-coding upstream 67885 13268577 ~ 13269372 (-)
G120871 NA non-coding upstream 95578 13296270 ~ 13296536 (-)
G120929 NA non-coding upstream 577033 13777725 ~ 13815014 (-)
G120980 NA non-coding upstream 732728 13933420 ~ 13933685 (-)
G120660 LOC107752798,LOC107592762,LOC107697764,LOC107733171 other downstream 372509 12817192 ~ 12820668 (-)
LOC122361973 LOC107592804,LOC107697765,LOC107752799,LOC107674033,LOC107733077 other downstream 401308 12663239 ~ 12791869 (-)
lin52 lin52,LOC107594798 other downstream 801629 12381281 ~ 12391548 (-)
evla evla,LOC107719466,LOC107697733,LOC107563375,LOC107594809,LOC107733132,LOC108425620 other downstream 1248449 11915468 ~ 11944728 (-)
alkal2b fam150bb,fam150b,LOC107674025,LOC107733108,LOC108425626 other downstream 1388392 11800488 ~ 11804785 (-)
kidins220a id2a,id2,kidins220,LOC107579075,LOC107707685,LOC107553286,LOC107655320,LOC107752760 other upstream 780855 13981547 ~ 14040211 (-)
LOC122361652 LOC107679745,LOC107752800,LOC107594718 other upstream 1508799 14709491 ~ 14733577 (-)
myo6b myo6b,LOC107741840,LOC107594692,LOC107679792,LOC107600844,LOC107666253 other upstream 1591494 14792186 ~ 14839813 (-)
ptgr2 ptgr2 other upstream 1810134 15010826 ~ 15026415 (-)
crip1 crip1,LOC106611282,LOC107679815,LOC107594706,LOC107600860 other upstream 1859301 15059993 ~ 15064678 (-)

Expression


Co-expression Network