LOC122361708 (LOC107598628,LOC107708961,LOC107654010,LOC107719547,LOC107664629,LOC107557341)


Basic Information

Item Value
gene id LOC122361708
gene name LOC107598628,LOC107708961,LOC107654010,LOC107719547,LOC107664629,LOC107557341
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056715.1
NCBI id CM032084.1
chromosome length 22256391
location 15683661 ~ 15688440 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU179416
GTCAAAATGGCTCTCATGCACAGGGCCCTTCAAAACAGCCTCCGGGAGCCGCAGCTCAACCCTGCCTCGGTCTCACTGACACGGGACAGCCGGCAAACAGCATCCCCGACATCCACACGGTCACACAGCAGCTCTCAAAGTCACAGGTTGAAGACATTTTGCCGCCGGTTTTCTCTGTGACTCCTAAAGGCAGCGGAGCGGGATACGGCGTCGGCTTCGACCTCGATGACCTCCTCACTCAGTCTCTCACAGAACTCCAGCACTCCGACCTCAGGGAAAGTCACAATGACTTGGCCCCCCTGTCCGCATCCCTGCTCTCCGATTGGCTCGAGGTACACCGCATGACCCCTGCTGACATGGAGTCGCTCCAGCAGGAGCTCCAGCTGGGATCTCCCATGATCCTCTCTGACAACTCGACGCTTCCTGATACCTGACCGGTCCACTCACTTCGCCTCCATCCCCCCGTAGAACCGGTTGGGGGCCGCGAACAGAGGAACTTGATAGCTTTATTGTGCACCGGTGTGCGGTAGAGAGAATATGCTCGACGCTCCAAATTATTAAGGCCTTTACCTAGAATCCTACCCAGAAAAGTGCCTTTGTCTTTAATGGGTTcgtatgcattatttatttgtgccaacattaaaatatgatgcTCCGTTCGGTTTCGATTCCGAGAATTTCAGTGCCATTACCAAGCGATTCAGATCCGGGGGAGAACAAGTTTAGCTCAGAGGTGCTAGTGCCATTCGTTCACCCTGGAAACTACTTTCAGATGAGTTTAGAGAGTAATGGAGATTAGTTTAGCAGACCAGTGTTTAAAGCTATTTTC
>TU179418
AAAAAGAGAGGAGCAATTTCAGAAGACACAAAAGCAGCTCTCAAGGCTGCACTGCTTAAATCAGCACTAAGGCAGAAGGCTCGAGATGGAGGCTCTGCAGCTCTTGGTATCGAATTATTCAGAGGATCTGCTGGAGGATTATCCTCATCCCTCTGCTCCTCCAACTCTGGACCAGAGCAGAAGAAGCCAGTCACGGCCCAGGAGAGGCAACGAGAAAGGGAAGAGAAGCGTAGGAAGAGACAGGAGCGTGCGATGGAGCGAAAGAGGAAgctgaaggagaaagagaaaaaggagggaaaacaaGGCGAATCTTTGGGTGGCGTGTTACTCAGTGACAACGACAAGAAGCTGTTGGAGCGCTGGGGACGAATGATGGACAACCGGGGTGATAAATCGCAGACCTTTGAAACAAATATTGCCAAGAACAGTGAGGGTACAACTGCCCCGATCCAGCCAGCAAAAGGAAGCAATGTCATAAAGACACGCTCAGACGGGGGAGAATCAATGGCGCCAAAACAACCCAACGAAGTGCAGGCTTTCAAACCGCCACAAATACTGCCTCAAATGGGACCGTGTTTGGCAGCTGGGATATTCCATCCAACTCCGACTCATGATGCACAGCCCGTCTCTTTAGGCCCAGCTCAGAACGGAGACGTTGGGATAGTTGCTATAGGAGGAAGTGGAAGCGTTGGTGTGGTAACCGCCCCATGTGCCTTTCccaaaaacaacatattaaaaCCTCAGTTTCTGACCGTTGGAACGATGTTCACCGGTCTTGAGAACTGGACAGGAACAACTCCGCACCAGCCCCAGAAAACCCACCAGCCTCCACCGGAACTAAATAACCCCGCTCACACTGGCTTTGC
>XM_043262625.1
AATGCCAAGCGCACGCTGCAAGAGAGCTGAAGATTCTCAAGCACTTCAAACACGACAACATAATCGCCATTAAAGACATTCTCCAGCCTGTGGTCCCTCACTCGGCTTTCAAATCCGTGTACGTGGTTCTTGACCTCATGGAGAGCGACCTGCATCAGATTATCCACTCCCGCCAACCTCTGACCCCAGAACACACACGCTACTTCCTGTATCAGCTGCTAAGGGGCCTGAAATACATTCACTCGGCCAACGTCATTCACCGCGATCTCAAGCCGTCCAACCTGCTGGTGAACGAAAACTGCGAGCTGAAGATAGGCGACTTCGGCATGGCGCGCGGTTTAAGCGCGACCCACTCCGAAGAGTCGCGGTCGTTTATGACTGAATACGTAGCCACTCGTTGGTACCGCGCTCCTGAGCTCATGTTGTCTCTTCACCACTACAGCTTGGCCATCGACCTCTggtctgttggctgcatctttGGCGAGATGCTCGGCAGGAGGCAGATGTTTCCAGGGAAAAACTACGTACACCAGCTTCAGCTGATTCTTTCGGTTTTGGGAACGCCACCCGAGAGCATCGTCGGCTCGATAGGGTCGGACCGGGTGCGTTCTTACGTGCGGAGCCTGCCTTCAAAAGCAGCAGAGCCGCTTGCAGCGCTGTACCCGCAAGCTGAGCCCAGCGCATTGGACTTGTTGGGCGCAATGCTTCGATTTGACCCTCGCGGGCGCATCAGTGCATGTCAAGCCCTCGAACACCCTTACCTCGCCAAGTACCACGACGCAGACGACGAGCCAGTGTGCGTCCCTGCCTTTAATTTTGAGTTCGATCGGCAGCCAATGGGCAAAGAACAAATCAAAGAAGCTATACTGGCAGAAATCCAGGACTTCCATAAGAAGAAGCAGGGCGTCAGGAAGAAGATCCAGTTTAGGCCTCTCCATTCTAGTTCGGCGGGGGTCGGGGTGTCCGGCGGCACACCTCTGCTGCCTCGGAGCTTGACAGAAGCAGCACAGACTCGCACGAATCTCAATTTTAAACCAACAGACACTACGCAAACGAATGCAAACTCGTTTCAAGCTCCACATCACCTTACTCAGATTCTGCCACATTTGGCTCATGTAAGCTGCCAGGACGTGGACATGCCCAGCGCGAACTCCGACGGCCAGCCTGAGACCATCGATCTGACCACTCCCACAGACAAGGACGCGTCGTTTACCGAACCGGTGGCGAACTGCGGAAAGGAGGAGCTTGCCTCGTCCAATCAAATGCTTCAGTCCCACACAGTCTCTCAGACCCCGCCAACTTCAGTCTTCTCAGGCGATCCTTCGCTCTCTCTCACGCAGTCACAGGCTCAGTCCCTCTCTCAAAATCTCACTGCGTTCCTTGGGAAAGGAGGGAAAGTGACGACCGGGAAGTACAAAAAGAGAGGAGCAATTTCAGAAGACACAAAAGCAGCTCTCAAGGCTGCACTGCTTAAATCAGCACTAAGGCAGAAGGCTCGAGATGGAGGCTCTGCAGCTCTTGGTATCGAATTATTCAGAGGATCTGCTGGAGGATTATCCTCATCCCTCTGCTCCTCCAACTCTGGACCAGAGCAGAAGAAGCCAGTCACGGCCCAGGAGAGGCAACGAGAAAGGGAAGAGAAGCGTAGGAAGAGACAGGAGCGTGCGATGGAGCGAAAGAGGAAgctgaaggagaaagagaaaaaggagggaaaacaaGGCGAATCTTTGGGTGGCGTGTTACTCAGTGACAACGACAAGAAGCTGTTGGAGCGCTGGGGACGAATGATGGACAACCGGGGTGATAAATCGCAGACCTTTGAAACAAATATTGCCAAGAACAGTGAGGGTACAACTGCCCCGATCCAGCCAGCAAAAGGAAGCAATGTCATAAAGACACGCTCAGACGGGGGAGAATCAATGGCGCCAAAACAACCCAACGAAGTGCAGGCTTTCAAACCGCCACAAATACTGCCTCAAATGGGACCGTGTTTGGCAGCTGGGATATTCCATCCAACTCCGACTCATGATGCACAGCCCGTCTCTTTAGGCCCAGCTCAGAACGGAGACGTTGGGATAGTTGCTATAGGAGGAAGTGGAAGCGTTGGTGTGGTAACCGCCCCATGTGCCTTTCccaaaaacaacatattaaaaCCTCAGTTTCTGACCGTTGGAACGATGTTCACCGGTCTTGAGAACTGGACAGGAACAACTCCGCACCAGCCCCAGAAAACCCACCAGCCTCCACCGGAACTAAATAACCCCGCTCACACTGGCTTTGCGCACATGCAGACGCATCGAAGCCCGTCCCGCATGCGCAGTCACAGTCCAACGCTCATCCAGCTGCTGGACTCCTTTATGACCAAACCGTCAGGTCTGAACCCCAGCATCGGCATCTCGGACACCAGCAATGGTTCTCAAGCCACGGACAAACTTTGCGCTTTAGAGGAGCGTCAAAATGGCTCTCATGCACAGGGCCCTTCAAAACAGCCTCCGGGAGCCGCAGCTCAACCCTGCCTCGGTCTCACTGACACGGGACAGCCGGCAAACAGCATCCCCGACATCCACACGGTCACACAGCAGCTCTCAAAGTCACAGGTTGAAGACATTTTGCCGCCGGTTTTCTCTGTGACTCCTAAAGGCAGCGGAGCGGGATACGGCGTCGGCTTCGACCTCGATGACCTCCTCACTCAGTCTCTCACAGAACTCCAGCACTCCGACCTCAGGGAAAGTCACAATGACTTGGCCCCCCTGTCCGCATCCCTGCTCTCCGATTGGCTCGAGGTACACCGCATGACCCCTGCTGACATGGAGTCGCTCCAGCAGGAGCTCCAGCTGGGATCTCCCATGATCCTCTCTGACAACTCGACGCTTCCTGATACCTGACCGGTCCACTCACTTCGCCTCCATCCCCCCGTAGAACCGGTTGGGGGCCGCGAACAGAGGAACTTGATAGCTTTATTGTGCACCGGTGTGCGGTAGAGAGAATATGCTCGACGCTCCAAATTATTAAGGCCTTTACCTAGAATCCTACCCAGAAAAGTGCCTTTGTCTTTAATGGGTTcgtatgcattatttatttgtgccaacattaaaatatgatgcTCCGTTCGGTTTCGATTCCGAGAATTTCAGTGCCATTACCAAGCGATTCAGATCCGGGGGAGAACAAGTTTAGCTCAGAGGTGCTAGTGCCATTCGTTCACCCTGGAAACTACTTTCAGATGAGTTTAGAGAGTAATGGAGATTAGTTTAGCAGACCAGTGTTTAAAGCTATTTT

Function

NR:

description
PREDICTED: mitogen-activated protein kinase 7-like

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004707 MAP kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU179416 False 829 lncRNA 0.52 3 15683661 15685366
TU179418 False 866 TUCP 0.51 2 15685539 15686948
XM_043262625.1 True 3279 mRNA 0.53 8 15683662 15688440

Neighbor

gene id symbol gene type direction distance location
rps6ka5 rps6ka5,LOC107582903,LOC107730213,LOC107741860,LOC107679795,LOC107600856,LOC107666260 coding downstream 177730 15483111 ~ 15505931 (-)
zfp36l1a zfp36l1a,LOC107752727,LOC107577075,LOC107679798,LOC107666263,LOC107600858,LOC107741857 coding downstream 465491 15212872 ~ 15218170 (-)
kif3cb kif3cb,LOC107594701,LOC107679774,LOC107752740,LOC107741850,LOC107600866,LOC107666256 coding downstream 689146 14989660 ~ 14994515 (-)
asxl2 asxl2,LOC107679772,LOC107666255 coding downstream 695727 14970900 ~ 14987934 (-)
dtnbb LOC107600868,LOC107741848,LOC108425647 coding downstream 714434 14927166 ~ 14969227 (-)
LOC122361840 c17h14orf159,LOC107730207,LOC107679776 coding upstream 161025 15849465 ~ 15858684 (-)
slc24a4a slc24a4a,LOC107679778,LOC107730209,LOC107662654,LOC107602265,LOC107582941 coding upstream 170284 15858724 ~ 15890289 (-)
LOC122362058 crim1,LOC107679775,LOC107662656,LOC107582940 coding upstream 264142 15952582 ~ 16000711 (-)
LOC122362009 crim1,LOC107679775,LOC107662656,LOC106611167 coding upstream 429682 16118122 ~ 16207614 (-)
gpr132a LOC107679764,LOC107752700,LOC107569010,LOC107732878,LOC107662643 coding upstream 749790 16438230 ~ 16440346 (-)
G121427 NA non-coding downstream 5452 15601266 ~ 15678209 (-)
G121343 cdan1 non-coding downstream 165579 15516936 ~ 15518082 (-)
G121326 NA non-coding downstream 268508 15414869 ~ 15415153 (-)
G121324 NA non-coding downstream 270958 15412465 ~ 15412703 (-)
G121323 NA non-coding downstream 272401 15411042 ~ 15411260 (-)
G121450 NA non-coding upstream 24970 15713410 ~ 15720323 (-)
G121507 NA non-coding upstream 597682 16286122 ~ 16286403 (-)
G121509 NA non-coding upstream 645603 16334043 ~ 16334439 (-)
G121639 NA non-coding upstream 794207 16482647 ~ 16483969 (-)
G121644 NA non-coding upstream 860815 16549255 ~ 16550184 (-)
pax9 pax9,LOC107679748,LOC107666242,LOC107741874 other downstream 277158 15397788 ~ 15406503 (-)
crip2 crip2,LOC107594708,LOC107752734,LOC107679813,LOC107666262,LOC107741856,LOC107600859 other downstream 583704 15083818 ~ 15099957 (-)
crip1 crip1,LOC106611282,LOC107679815,LOC107594706,LOC107600860 other downstream 618983 15059993 ~ 15064678 (-)
ptgr2 ptgr2 other downstream 657246 15010826 ~ 15026415 (-)
myo6b myo6b,LOC107741840,LOC107594692,LOC107679792,LOC107600844,LOC107666253 other downstream 843848 14792186 ~ 14839813 (-)
G121438 LOC107708961,LOC107664629,LOC107654010,LOC107719547 other upstream 451 15688891 ~ 15689794 (-)
G121456 LOC107660450 other upstream 49822 15738262 ~ 15740486 (-)
LOC122362003 LOC107664362,LOC107560152,LOC107752022,LOC107658150 other upstream 71903 15760343 ~ 15767015 (-)
LOC122362005 crim1,LOC107582940,LOC107679775,LOC107662656 other upstream 141044 15829484 ~ 15951438 (-)
acyp1 acyp1 other upstream 2273849 17962289 ~ 17963981 (-)

Expression


Co-expression Network