G121799


Basic Information

Item Value
gene id G121799
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056715.1
NCBI id CM032084.1
chromosome length 22256391
location 17353412 ~ 17602299 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU179930
gttgttgttttttttTAAGAAATGGGTGGTTTATTCAATGCGATCACATAAGAAACATTCAATCGGAAATGGAGAGGATGTAACACGTGACTGAATGTTTGGCGTTCAGTAATATTGCATTTCATCTGCAGTACAGCGAGTGCAAAGTTGTAATGCCCCGGATGTGCTCCGGTCCGCCCGTCTGCTCTCTGCAGCTTCATGCACATCCTTCTCTGTAGGAAGTGTGTGAAAACTGGGAAATCTGCTGATGTGGAGAAATTGCCTCTGCTGCCACCAGATGGAGGTGAAAGTGCAGCTATAACCCGTGAATCCTCCGGAGACATCCAGAGGTCTTTGGGACTTTCAGTGCTGTGATCCGCTTCAGACCTTCACAAAAGATTCACCCGCATTCATTGTTTCTGCTCgtcaaataaaaggaaaatgagTTTCCACTCCTGCAGGCAGATCTGAATCTCTGCCATGTTAAAAATTGTTCAAATGTATGAAACTCTCAGACCATGATCATATTAGCACTCTCCttgcatattcattattatataatattctatACTGTCAATACTTTATTGTATCCAGAAACCCTAGATGTGGGACTTGCACATTTCCATTTCCATCAGATACGTTGTATCACACATTTAGACTCAAAACCggcaaaaaatttaaatgaaacaaaacatgaaaatgtgctCAAGCTCAGGCCAGCCCCGATGAGGATGTgtaagagtccaaacagatgataaaaacatcacaatagtCCACAGCacttaacatctggagaagacagaagatcaaataGTCCATCAAGAAATGTTGAACTAAAATCTGAGTCCATTATCTataataacacttcctccagcgAAAATCTCCTGTTGTCTCACACATATTAGTTTATAGAGGTTTTATTTAGTCTTGTAAACACTTCTTGATctgagcagatttctctcctgattcagaccagaacacttcTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU179930 True 965 lncRNA 0.40 3 17353412 17602299

Neighbor

gene id symbol gene type direction distance location
cdin1 zgc:154061,LOC107665555,LOC107724250,LOC107678147,LOC107554791,LOC107568570 coding downstream 76869 17216049 ~ 17276543 (-)
spred1 LOC107724258,LOC107677686,LOC107749536,LOC107698617,LOC107573584 coding downstream 299114 17036069 ~ 17054298 (-)
fam98b LOC107698618,LOC107568575,LOC107749537 coding downstream 319010 17029621 ~ 17034402 (-)
atxn3 atxn3,LOC107687604 coding downstream 338932 17005300 ~ 17014480 (-)
serpina10b LOC107573596,LOC107575705,LOC107677687,LOC107573588 coding downstream 348754 17001561 ~ 17004658 (-)
esrrb esrrb,LOC107678144 coding upstream 35291 17637590 ~ 17690815 (-)
LOC122361798 ift43,LOC107723274 coding upstream 189914 17792213 ~ 17808157 (-)
ttll5 ttll5 coding upstream 231023 17833322 ~ 17911030 (-)
flvcr2a flvcr2,flvcr2a,LOC107702238,LOC107589770,LOC106591116 coding upstream 313903 17916202 ~ 17936224 (-)
jdp2a jdp2,jdp2a,LOC107701522,LOC107589793,LOC107702236 coding upstream 337442 17939741 ~ 17949238 (-)
G121734 NA non-coding downstream 138134 17215055 ~ 17215278 (-)
G121721 NA non-coding downstream 143152 17168223 ~ 17210260 (-)
G121717 meis2,LOC107724236 non-coding downstream 196183 17150512 ~ 17157229 (-)
G121711 meis2,meis2a,LOC107698619 non-coding downstream 204384 17136870 ~ 17149028 (-)
G121715 NA non-coding downstream 220686 17132518 ~ 17132726 (-)
G121854 NA non-coding upstream 17921 17620220 ~ 17620671 (-)
G121905 tgfb3,LOC107688075,LOC107723269 non-coding upstream 188643 17790942 ~ 17810401 (-)
G121965 NA non-coding upstream 402975 18005274 ~ 18005603 (-)
G121980 NA non-coding upstream 468563 18070862 ~ 18132726 (-)
G122002 fermt2,LOC107565223,LOC107589764 non-coding upstream 534040 18136339 ~ 18148376 (-)
LOC122362005 crim1,LOC107582940,LOC107679775,LOC107662656 other downstream 1401974 15829484 ~ 15951438 (-)
LOC122362003 LOC107664362,LOC107560152,LOC107752022,LOC107658150 other downstream 1586397 15760343 ~ 15767015 (-)
G121456 LOC107660450 other downstream 1612926 15738262 ~ 15740486 (-)
G121438 LOC107708961,LOC107664629,LOC107654010,LOC107719547 other downstream 1663618 15688891 ~ 15689794 (-)
LOC122361708 LOC107598628,LOC107708961,LOC107654010,LOC107719547,LOC107664629,LOC107557341 other downstream 1664972 15683661 ~ 15688440 (-)
acyp1 acyp1 other upstream 359990 17962289 ~ 17963981 (-)
LOC122361562 otofb,LOC107752720,LOC107701524,LOC107723281,LOC108423539 other upstream 379752 17982051 ~ 18004214 (-)
LOC122361613 NA other upstream 677159 18279458 ~ 18281572 (-)
LOC122361943 NA other upstream 1028958 18631257 ~ 18644992 (-)
G122247 NA other upstream 1184583 18786882 ~ 18790880 (-)

Expression


Co-expression Network