G121987


Basic Information

Item Value
gene id G121987
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056715.1
NCBI id CM032084.1
chromosome length 22256391
location 18166757 ~ 18171026 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU180228
CAAGAAAATGGGTGATTCCAAACTCAGGCAAGGACTGCCAGGCCTGTATGAAGCGCATCTTGGCTTCGATGAGGCTCATCTGTGCCACGTTCTGATGGGCTTCCAGAATACGGGCAGAAATCTGAGAATGATGCATGGGTGAGCGTTAATACACAAGTGCTATAAGCCATCGTAATTTCAGCAGAAAGTCAGAGAGAACACACGCCGTCGTCAGAAAACAACCCCAGAGAAGAATGAAACACCAGACACGTCGATATGACACTGTTGCATTCAATCACCACAGAGATCACGGTGAACACACAAGATGCTCCTCTAAGCATCGCTTATGATCTGTTACACATGCGGcataacacacattcacaggaGGCACTGCTACCCCAGTCACCGTCATTTAGTCCCCGTTTCCCCAGAACACGAAACATTTTCACACCAGAAGGAAATGAGTGACGTCCCAGGAGTCTCCCGCAGATCAGTTACGTGCCTCGTGAAAGCTTTAATCAGAACTCCCTCAAAAGATCAATCTATGAAAGAGAAGCTTATATTTTTGACAAACTACGAGACAAATGTGGTGATAAAAGTGGAAACTACAGAGCCCCAAAGAGGACATGGTGACGGAAAAGTGTTCCTTCAGTGCTTCTGCATTATATTTCAAGGATTCTGCTTCCTCCTGAGAAAGTGTTGTTGACCAAAACTGTTGCATTTGCACAAGATGCATTACGTTCTCAATAAACTAGATCCTCTCACAAAACTATTGAATTGGTCTAGAAACTTGACACATAACTACAATATTCACCCAAGAAACAATACGTTGTTTAGCTAAATTTAGATTCTCTTGCataatttttctcttttaaaaactACTGCTTTCCTCCAAGAAACTTTACATTCTCtcacaaaacatttgcattcgAAAAAGAAACTCTACGATCTCTCACAGAACTACCGCACACCTAATTTTTCCACCATAAACGttctgcaaacaaacacaaagtttggtgaaaacaaactcaaaatttCTCAGGGGAACGCAACATTTTTGTGAGAGAACGCAAACCCATCTCCGCTTTTCTTTCATCACCACGTCTTTTTAGGGGCTCTGCGGAAAACTGCATTGtgcatctaaaataatataacaaaacaataactgtaaatgatgcaaatatatttcatgCACATAATTTGACTTAACAGCATTCAGGCAGATAGCTGTCCCGGAGGAGACACCAGTGACTCAAAACATGATCTGAAATGTTGAAATGTGAGCTTCGGGGTGAGCTACAGCTATAAATGGTCAAGTGGTTAATGGGAGGATCTCTGGAGTAAGACACAGCACCGGTGTTAGTGAGTCGTGGACGTTTAGCAGCTGTCAAACGAGCGACTTACCAGGTCCCTGACAAAGCCTGGCTGAGGAGGGTGGAAACGGGGAAGAGGAACGCGGAGAGGAAACAAGggaaaagcaaataaatgaatgaagcaGCAAACAGGCAGAATAACAGAATCAAAACAACCGTTAATgtacagagaaagaaaagggcAGGGTGTGCGAGTGAGTTTACAGCAGGGGAGGATCACGAGGAGAGATCGGAGGAACACGCTGCACACGCTCCATCCATACTGTGTCCATGTAGAAACCTGTGAGCTAGCAGAGATCGTGACATACCGTCGGTCTGAAACCAAGCACAACTAGTCACAGGGGAAGCTGCTTTTGCACTGATGTCAGGCTGACTCGTTTCAAATAAAAGTTATGATGACAACACGCGGATCTAGTAAGCTTATTATTCCTCTTAGGCCAAATTTCGAACCCGTCCTTGAGTTATCAAGCTATGACCACCAAACTTGGAACAGACCTTCTGGATGTTCTAGCTCTGTACTCTCGATCTTTTCCAACACATCTGACTTTGACCTCCAAAAAGTTCATATAATACTTTTCAATTACAATAAGAGTTATTGTTCGcttttgttgtaaaatattgtaatgctAACGTATTCTAAAGCATGCTAGgaacatgctagcaacatgctaacttATACATGCTAAACgtgcaaaaactaaaacatgctaaaaccacaaataataacaaaaatgtgctAAAACGTGTTCAAATACGTGCTAAAACATTTAAGCGATGGGGTGTGAAATACATATCGAATGAGATTGTATTAAAATCGttaaatgattcagttcaactcactttttcttgcttttaatttcacatttaagctttttattatttgaataaattacaaaatagcAGTATCCATTGCTTATGGTTCATTATATTAAAACGCATGCTTATGTAACTGCaggtatatataaaatttctaATGCATACTAACAAAATCTAACACCACAATAACAATGCAGGTCAACCACCATTAGTGGATTCAGAAGTAGTTTATATCTCTCTTTGACTGCCCTGTACTTCAAACCTCAAGCTTTTAAAAGCTTATAAACGTCAAACTAGCATCCGAACACCTATTTTTATATCTTCTGATTCTGATTTCATCTTCATcaacgacaacaacaaaaaaagtctttaatgcCATGTTTTGTGCTGACCAAATCAAAACCTTTTAAACACATAAACTGGGTTCAAAGTCCATGGCTGAGCTGTAGTTCACGATTAACCCGAAACGTTTCCGTCACACTTCAAGCTATACACCGTCGCCTCCACAAGGTGGAGCCACACACATTTACACCCAAGAAATCATCTGAAACCCCCCACCATTCGGATGACAACATCCGCTTTCCTGATCCTGTCGAGCCTGGAAGTGAGAAAGTCATCTATCCTTGTTTCCCCAAAGTTTAGTGCTTATTGACCCACGTCCTTCTGGGAATAAAATCCCAGAGAAAGCTTCTGAAGAAAAGAAATCGAGCGTATAATGCACGGATAAAAGAGCTCAGAATCATCCGGACTCCACCATCGCCCTCACAAACAAACCGCTCTCTTCTTCCCAGGATGCCTCTCCACATTCCCAGGCGCAGCTTGTTTCCTGTATTTTTTCCCGCCCGTTTCTGAAGACCCCACCCCAGCTCCTCAAAGTTTCTTCCAGAGAGAGTGAGATGTGAGGACAGGAAGCCCACCATCCCCCAGCATCACAGGAGCTGGACTGAGTCCAGGGCCACTGTATCGTGGAGACACCAGACACTCAGGGTTGATGTCGGTGCTGATGGGCTCTATGATCTGAGGGTCGGGATTCATGTGCTGCATCTTCAGGAAGGACAGAATGTTCTGGACCTCCAAGTTGTAGGAACTGTCTGCCATCGTCTTCCCTTTGGAGGCCAAGCGGCAAGCTGCCATCCACTGAGCGTACTGCTTCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU180228 True 3323 lncRNA 0.42 3 18166757 18171026

Neighbor

gene id symbol gene type direction distance location
fosaa fosaa,fos,LOC107723273,LOC107702235,LOC108423428,LOC107735358 coding downstream 208162 17952048 ~ 17958595 (-)
jdp2a jdp2,jdp2a,LOC107701522,LOC107589793,LOC107702236 coding downstream 217519 17939741 ~ 17949238 (-)
flvcr2a flvcr2,flvcr2a,LOC107702238,LOC107589770,LOC106591116 coding downstream 230533 17916202 ~ 17936224 (-)
ttll5 ttll5 coding downstream 255727 17833322 ~ 17911030 (-)
LOC122361798 ift43,LOC107723274 coding downstream 358600 17792213 ~ 17808157 (-)
LOC122361452 gjd2,LOC107752716,LOC107565221,LOC107687856 coding upstream 99845 18270871 ~ 18276126 (-)
aqr aqr coding upstream 111050 18282076 ~ 18311121 (-)
paplna papln,paplna coding upstream 142655 18313681 ~ 18341936 (-)
psen1 psen1,LOC107684238,LOC107753355,LOC107687832,LOC107723284 coding upstream 176399 18347425 ~ 18355107 (-)
trappc12 trappc12,LOC107684236,LOC107687835,LOC107753354,LOC107723257,LOC107589762 coding upstream 202964 18373990 ~ 18389654 (-)
G122002 fermt2,LOC107565223,LOC107589764 non-coding downstream 18381 18136339 ~ 18148376 (-)
G121980 NA non-coding downstream 34031 18070862 ~ 18132726 (-)
G121965 NA non-coding downstream 161154 18005274 ~ 18005603 (-)
G121905 tgfb3,LOC107688075,LOC107723269 non-coding downstream 356356 17790942 ~ 17810401 (-)
G121854 NA non-coding downstream 546086 17620220 ~ 17620671 (-)
G121986 NA non-coding upstream 2691 18173717 ~ 18212416 (-)
G122013 NA non-coding upstream 31028 18202054 ~ 18208382 (-)
G122015 NA non-coding upstream 34480 18205506 ~ 18208351 (-)
G122019 NA non-coding upstream 52096 18223122 ~ 18223414 (-)
G122079 NA non-coding upstream 187716 18358742 ~ 18359108 (-)
LOC122361562 otofb,LOC107752720,LOC107701524,LOC107723281,LOC108423539 other downstream 162543 17982051 ~ 18004214 (-)
acyp1 acyp1 other downstream 202776 17962289 ~ 17963981 (-)
LOC122362005 crim1,LOC107582940,LOC107679775,LOC107662656 other downstream 2215319 15829484 ~ 15951438 (-)
LOC122362003 LOC107664362,LOC107560152,LOC107752022,LOC107658150 other downstream 2399742 15760343 ~ 15767015 (-)
G121456 LOC107660450 other downstream 2426271 15738262 ~ 15740486 (-)
LOC122361613 NA other upstream 108432 18279458 ~ 18281572 (-)
LOC122361943 NA other upstream 460231 18631257 ~ 18644992 (-)
G122247 NA other upstream 615856 18786882 ~ 18790880 (-)
LOC122362226 vps39,LOC107707670,LOC107572021,LOC107687842,LOC107558491,LOC107687939,LOC107758712 other upstream 648637 18819663 ~ 18836620 (-)
ralgapa2 ralgapa2,LOC107687934 other upstream 976305 19147331 ~ 19282456 (-)

Expression


Co-expression Network