G122081


Basic Information

Item Value
gene id G122081
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056715.1
NCBI id CM032084.1
chromosome length 22256391
location 18369384 ~ 18369874 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU180365
tggacTCAACTTCTATTTCTGGAGTTAGCACATTAAGCATCATGTAAACATTAGTTTGCTACACAAGCATTCCTTTGCTAAATGGATTTGTCttaacttttctattttccaaaacaaatctctcaaggcaactgaaaaaaaactacagagaACGTAAcaataaaaggcaaaacaagTCTGTGGTTCACATCACGGGAAACAGATCAagctttaaatagtaaaaatatcgaaactctttggtggtttttgaacgcgatgctactggtctaatctgATTCattgatctatgctaagctatgctacaagtgctatcaccagacccagagatctgttgaatgttgaaaatgtagtgttcctttaacgctgattcagtggttcaactgATTCATTATAATGTTTGCTTCTACacgttttaatgtaaaaaaaaaaattgtaaagcacacaacaaatgtatatttaatatgtatatttgatttgattaaatgcactga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU180365 True 491 lncRNA 0.33 1 18369384 18369874

Neighbor

gene id symbol gene type direction distance location
psen1 psen1,LOC107684238,LOC107753355,LOC107687832,LOC107723284 coding downstream 14277 18347425 ~ 18355107 (-)
paplna papln,paplna coding downstream 27448 18313681 ~ 18341936 (-)
aqr aqr coding downstream 58263 18282076 ~ 18311121 (-)
LOC122361452 gjd2,LOC107752716,LOC107565221,LOC107687856 coding downstream 93258 18270871 ~ 18276126 (-)
fosaa fosaa,fos,LOC107723273,LOC107702235,LOC108423428,LOC107735358 coding downstream 410789 17952048 ~ 17958595 (-)
trappc12 trappc12,LOC107684236,LOC107687835,LOC107753354,LOC107723257,LOC107589762 coding upstream 4116 18373990 ~ 18389654 (-)
ccr6b LOC107558470,LOC107753366,LOC107687955,LOC107758715,LOC107687848,LOC107589789 coding upstream 229351 18599225 ~ 18602734 (-)
atp6v1c2 LOC107687954,LOC107753364,LOC107558472,LOC107687850,LOC107589777,LOC107758708 coding upstream 235267 18605141 ~ 18616059 (-)
exd2 LOC107687943,LOC107753346,LOC107758720,LOC107687840 coding upstream 304252 18674126 ~ 18684463 (-)
numb numb,LOC107687942,LOC107753345 coding upstream 316153 18686027 ~ 18726828 (-)
G122079 NA non-coding downstream 10276 18358742 ~ 18359108 (-)
G122019 NA non-coding downstream 145970 18223122 ~ 18223414 (-)
G121986 NA non-coding downstream 156968 18173717 ~ 18212416 (-)
G122013 NA non-coding downstream 161002 18202054 ~ 18208382 (-)
G122015 NA non-coding downstream 161033 18205506 ~ 18208351 (-)
G122104 NA non-coding upstream 51740 18421614 ~ 18425369 (-)
G122114 NA non-coding upstream 56439 18426313 ~ 18426728 (-)
G122115 NA non-coding upstream 58081 18427955 ~ 18428405 (-)
G122117 NA non-coding upstream 60140 18430014 ~ 18430246 (-)
G122118 NA non-coding upstream 60747 18430621 ~ 18430876 (-)
LOC122361613 NA other downstream 87812 18279458 ~ 18281572 (-)
LOC122361562 otofb,LOC107752720,LOC107701524,LOC107723281,LOC108423539 other downstream 365170 17982051 ~ 18004214 (-)
acyp1 acyp1 other downstream 405403 17962289 ~ 17963981 (-)
LOC122362005 crim1,LOC107582940,LOC107679775,LOC107662656 other downstream 2417946 15829484 ~ 15951438 (-)
LOC122362003 LOC107664362,LOC107560152,LOC107752022,LOC107658150 other downstream 2602369 15760343 ~ 15767015 (-)
LOC122361943 NA other upstream 261383 18631257 ~ 18644992 (-)
G122247 NA other upstream 417008 18786882 ~ 18790880 (-)
LOC122362226 vps39,LOC107707670,LOC107572021,LOC107687842,LOC107558491,LOC107687939,LOC107758712 other upstream 449789 18819663 ~ 18836620 (-)
ralgapa2 ralgapa2,LOC107687934 other upstream 777457 19147331 ~ 19282456 (-)
LOC122362030 cldn20,tfb1m,LOC101886267,LOC107571061,LOC107675320,LOC107573130,LOC107728965,LOC108443299,LOC108269830,LOC107680107,LOC107728964,LOC107675319 other upstream 1454585 19824459 ~ 20053139 (-)

Expression


Co-expression Network