G122104


Basic Information

Item Value
gene id G122104
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056715.1
NCBI id CM032084.1
chromosome length 22256391
location 18421614 ~ 18425369 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU180397
acagaaacgttCCCAAGGCTATCCCAATAGCCTCTGATTACTGATTCCCAGCCAGTCCTTCCGCGTTCCTCCCGCCGTTCCCTCCGTGCGCACGCTCCTTTTATTTGCCGGGGTTTATTTCTGAATGCTAATCAGAGCTCTTGTGAAGGTAATCATCACCTGGGCTCCCCAAGGGCCGCTCTCCCGCACAagagacagaaataaattattaaatgaaatctaatttcatttaattcatttgcGAGCAGCTGAATCCAATTTTGGCTGGGCCCTCTGGGAACCGCACAACAGTGACCCCGTggttttaatattgaatgtATTCAATAGatttaacagtatttaaatACGACGGATACAAATACACACCGCCCGAAAACACACGAGAGAGCTCCGGTCAGACGGAGACGGCAATCAAATCATCAAACCGCAGAGATATAATACACAGATGAGCGACATTGAGCAGTGACCTGACGTTACTGTACTGCTTTAGGGCTCTTCAGCAACTTATTTGGAGAAATCGGCTGGTTtaaagttttaaacatttactatatttgtatttttcttataCATTCCTCAGTCTCAGATAACACTGATTTATCGTGTGAGGTCGTATGGATTATTGTCACGGTGGCTGTATGCGCTTTTTAGAGCATCAAAATTTGGGCAcccgtttattattatttatttatttgttaatcttCACTTATGTTCGTCTGAAAATACTCAAATGCTATGCATACTGGACTGGATGGACTCGCTTCTAGAAAAAACTTACTAGGTTTACTAGTTTACTACTAGTTTATACAccgtgaaacatttttaatggttttacatCATCTTGCAGGTGAAAACTATTAACTActgcatttaaaagcattaaatatgattatattttgccataatattacatataattatttgtagtgttgtgtgttgtttatgaccctttgaaaatgattaattactattgcattaaatatatattttaaaaattcatatttgacATAATATTAGGGCATTTATTCAGTTTAAGACAATGGCACTGTTGTagtgttgtgtgttgtgttgtttatgacccttaatatgaat
>TU180398
TAACACAAAACAACCCGAGAAGCTTTCTATCAGCTCCAGCCTTTGTTTCTCACAGCGCCACCCTGCCACTAAATCGCATCGCATCGTCTTCGTGTTGTTCTTCCTCGCTCTTCTGAATGCACTCAGACGCCGCTATGTAGGTCACTTCCTCCTCCTCGCAGGAAAAAGGAACTCCACGCAGCACACGTCCTTAttatagcacacacacacacacacagtggacaAAGCAGCTTCAGCCCGTAAAGCAGGCTTGCTAATTCTCAAATCACGGACCCGGTGGCTTAGATAGAGGTAATAACAAACTAgcgagagagaggaggagaggagagacgGATATTTTCTCCTCCAGAGGAAGGAGGGGGCTGCGAGCACCGCTGGGAAACGGTCTAGCGCCGCGCTCCCTGAAATAACTCCGCTGTGAGAGCGTGGGAGGAACATTCGTACGCCGCTCGGCGCTCGGGCTGGAGACGCGCTTGAATAATTACACCGTTCAATTACATTCGCATCGCCGAGATGCTTTCTGGTAACAACGACGGCGACGACGGCAAAACGCATCTGAATAATTACTGCgcataaaacagtaataatggcTTGAAATGCGGGCGAGAGCGAACGCGGAGCAAGGCTCGGAGCACGGGAGAGCGAAACGATCATTAAATGGATCCGCAGCCGACTTCAGCTTCTTGACCGAATAACTGCGTGTGCAATGATAAAAGCCAGAAGGCCAAAATGAATCAGCCGACCGATGTACAGTAACTTACTGTAATATACAGTAGTGATATTTCATAATATGTGTACGTAAATACCGGTAATAAACGTAATAGTGCTACTAAGTAGGTACAGCACGGCCATAAGGAAATGTGTTGCTTCTAAATCTAGATTATTTCCTCTAAATTCAAGATTTTACGTCTAATAAATAAAGGGTTTATATTAATAACCTATAACAGTGCCTCAACTATCAAACCTAAACCAAATCCCCCAAATTCACTCAGATATACGTCACAAtacaaaagattattattttttgctactTCTGTTTCATTGCGACTTTGAAGCATTCGTGTGGCcatttttgcatgaatttaGCACACGTATGAGAGCAAATTTTGcacatatttctatatttagtgTTCGTTCGCGGCCATACAGCTGTCACGCAGCTCCAGACGGATGACGCAAAGGCTCAGTGTTTTTaccgtttgttttattttggctcTAATTTATTCGCGACATACATCGAGATCTCTACGCGGTGTGAGCGAGGAGAAAGTTAGACCCTCGACCGCGGCGGACCGGAGGTTACGAGATGAGGAACCAGATCACCGTTAGGACAGAAACGGCTGCTCTTTGAAAGCGATCAATGGCTGTGAGCCAGGACTCTCCAGAAGAAGAGCTCCATCTCACTCAGTCCTCAGAGGCCGTATCGCTGGAGACAACGGACATGAGGAATGAACGCAATTACGCCATTCCACAACCAATTATATGTTCGGCGCGTTGGCCGAGGCCCATAAATATCACACTACGCACACTTTTTAGAAGTTCACGTATGGCAAAATGCGTGGCGCGTTATGTTTTTGCCCAAACCGAAGTGGATTTTTCATGATAATTGTCCAACTGGAAGATGTCGCTCACGAGTAAAGTAAATTAGTCTGCGTTGggcttttatttctctttttcacaaGCCCAAGTTCAACACAATTAAGGGCGGCTGATGTGCGTTAGGTTGGGAATTGCTTTATTTAACCCTTGGTTTTTTGGTCACGCTTGCTTCACATAACCACTGTTACACGTCGTCCCATTGTGATGAAGCCAAACGTTCCAAACGTTCATCGTTTCATCATCctcatgaaataaacattctgtGGAATCTTCATGCAACAAAAACCCTgcctttttattgttatcaCGTTTCAATTGTGTTCTGCTGTGTCGGTTAGCTGtacatttttagtgttttttcccCACGATCAAAATAACTCGACTTGgatttgattgagattaattggaacgTTTcatatgcacttttaaaatgaatttcatGTTGTAGTTTGTGTATGCATTTTACTCATCTTAAATCTTGCATGCTATTGgtcttattttgaaataaaatttttatgcaaaaaaaatcattctctTTCACCCAACAACTAATGCACAATAGAACcggggttattatagttaacaaaACCGAACTTAAAACCATTAAATGACGCGTTgcagaactgttttcaacattaataataataataataatacaaaatgtttctcaagcagcaaatcagtatattaaaatgatttctgctcacgtgacactgaagactggagtaatggtgctgaaaattcagctttgaacacaggaataaattacatttactattCATGCGCATAAAAAatcagctattttaaatagtaataatttttattgattttttgatcacataaatgcagcctgaATGACTCCCTGCGACCTTTATCAGGAAAATGACATAATGTCCATAATTTCCGGGTAGAGCCGTTATCCGAACGCAGCAGGACACTAGTCGGCTGGTGCAAGGGATCCAAAAATATGACgcttttgaaatgcaaataatcTGAAAAAGAGACATAAGCTGAGAGAGGCAGCCGTGCAGAGAGCCATATGAAAGAATCTTtctcaaacagaaaaaaacagaaacgttCCCAAGGCTATCCCAATAGCCTCTGATTACTGATTCCCAGCCAGTCCTTCCGCGTTCCTCCCGCCGTTCCCTCCGTGCGCACGCTCCTTTTATTTGCCGGGGTTTATTTCTGAATGCTAATCAGAGCTCTTGTGAAGGTAATCATCACCTGGGCTCCCCAAGGGCCGCTCTCCCGCACAagagacagaaataaattattaaatgaaatctaatttcatttaattcatttgcGAGCAGCTGAATCCAATTTTGGCTGGGCCCTCTGGGAACCGCACAACAGTGACCCCGTggttttaatattgaatgtATTCAATAGatttaacagtatttaaatACGACGGATACAAATACACACCGCCCGAAAACACACGAGAGAGCTCCGGTCAGACGGAGACGGCAATCAAATCATCAAACCGCAGAGATATAATACACAGATGAGCGACATTGAGCAGTGACCTGACGTTACTGTACTGCTTTAGGGCTCTTCAGCAACTTATTTGGAGAAATCGGCTGGTTtaaagttttaaacatttactatatttgtatttttcttataCATTCCTCAGTCTCAGATAACACTGATTTATCGTGTGAGGTCGTATGGATTATTGTCACGGTGGCTGTATGCGCTTTTTAGAGCATCAAAATTTGGGCAcccgtttattattatttatttatttgttaatcttCACTTATGTTCGTCTGAAAATACTCAAATGCTATGCATACTGGACTGGATGGACTCGCTTCTAGAAAAAACTTACTAGGTTTACTAGTTTACTACTAGTTTATACAccgtgaaacatttttaatggtttta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU180397 False 1089 lncRNA 0.37 1 18421614 18422702
TU180398 True 3498 lncRNA 0.42 1 18421872 18425369

Neighbor

gene id symbol gene type direction distance location
trappc12 trappc12,LOC107684236,LOC107687835,LOC107753354,LOC107723257,LOC107589762 coding downstream 31960 18373990 ~ 18389654 (-)
psen1 psen1,LOC107684238,LOC107753355,LOC107687832,LOC107723284 coding downstream 66507 18347425 ~ 18355107 (-)
paplna papln,paplna coding downstream 79678 18313681 ~ 18341936 (-)
aqr aqr coding downstream 110493 18282076 ~ 18311121 (-)
LOC122361452 gjd2,LOC107752716,LOC107565221,LOC107687856 coding downstream 145488 18270871 ~ 18276126 (-)
ccr6b LOC107558470,LOC107753366,LOC107687955,LOC107758715,LOC107687848,LOC107589789 coding upstream 173856 18599225 ~ 18602734 (-)
atp6v1c2 LOC107687954,LOC107753364,LOC107558472,LOC107687850,LOC107589777,LOC107758708 coding upstream 179772 18605141 ~ 18616059 (-)
exd2 LOC107687943,LOC107753346,LOC107758720,LOC107687840 coding upstream 248757 18674126 ~ 18684463 (-)
numb numb,LOC107687942,LOC107753345 coding upstream 260658 18686027 ~ 18726828 (-)
LOC122362202 galnt16,LOC107707671,LOC107687852 coding upstream 369220 18794589 ~ 18815103 (-)
G122081 NA non-coding downstream 51740 18369384 ~ 18369874 (-)
G122079 NA non-coding downstream 62506 18358742 ~ 18359108 (-)
G122019 NA non-coding downstream 198200 18223122 ~ 18223414 (-)
G121986 NA non-coding downstream 209198 18173717 ~ 18212416 (-)
G122114 NA non-coding upstream 944 18426313 ~ 18426728 (-)
G122115 NA non-coding upstream 2586 18427955 ~ 18428405 (-)
G122117 NA non-coding upstream 4645 18430014 ~ 18430246 (-)
G122118 NA non-coding upstream 5252 18430621 ~ 18430876 (-)
G122119 NA non-coding upstream 5562 18430931 ~ 18431139 (-)
LOC122361613 NA other downstream 140042 18279458 ~ 18281572 (-)
LOC122361562 otofb,LOC107752720,LOC107701524,LOC107723281,LOC108423539 other downstream 417400 17982051 ~ 18004214 (-)
acyp1 acyp1 other downstream 457633 17962289 ~ 17963981 (-)
LOC122362005 crim1,LOC107582940,LOC107679775,LOC107662656 other downstream 2470176 15829484 ~ 15951438 (-)
LOC122362003 LOC107664362,LOC107560152,LOC107752022,LOC107658150 other downstream 2654599 15760343 ~ 15767015 (-)
LOC122361943 NA other upstream 205888 18631257 ~ 18644992 (-)
G122247 NA other upstream 361513 18786882 ~ 18790880 (-)
LOC122362226 vps39,LOC107707670,LOC107572021,LOC107687842,LOC107558491,LOC107687939,LOC107758712 other upstream 394294 18819663 ~ 18836620 (-)
ralgapa2 ralgapa2,LOC107687934 other upstream 721962 19147331 ~ 19282456 (-)
LOC122362030 cldn20,tfb1m,LOC101886267,LOC107571061,LOC107675320,LOC107573130,LOC107728965,LOC108443299,LOC108269830,LOC107680107,LOC107728964,LOC107675319 other upstream 1399090 19824459 ~ 20053139 (-)

Expression


Co-expression Network