G122122


Basic Information

Item Value
gene id G122122
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056715.1
NCBI id CM032084.1
chromosome length 22256391
location 18433178 ~ 18433529 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU180419
CGTTCTGCGTAGAGACCGGGCTTCaagcacaaatatataaacaaacacaaattattcTTGATATCTGATTTGATATATCATCAGCAAACATTATATGTAATTACTGCATGATAAGATAAGCCCGTAATCACGTTCAACTAAAGACACCTGCATCTTAATCAGAGAAGAAACATTTAGCAGAAAATCTCATTGTCTGCCTCTATGGTGTGAAATTGATTCTGCTATTTTTATTTCCCTTTATAATTGCAGAACGAATGCAGCACGTGCAGAAAGAAGCACTCGTGTCTTTAAACTACGATCTGCGATAAGGATAACTGAAGGCGTTTTGAGATCTGGGACCTTTGCGTTTTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU180419 True 352 lncRNA 0.37 1 18433178 18433529

Neighbor

gene id symbol gene type direction distance location
trappc12 trappc12,LOC107684236,LOC107687835,LOC107753354,LOC107723257,LOC107589762 coding downstream 43524 18373990 ~ 18389654 (-)
psen1 psen1,LOC107684238,LOC107753355,LOC107687832,LOC107723284 coding downstream 78071 18347425 ~ 18355107 (-)
paplna papln,paplna coding downstream 91242 18313681 ~ 18341936 (-)
aqr aqr coding downstream 122057 18282076 ~ 18311121 (-)
LOC122361452 gjd2,LOC107752716,LOC107565221,LOC107687856 coding downstream 157052 18270871 ~ 18276126 (-)
ccr6b LOC107558470,LOC107753366,LOC107687955,LOC107758715,LOC107687848,LOC107589789 coding upstream 165696 18599225 ~ 18602734 (-)
atp6v1c2 LOC107687954,LOC107753364,LOC107558472,LOC107687850,LOC107589777,LOC107758708 coding upstream 171612 18605141 ~ 18616059 (-)
exd2 LOC107687943,LOC107753346,LOC107758720,LOC107687840 coding upstream 240597 18674126 ~ 18684463 (-)
numb numb,LOC107687942,LOC107753345 coding upstream 252498 18686027 ~ 18726828 (-)
LOC122362202 galnt16,LOC107707671,LOC107687852 coding upstream 361060 18794589 ~ 18815103 (-)
G122121 NA non-coding downstream 344 18432598 ~ 18432834 (-)
G122120 NA non-coding downstream 1434 18431446 ~ 18431744 (-)
G122119 NA non-coding downstream 2039 18430931 ~ 18431139 (-)
G122118 NA non-coding downstream 2302 18430621 ~ 18430876 (-)
G122117 NA non-coding downstream 2932 18430014 ~ 18430246 (-)
G122126 NA non-coding upstream 11957 18445486 ~ 18445761 (-)
G122140 NA non-coding upstream 95357 18528886 ~ 18533976 (-)
LOC122362381 NA non-coding upstream 107686 18541215 ~ 18542247 (-)
LOC122361944 NA non-coding upstream 203521 18637050 ~ 18644573 (-)
LOC122361655 odc1,LOC107687839,LOC107687948,LOC107753348,LOC107758719,LOC107558486,LOC107687945,LOC107753347,LOC107758716,LOC107687860 non-coding upstream 216950 18650479 ~ 18667122 (-)
LOC122361613 NA other downstream 151606 18279458 ~ 18281572 (-)
LOC122361562 otofb,LOC107752720,LOC107701524,LOC107723281,LOC108423539 other downstream 428964 17982051 ~ 18004214 (-)
acyp1 acyp1 other downstream 469197 17962289 ~ 17963981 (-)
LOC122362005 crim1,LOC107582940,LOC107679775,LOC107662656 other downstream 2481740 15829484 ~ 15951438 (-)
LOC122362003 LOC107664362,LOC107560152,LOC107752022,LOC107658150 other downstream 2666163 15760343 ~ 15767015 (-)
LOC122361943 NA other upstream 197728 18631257 ~ 18644992 (-)
G122247 NA other upstream 353353 18786882 ~ 18790880 (-)
LOC122362226 vps39,LOC107707670,LOC107572021,LOC107687842,LOC107558491,LOC107687939,LOC107758712 other upstream 386134 18819663 ~ 18836620 (-)
ralgapa2 ralgapa2,LOC107687934 other upstream 713802 19147331 ~ 19282456 (-)
LOC122362030 cldn20,tfb1m,LOC101886267,LOC107571061,LOC107675320,LOC107573130,LOC107728965,LOC108443299,LOC108269830,LOC107680107,LOC107728964,LOC107675319 other upstream 1390930 19824459 ~ 20053139 (-)

Expression


Co-expression Network