G122240 (LOC107753347,LOC107687945,LOC107558486,LOC107687860,LOC107758716)


Basic Information

Item Value
gene id G122240
gene name LOC107753347,LOC107687945,LOC107558486,LOC107687860,LOC107758716
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056715.1
NCBI id CM032084.1
chromosome length 22256391
location 18669928 ~ 18673941 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU180592
GGGGGGGGGGTCTAAAAGTAGGGGTTAACATTAGTAGTGATTTATCTAGGGATTCTGACAATCTTGTACTGCAGCTTTAAGGCCTCCTTAGATTGTGGCATTAGAACAATCCGTTTGTCAAATATCGGTTTTGGATCAGTGTCAAATATGCTACATTTCACAGTTTAGTACATAagtttaaatcaaacaaaataatttgttacaaAATTCTTGTCACATTTAGGGCCAGTCACAGTATTAGCTTGGCGGCTAAGTGTTCTGTAAGAGTAGTGCATAGCATTTGTCAGGGAAGCAATGCATAAAAAGTTAACATGAACGTAACTTGagcaaaatatttgtaatgtgtaTCGAGTGACAAAACTAATGGGACTAGAAACGCTTATGATATGCCTCACCATACTACTCCGTTATAATAATGAAGTGATCATTGCTGGCATAACATGAGCATTGTAGTAGATTGTCAAGaaaaaacattagcataatTCTACAGCCTGTAATCCTATAGCTAACTATAGACTGGATGTCTTTAGTTATCGTTTTAGGTTCTGGTGAACAGATACAGAATTTTTAAGAGTTATACACGATCTGTATTCTAGCTGTATTAAGTGTGTATTGAGCATCAGGAGTGACTCATACTTCTCAAATAGCTGCATGATCtaatggaaatgcaaaagaatgCTGTAATTCGATTGAGGCACAACCATGTTTTATCAACCGTCTGTTACTTATTGCTTTTGCATTTATGCATCTTGTCTTAAACCACAACTGGAATGGTACAGTTCATTACAGAATAAGGCATACTTTACGTCTGCCAGATAATCAAAAGAGATTCCGATACATTTTCAGTGTCAGGATAACACATTTATGAAATCTCACTGGTGGTTTTGCTGGTGACTTTAGGATGACAAAGGGTATATTTTCTTTGGGGGTAAACAAGCGGGAGCTGACATTGTTCTCTGAACTGTCTGTGCATTTATACTGCAGATCCAGGTCTGCTTGACGTCAGTTTGGTTCGTTTGGCTGGTGTTTTCTTAACATGAGTTGTGACCTAGCAATTTGCCTTGGTACATTCTCACAATTGCTGTATAAGGCAGGTTAAGGCTGTTAGGCCAGTTTATGTCCACATGAACTGTACCCCAAGCTGCCGTTTTCAAATGTACTCTGGTTTGCTTCCTCAGGGGCCCCGGAGTTTGGTAAAGAGCTACTAAAAACCACCAAACAACGTCAAGCAAACCAAAGTCCCCATCAAAAGAGAAATAACCTTGTTTATAGACACATTCAATCAAAATGGCATATACATATAGCCAAACTGcacttgtttttaaagatgtcttAAACTGATAAAAGACTATAAATTAGTATAATGTATCTCCACAAAAACGTTTCAAACATTCAAGAAGCTTTCCAGATTCtatttacacaataaataattggGACTTTTCTTCCTcaggaaaatgaatgaataaaaatgggTCTCTGCTGGATGTGGATCGCAGGAAATAAAAGCCAAATATCCTGAATCTTCAGGCTTTTCCTTTCATCATCTAGCTCTTCCATCTTATAGTTGTCCTTCCAGTATACTGCTGACGGTCTGATCCAGTGCACAAGGCTGTTGGATGTTGGGTTTAACCCCTGCTACAGATCCCTGCAGCCTTTGCAGCTCCAGGATGCTGTCTAAAGCACTTTGCAGGTGTTCACTCAGTTCCCCATCTTCCACTAATGCCGTCAAACTGGGAGACTCTGCTGTCGAAGAAGCCAGCTTGTTCCTTTTAAGCATCGGAGTGCACTGCTCTGGAAGTGAGCCTTGCACCCTTGGGCCTACACAGTCTTGAGTGGCCACAGAATCAAACAGGTTCTGCGATTTACTACCTGTCCCAATTGCCTCCGTGTCAATGTGCAATTTCATCTTGTTTAGCTGATCTGGCCTCTGAGCATTTTTGTCCTCTGCAACACTTGACAAATGAGGCTTGAGAGATTCACCTTTCCCCTGCATGGTTCCTCCCTTTGTTAACTGCCCGCTGTAGTTTCGTTTAAACCCAGAGATCACATGTGAGGCATCACATGAGTTGTGGATAACTTTGCGGGATCCTGACTCTTGTTTGATAGTGAGGCGTATTGCTCCTTTGCTGCTAGAGCGATATGTCTTGAGACCAGGAGGTCTGTCAGATTGCAGAGTCCATGATGGTGGAGATGGAGGACAACTGACAAGGCCAGTCTGGACCGATGATACCTGGCTGTGCTGAGATGAGTTCTTCACCCGGGACATGAGGAAGGACTCTGCTGAACCAGCAAAATAATGAAACCTGTTAACATTTCACTGTTTCAGTGCATTAAATCTGGCTGTAATAGCAACAccttcacacttttttttttttttttttttttttttttttaagttttccgGGTTTTAAGTGCTGAACTCCCTGGTGCATCTACCGACCAAGAAAACGTGAAAATGGTGTGGATCTATTCTGGACAAGGGTTACAGGGAGTGGATCTGTAATCTGTGGggcattttgagctgaaacttcagacacattctggggacaccagaaacttatattgcatattgtaaaaaggggcataatatGTCTCCTTTAATTCTGACCTTGGAGGGTCACTGCcatgcagagtttagctctaaccctaatcaaagACACCTGAGCAAGCCAATCAAGAGGTTCCTTTTAGTATAAGGGTTTGAACTAAATTCTGCAGAACAGTGGTCCTCTGGGAACCCTGCTTTACTAGTGagaaacaaatgcacacaaaagaATTTTGTGCCTTGTTACCTGGATCTCTTCTGGCTTTGCGTCTGTCCTCGGCCAGTGAGACTCTCTCTGACTGGAGAAATAAACGCTCTAGCATCACCATCTCTGCTGATGGGCTCTCctgctgaagaaagaaataacaACTCAGACCTGCCATCTCAGGTAATGtaacatttagattttctgaaaaattacattggtcagtgatttaaataaattatgcctTTTATTACCTGGGATTCAGTGAGAAGTAGTTTCCTGTACTTGTTCAGCATGTCTTTGATTCGTTTAAACAGAACGACTGAAACGCACTCAAACTGCTTGTCCACTGCATAAAGAATGATATACTTTACAGGACAAgaagtttataaaatattgttaaattcaAACTTTATGATTGGAGtcaaacctgaaataaaatcagcctGGTTGGGAAGAGTTCTAGCACAAGTATGGTATGGCAACAAATGTCTCAAAGCATCCTCCACTGAAACAAATGGAGCCGAAGTGTTTGGGTTGAGAACAGCACTGTGGTCCAAAAACATCTGCTGTTTGAACCTGCAAACGCACAACgtatttctattttaagatgATTTTTGTGTACATTAAGTAGCAACTTTGTGGAACTTTGGTGGACAATATGGTGTCCATTCCAACAAACATTTAGGCCAGCTAGCCTTTCAAAGTGTTTTGACCCGATTTTCAATATTATTGGAGTATGTCAATTAACTCATCATTCAGTGGTCAGCTTCTCCATTGGACCCTGCTAAATTTGTTACAAAGGTAAGAGATTCTAGTCTATTGCCTTCTTAACCACTCTAACATTGATTTTGAGGACTCATATGCACACTATACCTTTGTCCCCTAAAAGTGTGGCCTAATCTTAAAGGGGTGAACAGATGCAAAATTTagtttgaactgaaatgtgCAGATAAGCTCTGCAAGACTGTGGTCTTCCTGGAGTTGAGTTTG

Function

NR:

description
PREDICTED: glioma tumor suppressor candidate region gene 1 protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU180592 True 3743 lncRNA 0.40 2 18669928 18673941

Neighbor

gene id symbol gene type direction distance location
atp6v1c2 LOC107687954,LOC107753364,LOC107558472,LOC107687850,LOC107589777,LOC107758708 coding downstream 53869 18605141 ~ 18616059 (-)
ccr6b LOC107558470,LOC107753366,LOC107687955,LOC107758715,LOC107687848,LOC107589789 coding downstream 67194 18599225 ~ 18602734 (-)
trappc12 trappc12,LOC107684236,LOC107687835,LOC107753354,LOC107723257,LOC107589762 coding downstream 280274 18373990 ~ 18389654 (-)
psen1 psen1,LOC107684238,LOC107753355,LOC107687832,LOC107723284 coding downstream 314821 18347425 ~ 18355107 (-)
paplna papln,paplna coding downstream 327992 18313681 ~ 18341936 (-)
exd2 LOC107687943,LOC107753346,LOC107758720,LOC107687840 coding upstream 185 18674126 ~ 18684463 (-)
numb numb,LOC107687942,LOC107753345 coding upstream 12086 18686027 ~ 18726828 (-)
LOC122362202 galnt16,LOC107707671,LOC107687852 coding upstream 120648 18794589 ~ 18815103 (-)
LOC122362021 NA coding upstream 163873 18837814 ~ 18839240 (-)
LOC122362022 NA coding upstream 187031 18860972 ~ 18864442 (-)
G122241 NA non-coding downstream 1917 18667372 ~ 18668011 (-)
LOC122361655 odc1,LOC107687839,LOC107687948,LOC107753348,LOC107758719,LOC107558486,LOC107687945,LOC107753347,LOC107758716,LOC107687860 non-coding downstream 2806 18650479 ~ 18667122 (-)
LOC122361944 NA non-coding downstream 25355 18637050 ~ 18644573 (-)
LOC122362381 NA non-coding downstream 127681 18541215 ~ 18542247 (-)
G122140 NA non-coding downstream 135952 18528886 ~ 18533976 (-)
G122245 NA non-coding upstream 22561 18696502 ~ 18698827 (-)
G122246 NA non-coding upstream 24903 18698844 ~ 18700255 (-)
LOC122361748 NA non-coding upstream 341656 19015597 ~ 19020095 (-)
G122270 NA non-coding upstream 347056 19020997 ~ 19022185 (-)
G122274 NA non-coding upstream 352839 19026780 ~ 19066968 (-)
LOC122361943 NA other downstream 24936 18631257 ~ 18644992 (-)
LOC122361613 NA other downstream 388356 18279458 ~ 18281572 (-)
LOC122361562 otofb,LOC107752720,LOC107701524,LOC107723281,LOC108423539 other downstream 665714 17982051 ~ 18004214 (-)
acyp1 acyp1 other downstream 705947 17962289 ~ 17963981 (-)
LOC122362005 crim1,LOC107582940,LOC107679775,LOC107662656 other downstream 2718490 15829484 ~ 15951438 (-)
G122247 NA other upstream 112941 18786882 ~ 18790880 (-)
LOC122362226 vps39,LOC107707670,LOC107572021,LOC107687842,LOC107558491,LOC107687939,LOC107758712 other upstream 145722 18819663 ~ 18836620 (-)
ralgapa2 ralgapa2,LOC107687934 other upstream 473390 19147331 ~ 19282456 (-)
LOC122362030 cldn20,tfb1m,LOC101886267,LOC107571061,LOC107675320,LOC107573130,LOC107728965,LOC108443299,LOC108269830,LOC107680107,LOC107728964,LOC107675319 other upstream 1150518 19824459 ~ 20053139 (-)
LOC122362234 kif26a,kif26ab,LOC107739214,LOC107662598,LOC107732702,LOC107559913,LOC107586892 other upstream 1882782 20556723 ~ 20636159 (-)

Expression


Co-expression Network