G122754


Basic Information

Item Value
gene id G122754
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056715.1
NCBI id CM032084.1
chromosome length 22256391
location 20855122 ~ 20857658 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU181315
CAGCTATATACTTTATTTGACAGGGGAATAACTAGCAAAAGCAAGCACAACAGCACATAACAAGTCATACTTTCAAATATTACAACAATTGAAAACGTTTGTCTGTACATAACGGACCAGTTATCATAAAAACCTGCAGTGAGTATGTTTGTCTACCAGCCGCTTACAGCACAGTAGCCTACACTGTGTGTCTTATTCTCATGGACTGAATCAGATCTGCCGCTTCTTACAGAATGAGATCCAACTTCCTGCAGCAGTTTTTGAGGGTTCTTACAGCACAGACATCGCAGTTTTCGTTGCCCCTGGCAACAATCTGCAGCAGGAATATGGCGTGTTCATGAAGGTCATCAAATATGTCGCCAAAGAGTCTTCAGGACTCACGTGCATAGTTGactgaacacaaatgaaaaacctttaaaacgctttccaataaaaatatgcacagcttatttgaattttaaaattaacttcatttttttttttttaacacaagtATATAGACCTTTTTCTTTCATCGTTCAGTCAAATAACTGATGAGTTAACCATTGAAACAGAATAGATCAATGAAAACATAACTACAGTGATTGGTGGATTATAGATGCATACATATCCAACAAATAACTATTGTTTATAGTTGAAAATACAATAGTTGACAGTCTAGCTGTGCTAATGGCACCAGAAACAATTGTGTTTTACACTGAAAATTTAGGGCGCATAGGCtacaacaatataaaacatatgttagcaaagatattttaacatgtcAGAGGTGTTTTTATCTCATCcattcaaatgtgttttctgtaaaattaagtTATTTGGTAACGTTCTCCAGAAACAAAGCTAGACCACTGAATATATTCAGTTGGAGAAGCTTGTCAGATATCAAGGCCTAAATGTAAAGAAGATAAAATATGTAGGATAACATGGGAAATTTAGGctgatttgcttgtttttacacacacacacacacacacacacacacacacacactgttttgcCATGTTTAATGGCaactctccataggcgtaattgtttttatactgtacagactgtatgtgttattgtcctacttctaattctgtatgttttataaccTTGTTTCCTAATGGGTACCTAAAACGTCCCACAAGGTTAAAATGTACTGGTATACCTATCCTTGGGGGTCCCCATAAATACCaagtacacgcacacacacacgcgcacacacacacacacacacacacacacacacacacacacacacacacacacacacaaccagtAACTCCCAACATCCGCACAGAGAAATGCGACCATATTAGGTTGCTGGTAATTTTTAAAGGGCAAGCTACATGATTTTTTATAAGAACCATGGGCACTATAGGCCACTGCCAGATAAGAAATCatttaacttttaacatttcagttttacacacatattaagagattttgctttttataaaaacaccTAGCTATGCAGCTATTGTTCACTTGGACGCACTTTCTTGAAACTCTTCATGATCCGGTGGATTGCGTTCCTGTACAGTTACTTTACGACCGCGCAAATAATACACGAGCACTAACAGAGCAAAAAGAGCCACTACTAGGAATACTATCAGCCCAGCATACTCTGCTGGGGTCGACAGTGCCCCTCTTGCTATATAATTCGATGACGGTGTTGGTAACAGTTTAGCATTATACAGACTAGAAGAAAGAGTGCATTCGGTTTCATTGACGAGGATGAAAGGCTCGTAGCAAGCGCATCCGTAAGACCCTATCGTGTTTTCGCACTTGTGCGCGCAGCCGTGATTCGATTCACATTCGTCGATATCTTCGCAGGTTTGCTCGCTTCTAACAAAACCGGCCGGGCACCAACACGCGGACCCGCCTCTCAAACACAGCGCCTGGCAAACCCTCTCCGAGCAGTAGAAATCGCAGCGGCGGGGATCTCGCGCGTTCGAACGGAAGCTTTCCTTGCACGAGCACCGGTATCCGTTTTTCACCGGAGCGCATTTATGCTCGCAGGGCGCGAACATACAGCGCGCGCTATCCAGAACGACCGCGCTTCCTTTGCAAAGTTCCCCCCGAGTTTCCTCGCACAGAAACCCGTTCAGTTTCTCCGCGCACGGTCTCGGCGTCCGCATCCCGTCGGCTGAGACGGACGCGCAGAGCGGGACGCACGACTTTCCTTCGGTCTCCAAGTTGGTGAAGTCTGAGCTCCGTGAGCCCgtattatttaaacacatttcgCTTGACACGGAGAGCCCGGTCCAAAAGTGTCCGATCAGGTTATTAAGGAGATAGTCCACAAGTTCATCAGATGCGTTAGCCTGGATGAGTAACCGACCGCCCCGTTCTCCGCAAACCCGTTCAGCCGTTTGGAAGTCCACCGGCATTTGGTAAACGTTTGCGCAGTGTTTTACGTTTTTTGTGCAGGCACAGCTGTATACCATTCCGGCGCACGACGAAATGATCACCGTGAAAAAAATCGTTCGTTTGTGAGAATCCATCCCAAAAGGCAGGCTACGGCAACTCGAGCGGCACGAGGATACGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU181315 True 2537 lncRNA 0.44 1 20855122 20857658

Neighbor

gene id symbol gene type direction distance location
LOC122361693 si:ch211-202f3.3,LOC107739218,LOC107664433,LOC107586857,LOC107559906,LOC107732416,LOC107662629 coding downstream 8290 20839626 ~ 20846832 (-)
LOC122361695 si:ch211-202f3.3,LOC107732416,LOC107559906,LOC107664433,LOC107662629,LOC107739218,LOC107586857 coding downstream 17577 20824978 ~ 20837545 (-)
si:ch211-202f3.4 si:ch211-202f3.4,LOC107732402,LOC107662605,LOC107559907,LOC107586858,LOC107739220 coding downstream 41176 20803157 ~ 20813946 (-)
vcpkmt vcpkmt,LOC107559878,LOC107687351 coding downstream 53149 20800053 ~ 20801973 (-)
LOC122361586 LOC107739219,LOC107679812,LOC107662604,LOC107732422,LOC107586859,LOC107679809,LOC107559908 coding downstream 56145 20788110 ~ 20798977 (-)
marc1 LOC107662611,LOC107732350,LOC107586856,LOC107559876 coding upstream 25436 20883094 ~ 20886023 (-)
kcnk3b kcnk3b,LOC107664451,LOC107739252,LOC107586855,LOC107662623,LOC107732341,LOC107559904 coding upstream 29478 20887136 ~ 20893002 (-)
ezra ezra,LOC107664503,LOC107739227,LOC107732333,LOC107559900,LOC107662612,LOC108435787 coding upstream 36874 20894532 ~ 20907461 (-)
tagapa LOC107739253,LOC107664439,LOC107586907,LOC107559899,LOC107732328,LOC107662630 coding upstream 51216 20908874 ~ 20913167 (-)
capn3a capn3a,LOC107586853,LOC107739229,LOC107732302,LOC108435782 coding upstream 81897 20939555 ~ 20954323 (-)
G122646 NA non-coding downstream 188452 20658480 ~ 20666670 (-)
G122628 NA non-coding downstream 214710 20595306 ~ 20640412 (-)
G122625 NA non-coding downstream 326211 20525065 ~ 20528911 (-)
G122594 NA non-coding downstream 687481 20167024 ~ 20167641 (-)
G122566 NA non-coding downstream 1035935 19818960 ~ 19819187 (-)
G122775 NA non-coding upstream 613 20858271 ~ 20861117 (-)
G122783 NA non-coding upstream 17114 20874772 ~ 20875152 (-)
G122786 NA non-coding upstream 22348 20880006 ~ 20880453 (-)
G122788 NA non-coding upstream 28530 20886188 ~ 20886913 (-)
G122790 NA non-coding upstream 125710 20983368 ~ 20984476 (-)
aspg aspg,LOC107586863,LOC107739215,LOC107732472,LOC107662599 other downstream 84893 20757716 ~ 20770229 (-)
LOC122362234 kif26a,kif26ab,LOC107739214,LOC107662598,LOC107732702,LOC107559913,LOC107586892 other downstream 218963 20556723 ~ 20636159 (-)
LOC122362030 cldn20,tfb1m,LOC101886267,LOC107571061,LOC107675320,LOC107573130,LOC107728965,LOC108443299,LOC108269830,LOC107680107,LOC107728964,LOC107675319 other downstream 801983 19824459 ~ 20053139 (-)
ralgapa2 ralgapa2,LOC107687934 other downstream 1572666 19147331 ~ 19282456 (-)
LOC122362226 vps39,LOC107707670,LOC107572021,LOC107687842,LOC107558491,LOC107687939,LOC107758712 other downstream 2018502 18819663 ~ 18836620 (-)
nenf nenf,LOC107739254,LOC107664444,LOC107732830,LOC107662615,LOC107586886 other upstream 57543 20915201 ~ 20916639 (-)
tmem63c tmem63c,LOC107732232 other upstream 220403 21078061 ~ 21116556 (-)
G123095 NA other upstream 883860 21741518 ~ 21742973 (-)
LOC122362121 gskip,LOC107731910,LOC107561679,LOC107664426 other upstream 886032 21743690 ~ 21748036 (-)
G123216 NA other upstream 1013061 21870719 ~ 21871201 (-)

Expression


Co-expression Network