G122788


Basic Information

Item Value
gene id G122788
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056715.1
NCBI id CM032084.1
chromosome length 22256391
location 20886188 ~ 20886913 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU181371
ttgtcaaaagtaaaaagctaaatgtataGGCTATTAACCAACTGTACCAAGGTCACATGACTGTGATTTTGTTATCAGTTTAGCCATATTTGCAGTAACGTTTATACAAATGGTAATTAGCGCGCCAAAAAAGTTACTATGCTTTAACTACAATAAAACCATGCATGCGtataaaataatgcaagatcttataaaataatgcaagaaaatatatttagcttgtttttcaTCACAGACCttgtttcatttaatcaaattgaTTGGCTTTGCTAAAATTGATTGATTGCtaaaatatgaacttgtatTAGCATTGTATTAGCATGCAACAAACTTGATTTGAACCTGGAACATTCAAAAAGCGTTTGCGACCCATTTAACCTGTAATGTAACGGGCTATTGTATGatggatttatattttttatctgtcctattcatttaaacagattcttcccaaaattaaaataccaTTCTGTCTTTACCATTCACCCTTAAGTTGATCAGTTGCGGGTACGGACGGCTACAATGCGAAGAGAGATCATTAAAAAGTCAATGGGGATCAGAAACTATTTTGTTACCCACATTTTTGTACGTGTGTTCAGCAGAATAAAGAGACGCATACAGGTTTGATGAcagtaaatgttgacagaacgttgtgtttattttttatctataGTAAAAAGTCCGAAtgacaggtgttttttttcgGAGAGGattgaaaaataaagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU181371 True 726 lncRNA 0.33 1 20886188 20886913

Neighbor

gene id symbol gene type direction distance location
marc1 LOC107662611,LOC107732350,LOC107586856,LOC107559876 coding downstream 165 20883094 ~ 20886023 (-)
LOC122361693 si:ch211-202f3.3,LOC107739218,LOC107664433,LOC107586857,LOC107559906,LOC107732416,LOC107662629 coding downstream 39356 20839626 ~ 20846832 (-)
LOC122361695 si:ch211-202f3.3,LOC107732416,LOC107559906,LOC107664433,LOC107662629,LOC107739218,LOC107586857 coding downstream 48643 20824978 ~ 20837545 (-)
si:ch211-202f3.4 si:ch211-202f3.4,LOC107732402,LOC107662605,LOC107559907,LOC107586858,LOC107739220 coding downstream 72242 20803157 ~ 20813946 (-)
vcpkmt vcpkmt,LOC107559878,LOC107687351 coding downstream 84215 20800053 ~ 20801973 (-)
kcnk3b kcnk3b,LOC107664451,LOC107739252,LOC107586855,LOC107662623,LOC107732341,LOC107559904 coding upstream 223 20887136 ~ 20893002 (-)
ezra ezra,LOC107664503,LOC107739227,LOC107732333,LOC107559900,LOC107662612,LOC108435787 coding upstream 7619 20894532 ~ 20907461 (-)
tagapa LOC107739253,LOC107664439,LOC107586907,LOC107559899,LOC107732328,LOC107662630 coding upstream 21961 20908874 ~ 20913167 (-)
capn3a capn3a,LOC107586853,LOC107739229,LOC107732302,LOC108435782 coding upstream 52642 20939555 ~ 20954323 (-)
ganc ganc,LOC107664459,LOC107739230,LOC107586882 coding upstream 67591 20954504 ~ 20965148 (-)
G122786 NA non-coding downstream 5735 20880006 ~ 20880453 (-)
G122783 NA non-coding downstream 11036 20874772 ~ 20875152 (-)
G122775 NA non-coding downstream 25071 20858271 ~ 20861117 (-)
G122754 NA non-coding downstream 28530 20855122 ~ 20857658 (-)
G122646 NA non-coding downstream 219518 20658480 ~ 20666670 (-)
G122790 NA non-coding upstream 96455 20983368 ~ 20984476 (-)
G122822 NA non-coding upstream 108425 20995338 ~ 20997188 (-)
G122827 aldh6a1,LOC103152679,LOC106922127,LOC107586880,LOC107664467,LOC107739234 non-coding upstream 123253 21010166 ~ 21011368 (-)
G122828 NA non-coding upstream 124531 21011444 ~ 21013259 (-)
G122837 NA non-coding upstream 144827 21031740 ~ 21031939 (-)
aspg aspg,LOC107586863,LOC107739215,LOC107732472,LOC107662599 other downstream 115959 20757716 ~ 20770229 (-)
LOC122362234 kif26a,kif26ab,LOC107739214,LOC107662598,LOC107732702,LOC107559913,LOC107586892 other downstream 250029 20556723 ~ 20636159 (-)
LOC122362030 cldn20,tfb1m,LOC101886267,LOC107571061,LOC107675320,LOC107573130,LOC107728965,LOC108443299,LOC108269830,LOC107680107,LOC107728964,LOC107675319 other downstream 833049 19824459 ~ 20053139 (-)
ralgapa2 ralgapa2,LOC107687934 other downstream 1603732 19147331 ~ 19282456 (-)
LOC122362226 vps39,LOC107707670,LOC107572021,LOC107687842,LOC107558491,LOC107687939,LOC107758712 other downstream 2049568 18819663 ~ 18836620 (-)
nenf nenf,LOC107739254,LOC107664444,LOC107732830,LOC107662615,LOC107586886 other upstream 28288 20915201 ~ 20916639 (-)
tmem63c tmem63c,LOC107732232 other upstream 191148 21078061 ~ 21116556 (-)
G123095 NA other upstream 854605 21741518 ~ 21742973 (-)
LOC122362121 gskip,LOC107731910,LOC107561679,LOC107664426 other upstream 856777 21743690 ~ 21748036 (-)
G123216 NA other upstream 983806 21870719 ~ 21871201 (-)

Expression


Co-expression Network