dpysl5a (dpysl5a,dpysl5,LOC107741845,LOC107666251,LOC107752745,LOC107679787,LOC107594693)


Basic Information

Item Value
gene id dpysl5a
gene name dpysl5a,dpysl5,LOC107741845,LOC107666251,LOC107752745,LOC107679787,LOC107594693
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056715.1
NCBI id CM032084.1
chromosome length 22256391
location 14861336 ~ 14876524 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043262152.1
GGCTCCCACAGTCTGGATGCTGCCGAGACCGTAAGGTTTACCGGGCTGGACCAACCGAAGCATCTGCCTGTGTCTGCCTGCCGTCTAACAGGCTTTATTGTTCACCGGTGCCGAAAGTGAAGGAAAAGCGCCTTTTGAGGATATAACAAAGGAAGTTGAACCATGTGTTCCAGCTCAGCAACGGTGCGTATTCTTATAAAAGGAGGTAAAGTGGTGAACGATGACTTCACGCAAGAAGCGGATGTGTACATCGAGAATGGCATTATCCAGCAAGTGGGCAAGGAGCTGATGATCCCGGGTGGGGCCAAGGTTATAGATGCCACAGGAAAGCTGGTGCTTCCGGGTGGCATAGACACCAGCGTCCACCTGAACGAGAGCTTCATGAACGCCAACACCGCGGATGACTTCTACAGCGGCACCAAGGCCGCTCTGGCTGGAGGCACCACTATGGTGATTGGTCATGTGCTGCCAGAGAAGAACGAATCATTGCTGGACGCTTATGAAACGTGCCGCTCTCACGCTGACGCCAAGGCCTGCTGTGATTACGCTCTTCATGTGGGAGTGACCTGGTGGGGACCAAAgGTTAGGGCTCAAATGGAGACACTGGTGCGGGACAAAGGGGTGAACTCCTTCCAGATGTTCATGGCATATAAGGACATGTTCATGCTGAGGGACAGCGAGCTGTTTCAGGCCCTGCAGAACTGTAAGGACATCGGTGCTGTGGCCCGCGTCCATGCGGAGAATGGAGAGCTGGTTGCGGAGGGTGCCAGAGAAGCGCTGGATCTGGGTATCAGCGGACCGGAGGGCATTGAGATAAGCAGACCCGAGGAGCTGGAAGCAGAGGCCGTCCACCGAGCTATTACCATCGCTAACAGAGCCCACTGTCCCATATATCTTGTGAATGTGTCCAGCATGTCGGCAGGGGATGTTTTAGCATCTGCTAAAATGCAGGGGAAAGTGGTGCATGGAGAGACGACCACTGCTCACGCCGTCTTAAACGGGATGCAGTACTACCACCAGGAATGGGTCCATGCAGCCGCTTTCGTCACTGTGCCACCACTCAGACTCGACCCCAACACACCCAATTACCTgctcagcctcctgggaaaTGACACTCTGAACGTTGTGACGTCGGACCACCGACCCTTCACCACGAAACAGAAGGCGATGGGCAAAGACGACTTCACTAAAATCCCTCACGGTGTTCCTGGGGTGCAGGACCGCATGAGTGTTATTTGGGAGCGGGCAGTGGTCGGAGGCAAGATGGATGAGAATCGTTTTGTGGCTGTCACAAGCTCCAATGCTGCAAAGATCTACAACCTTTACCCCAGGAAGGGCAGGATCATCCCTGGAGCCGATGCTGACGTAGTCGTCTGGGATCCAGAATCAACAAGGACCATCTCTGTGACCACTCAGTGGCAGGGTGGGGATGTAAATCTGTACGAGAACCTGCGCTGTCACGGCGTCCCGCTGGTAACCATCAGCCGCGGTCGCGTGGTCTATGAAAACGGCATCTTCACCTGCGCTGAGGGCTCAGGAAAGTTCTACCCTCTCCGAACCTTCCCAGACTACCTCTACAAGAAAATGGTGCAGAGGGAGAAGTGTCAAGCGCTCAAGGGGGTGGAGCGCGCGCCCTACACTGGAGATGTGGCCGCGGTGCAGAATTCAGGGAAGAAGGAAGTGGGCCCTGCAGATGGGGACATGAACCCACGACCCTGCACGCGCCACGGAGGGATGAGAGACCTACACGAGTCAAGCTTTAGTTTGTCTGGAGCCCAAATCGACGACAACGTTCCAAAGAGAGCTTCCGCGCGGATTCTGGCGCCACCTGGCGGTCGCTCGAGTGGAATCTGGTAACCTCTCAGATCAACACTTACTGAAGTCTGCAACCGAACACCTACATTTTTGACAACCTCACATctgataaaaatgatttaatttgtaATCACTCGCAACTAAATtcctgtgttttttctttttttatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatgtctgtatacaagggaaaaatatattggGAAAACAAGGTACACGTCGGAAAAAACATGTAAGATCCAAAATGTTACAGGGTGTTTAGTTCTTCATATTCAGTCAAATGAAATGGTGAAGGTCGTGTCCGATTGCAACACTGTTGTAGTGCTAAATAAATGACGGAAAACTTTTactaattgtttttgttaacagTACCTTTTCACGTAAGCTGCCATTGAAcctgttttaaaaagttgttttaaggATGGAACGTTATTAGTTCTCGTATTTGGTCATGGCTTGAAAATGTGAACCATTGtaaagttatttaatatttgaactgttttaatgtgttgGCGGATGACTATACGTTTACCTCAGTGTTTATCTCTGGAGCTACACTCGTGTACATTAGCGCTCTTACAGCGACCAGCTGACCAGACCTTGACGGCAGGTACAACTAATTCTAGGCGCTGGACACGCGCTTATTTTTACTATCTTATTCTCGAGACTCCAAATTTCGAGAGGATTGTTTCTCTGTTGGCGACACGGGCCGCATTCAGTTCATAAGAAGCGTTTTCGATTCTCTTAATGTCATTTatgagcacacacacgcacccgACCTTGTGAAATGTGAATAAAGTATAACATTGTTTGCAATGTTGCATATCAAGTTTAGCTGTGTAACGAACCTACaaaagacttttctttttcaatttttatcTGCTAAGTCTACATTCCCTGTCGGTGTTACAGGCGCTTAACGAGTTATCCTTCGTAACGATAGCATCTTGTTTGCCGTGTAGCTTTATGTCCGTTCTACACTGAACACCGGACCGCCACGAGCGTCCGATCCCGTCGGTTGTTCACTGAACTTTAACACTGTGCATTAGTGACTATTGATCCGCATGCTCCAAAAACAAGTCAGAAAATCTCTGCTTCACTTCTGATGGACACTAACCGACCCTGTTAAAAGACACCGGACCGCTAACCGAGGCATGTGTTCTGTTTGTACGTGTGCGTCGTCTAACCAAGCACTTGAAAACCTTCTTTAGAGACCGTTCCAAACACAGTAACTTTAGCTGTACGATGTTCCAGTGACGCGAGCAGTAGAATGGCGAGAACGTTTCCGTTGGTGCTgaatattcatgtatttttttattctggattTTCAGTATGCTTTTCAATTTTTTAATATGAGCTGTGTATGCACTACAGTTGTACGTGTTAACGTATTATGTTTATCTCATGAGAAAGTGCAAATAAAACCCCCTTCAACCTCA

Function

symbol description
dpysl5a Predicted to enable hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds and microtubule binding activity. Predicted to act upstream of or within axon guidance. Predicted to be located in cytoplasm. Is expressed in nervous system; spinal cord neural tube; and trigeminal placode. Orthologous to human DPYSL5 (dihydropyrimidinase like 5).
dpysl5 Predicted to enable hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds and microtubule binding activity. Predicted to be involved in nervous system development and signal transduction. Predicted to be located in cytosol.

NR:

description
PREDICTED: dihydropyrimidinase-related protein 5-like

GO:

id name namespace
GO:0006208 pyrimidine nucleobase catabolic process biological_process
GO:0005737 cytoplasm cellular_component
GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides molecular_function

KEGG:

id description
K07529 DPYSL5, CRAM; dihydropyrimidinase-like 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043262152.1 True 3306 mRNA 0.48 13 14861336 14876524

Neighbor

gene id symbol gene type direction distance location
mapre3a mapre3a,LOC107594695,LOC107679788,LOC107666269,LOC107752746,LOC107741846,LOC108425644 coding downstream 886 14851294 ~ 14860450 (-)
senp6b LOC107752747,LOC107679785 coding downstream 11453 14843023 ~ 14849883 (-)
colec11 colec11 coding downstream 120788 14735161 ~ 14740548 (-)
sox11a sox11a,LOC107752751,LOC107594691,LOC107679744 coding downstream 349673 14509772 ~ 14511663 (-)
LOC122361878 LOC107594701,LOC107679774 coding downstream 454660 14399105 ~ 14406676 (-)
dnmt3ab LOC107679796,LOC107752744,LOC107600869 coding upstream 4930 14881454 ~ 14924493 (-)
dtnbb LOC107600868,LOC107741848,LOC108425647 coding upstream 50642 14927166 ~ 14969227 (-)
asxl2 asxl2,LOC107679772,LOC107666255 coding upstream 94376 14970900 ~ 14987934 (-)
kif3cb kif3cb,LOC107594701,LOC107679774,LOC107752740,LOC107741850,LOC107600866,LOC107666256 coding upstream 113136 14989660 ~ 14994515 (-)
zfp36l1a zfp36l1a,LOC107752727,LOC107577075,LOC107679798,LOC107666263,LOC107600858,LOC107741857 coding upstream 336348 15212872 ~ 15218170 (-)
G121123 NA non-coding downstream 69268 14790929 ~ 14792068 (-)
G121096 LOC107752749,LOC107594711,LOC107666252 non-coding downstream 84227 14776886 ~ 14777109 (-)
LOC122361512 NA non-coding downstream 280468 14462125 ~ 14580868 (-)
G121069 NA non-coding downstream 404547 14451623 ~ 14456789 (-)
G121051 NA non-coding downstream 469294 14391384 ~ 14392042 (-)
G121214 NA non-coding upstream 163199 15039723 ~ 15045366 (-)
LOC122361632 NA non-coding upstream 325172 15201696 ~ 15210544 (-)
G121269 NA non-coding upstream 397559 15274083 ~ 15274615 (-)
G121301 NA non-coding upstream 436041 15312565 ~ 15313252 (-)
G121320 NA non-coding upstream 518481 15395005 ~ 15395362 (-)
myo6b myo6b,LOC107741840,LOC107594692,LOC107679792,LOC107600844,LOC107666253 other downstream 21523 14792186 ~ 14839813 (-)
LOC122361652 LOC107679745,LOC107752800,LOC107594718 other downstream 127759 14709491 ~ 14733577 (-)
kidins220a id2a,id2,kidins220,LOC107579075,LOC107707685,LOC107553286,LOC107655320,LOC107752760 other downstream 821125 13981547 ~ 14040211 (-)
LOC122361883 LOC107592775,LOC107752809,LOC100537549,LOC108433935,LOC107733136,LOC107674087 other downstream 1660644 13193177 ~ 13200692 (-)
G120660 LOC107752798,LOC107592762,LOC107697764,LOC107733171 other downstream 2040668 12817192 ~ 12820668 (-)
ptgr2 ptgr2 other upstream 134302 15010826 ~ 15026415 (-)
crip1 crip1,LOC106611282,LOC107679815,LOC107594706,LOC107600860 other upstream 183469 15059993 ~ 15064678 (-)
crip2 crip2,LOC107594708,LOC107752734,LOC107679813,LOC107666262,LOC107741856,LOC107600859 other upstream 207294 15083818 ~ 15099957 (-)
pax9 pax9,LOC107679748,LOC107666242,LOC107741874 other upstream 521264 15397788 ~ 15406503 (-)
LOC122361708 LOC107598628,LOC107708961,LOC107654010,LOC107719547,LOC107664629,LOC107557341 other upstream 807137 15683661 ~ 15688440 (-)

Expression


Co-expression Network