rps6ka5 (rps6ka5,LOC107582903,LOC107730213,LOC107741860,LOC107679795,LOC107600856,LOC107666260)


Basic Information

Item Value
gene id rps6ka5
gene name rps6ka5,LOC107582903,LOC107730213,LOC107741860,LOC107679795,LOC107600856,LOC107666260
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056715.1
NCBI id CM032084.1
chromosome length 22256391
location 15483111 ~ 15505931 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043262250.1
ACGGGGCTCGGCGTGCGTGTCTCTGTTAGTGCAGCTGTAGTATTTACAGCCCCGCTGCCCTTCCCACGAGAATGCAGCTATCgtcatttacattgttttccGAAAGGTTGCTTTCCAGCACCGACTCCGTGTATGTAATCCTGCTGTGACCGTCCCCGTCGCAGCGTTCGCATTAGTGTCGTGCGGCGAGCCGAGGAGAGAGCGCGCGCTACAGTCACGCGAGTAATGCCGTCTACGATGGAGGGCTCGTCGGGGGAAGGTGACCTGTTTACCGTCAAACACGAGCTCAGAAACGCCAATCTGACGGGTCACGTGGAGCGGGTGGGCATTGAGAACTTTGAGCTGCTGAAAGTGCTGGGAACAGGAGCCTACGGCAAGGTGTTCTTGGTTCGCAAGGTGAGCGGCCATGATTCGGGCAAACTCTATGCCATGAAGGTGTTGAAAAAGGCCACAATTGTGCAGAAGGCGAAGACGGCGGAGCACACGCGCACCGAGAGACAGGTCCTGGAGCATATCAGACAGTCTCCTTTCCTGGTTACGCTCCATTATGCCTTCCAGACAGACACCAAACTGCATCTCATTCTAGACTATGTGAATGGAGGTGAGCTCTTCACACACTTGGTCCAAAGAGTTCGCTTTAAAGAACAAGAGGTTACCTTGTACAGCGGGGAGATTGTACTAGCACTGGAGCACTTGCATAAGctgggAATCGTCTACAGAGACCTAAAACTTGAGAACATACTTCTGGATTCAAACGGCCACATCGTGTTGACAGACTTTGGCCTTAGTAAGGAGTTTCACGAGGTAGAGAGGGCTTATTCCATCTGCGGCACTATCGAGTACATGGCTCCTGAGATTGTAGCCGGAGGAGAGTCAGGACATGACAAGGCAGTGGACTGGTGGAGTATGGGAGTTCTGATGTATGAGCTGTTGACCGGAGGCTCTCCTTTCACTGTCGATGGAGACgagaactctcattctgacatTGCTgaGAGAATCATGAAAAAGGATCCTCCTTTCTCCAAAGACATGGGGTCTCTGGCCAAAGACATTATACAGCGACTGCTTATTAAAGACCCAAAGAAGAGGCTGGGCTCCGGGCCTTCAGGGGCCCTGAATGTGAAAAGCCATCCATTTTACCAGAAAATGAATTGGGAGGATCTAGCTGCTAAGAAGGTTCCGGCTCCGTTTAAGCCAGTGATTCGTGATGAACTGGATGTTAGCAACTTTGCTGAGGAGTTTACGGAGATGGACCCAACGTACTCCCCAGCGGCTCTTCCAAACAACTGTGACCGCATCTTCCAGGGCTATTCCTTCATGGCTCCTTCCATCCTGTTTAAGAGGAATGCTGTGATGGACGACCCGGCTCAGCTGTGCGGCGGCTCGGAGAGGCCGGGCTCTGCCGCTGTTGCCCGTAGCGCTATGATGAAGGACTCTCCGTTCTACATGAACTATGAGATGAATCTGAGAGAGAACGCTCTGGGAGAGGGAAGCTTCTCCATCTGCAGACAGTGCACTCACAAAAAGACCGGACAGAAATACGCCGTAAAGATCGTCAGTAAAAGAATGGAGgcacagacacagaaagagaTCGCTGCCCTCAAACTGTGTGATGGACACCCCAACATAGTCAAGCTACATGAGATCTACCATGACCAGCTGCACACGTATCTTGTTCTGGAGCTCCTGCAAGGTGGAGAGCTTCTGGAGAGGATCAGAAGGAAGCAGCACTTCAGCGAGACGGAGGCCAGCCGCATCATGCGCAGGCTGGTGTCTGCCGTCAGCCATATGCATGACGTCGGTGTGGTGCACAGGGACCTCAAACCTGAGAATTTGCTCTTCACGGATGACACTGAGAATTCGGAGATTAAAGTCATTGACTTCGGCTTTGCGCGGCTCAAACCCCCCGACAATCAGCTCTTGAAGACCCCCTGCTTCACTCTTCAGTACGCTGCACCAGAAATCCTCAAATATGACGGTTATGATGAGTCCTGTGACCTCTGGAGTTTAGGAGTTATTTTGtataCAATGCTATCTGGCCAGGTCCCATTTCAGTGCCACGGGAAGAGTCTAATGCACACCACTGCAGAAGAAATTATGAGGAAGATCAAACAAGGAGACTTCTCTTCCGAAGGCGAGGCCTGGAAGAATGTGTCAAATCAGGCCAAAGATCTGATACAAGAGCTGCTGACGGTGGACCCTGACAAGCGGATAAAAATGTGTGGCCTACGCTATAACGCCTGGCTGCAGGACGACAGTCAGCTCTCTTCCAATCCTCTCATGACCCCTGACATCCTGGGATCTTCTACCATATCAGTGCACACCTGCGTCAAAGCCACCTTTaatGCCTTTAATAAGTGTAAGCGGGAGGGCTTCCGACTCCAGACAGTTGATAAGGCTCCTTTGGCCAAACGCAGAAAGATGAAGAAGACCAGCACCAGCACAGAGACCCGAAGCAGCTCCAGCGAGAGCACACACtcatcatcctcttcctccCATTTTCAGGATAAGACACCGCCAGGTGGAGAGACGGCCATTATTCCCCAGGCCTCTTTGAGCACACCTCTCACTCTGGGCCCTGAAGACGAGCCCTCTCAGGGCGAACCCCAGCCTGCCTTCACATTCACCGAGTAAATCCGTCTTGAGAGTCAGGCAACGGAATAGGTTACGTAATTAGTATGCATAATTATCCCACTGTTTTTCTCCTCGCGCTCTGGCGACGCGGTACAACTCCTGAATTTGCATGCTGGGACCGACTCAAATCCATCACTAGCAATAGACGCATACCGTGAGTGGCTGAAGCATACCATGAGCTTGAGAGAACTTTTAGCTCAAGTCCTGCATGGCGAAAAATCACTGCATCCAGTCCAGTGTCTCAAACAGGAGGGAAAACTTCAAACCATCCACTGGTGGTGGAAAAAAGTCTGCTTCTGCAGTGTCCTGAAAGACCAGGCACTTTTCTTTGGGCAAAAAAGGAGA
>XM_043262251.1
GTGCAGAAGGCGAAGACGGCGGAGCACACGCGCACCGAGAGACAGGTCCTGGAGCATATCAGACAGTCTCCTTTCCTGGTTACGCTCCATTATGCCTTCCAGACAGACACCAAACTGCATCTCATTCTAGctgggAATCGTCTACAGAGACCTAAAACTTGAGAACATACTTCTGGATTCAAACGGCCACATCGTGTTGACAGACTTTGGCCTTAGTAAGGAGTTTCACGAGGTAGAGAGGGCTTATTCCATCTGCGGCACTATCGAGTACATGGCTCCTGAGATTGTAGCCGGAGGAGAGTCAGGACATGACAAGGCAGTGGACTGGTGGAGTATGGGAGTTCTGATGTATGAGCTGTTGACCGGAGGCTCTCCTTTCACTGTCGATGGAGACgagaactctcattctgacatTGCTgaGAGAATCATGAAAAAGGATCCTCCTTTCTCCAAAGACATGGGGTCTCTGGCCAAAGACATTATACAGCGACTGCTTATTAAAGACCCAAAGAAGAGGCTGGGCTCCGGGCCTTCAGGGGCCCTGAATGTGAAAAGCCATCCATTTTACCAGAAAATGAATTGGGAGGATCTAGCTGCTAAGAAGGTTCCGGCTCCGTTTAAGCCAGTGATTCGTGATGAACTGGATGTTAGCAACTTTGCTGAGGAGTTTACGGAGATGGACCCAACGTACTCCCCAGCGGCTCTTCCAAACAACTGTGACCGCATCTTCCAGGGCTATTCCTTCATGGCTCCTTCCATCCTGTTTAAGAGGAATGCTGTGATGGACGACCCGGCTCAGCTGTGCGGCGGCTCGGAGAGGCCGGGCTCTGCCGCTGTTGCCCGTAGCGCTATGATGAAGGACTCTCCGTTCTACATGAACTATGAGATGAATCTGAGAGAGAACGCTCTGGGAGAGGGAAGCTTCTCCATCTGCAGACAGTGCACTCACAAAAAGACCGGACAGAAATACGCCGTAAAGATCGTCAGTAAAAGAATGGAGgcacagacacagaaagagaTCGCTGCCCTCAAACTGTGTGATGGACACCCCAACATAGTCAAGCTACATGAGATCTACCATGACCAGCTGCACACGTATCTTGTTCTGGAGCTCCTGCAAGGTGGAGAGCTTCTGGAGAGGATCAGAAGGAAGCAGCACTTCAGCGAGACGGAGGCCAGCCGCATCATGCGCAGGCTGGTGTCTGCCGTCAGCCATATGCATGACGTCGGTGTGGTGCACAGGGACCTCAAACCTGAGAATTTGCTCTTCACGGATGACACTGAGAATTCGGAGATTAAAGTCATTGACTTCGGCTTTGCGCGGCTCAAACCCCCCGACAATCAGCTCTTGAAGACCCCCTGCTTCACTCTTCAGTACGCTGCACCAGAAATCCTCAAATATGACGGTTATGATGAGTCCTGTGACCTCTGGAGTTTAGGAGTTATTTTGtataCAATGCTATCTGGCCAGGTCCCATTTCAGTGCCACGGGAAGAGTCTAATGCACACCACTGCAGAAGAAATTATGAGGAAGATCAAACAAGGAGACTTCTCTTCCGAAGGCGAGGCCTGGAAGAATGTGTCAAATCAGGCCAAAGATCTGATACAAGAGCTGCTGACGGTGGACCCTGACAAGCGGATAAAAATGTGTGGCCTACGCTATAACGCCTGGCTGCAGGACGACAGTCAGCTCTCTTCCAATCCTCTCATGACCCCTGACATCCTGGGATCTTCTACCATATCAGTGCACACCTGCGTCAAAGCCACCTTTaatGCCTTTAATAAGTGTAAGCGGGAGGGCTTCCGACTCCAGACAGTTGATAAGGCTCCTTTGGCCAAACGCAGAAAGATGAAGAAGACCAGCACCAGCACAGAGACCCGAAGCAGCTCCAGCGAGAGCACACACtcatcatcctcttcctccCATTTTCAGGATAAGACACCGCCAGGTGGAGAGACGGCCATTATTCCCCAGGCCTCTTTGAGCACACCTCTCACTCTGGGCCCTGAAGACGAGCCCTCTCAGGGCGAACCCCAGCCTGCCTTCACATTCACCGAGTAAATCCGTCTTGAGAGTCAGGCAACGGAATAGGTTACGTAATTAGTATGCATAATTATCCCACTGTTTTTCTCCTCGCGCTCTGGCGACGCGGTACAACTCCTGAATTTGCATGCTGGGACCGACTCAAATCCATCACTAGCAATAGACGCATACCGTGAGTGGCTGAAGCATACCATGAGCTTGAGAGAACTTTTAGCTCAAGTCCTGCATGGCGAAAAATCACTGCATCCAGTCCAGTGTCTCAAACAGGAGGGAAAACTTCAAACCATCCACTGGTGGTGGAAAAAAGTCTGCTTCTGCAGTGTCCTGAAAGACCAGGCACTTTTCTTTGGGCAAAAAAGGAGA

Function

symbol description
rps6ka5 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in histone phosphorylation; peptidyl-serine phosphorylation; and regulation of transcription, DNA-templated. Predicted to act upstream of or within intracellular signal transduction and protein phosphorylation. Predicted to be active in cytoplasm and nucleoplasm. Orthologous to human RPS6KA5 (ribosomal protein S6 kinase A5).

NR:

description
ribosomal protein S6 kinase alpha-5-like, partial

GO: NA

KEGG:

id description
K04445 RPS6KA5, MSK1; ribosomal protein S6 kinase alpha-5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043262250.1 True 2979 mRNA 0.51 17 15483111 15505931
XM_043262251.1 False 2407 mRNA 0.51 14 15483111 15502687

Neighbor

gene id symbol gene type direction distance location
zfp36l1a zfp36l1a,LOC107752727,LOC107577075,LOC107679798,LOC107666263,LOC107600858,LOC107741857 coding downstream 264941 15212872 ~ 15218170 (-)
kif3cb kif3cb,LOC107594701,LOC107679774,LOC107752740,LOC107741850,LOC107600866,LOC107666256 coding downstream 488596 14989660 ~ 14994515 (-)
asxl2 asxl2,LOC107679772,LOC107666255 coding downstream 495177 14970900 ~ 14987934 (-)
dtnbb LOC107600868,LOC107741848,LOC108425647 coding downstream 513884 14927166 ~ 14969227 (-)
dnmt3ab LOC107679796,LOC107752744,LOC107600869 coding downstream 558618 14881454 ~ 14924493 (-)
LOC122361840 c17h14orf159,LOC107730207,LOC107679776 coding upstream 343534 15849465 ~ 15858684 (-)
slc24a4a slc24a4a,LOC107679778,LOC107730209,LOC107662654,LOC107602265,LOC107582941 coding upstream 352793 15858724 ~ 15890289 (-)
LOC122362058 crim1,LOC107679775,LOC107662656,LOC107582940 coding upstream 446651 15952582 ~ 16000711 (-)
LOC122362009 crim1,LOC107679775,LOC107662656,LOC106611167 coding upstream 612191 16118122 ~ 16207614 (-)
gpr132a LOC107679764,LOC107752700,LOC107569010,LOC107732878,LOC107662643 coding upstream 932299 16438230 ~ 16440346 (-)
G121326 NA non-coding downstream 67958 15414869 ~ 15415153 (-)
G121324 NA non-coding downstream 70408 15412465 ~ 15412703 (-)
G121323 NA non-coding downstream 71851 15411042 ~ 15411260 (-)
G121321 NA non-coding downstream 87003 15395897 ~ 15396108 (-)
G121320 NA non-coding downstream 87749 15395005 ~ 15395362 (-)
G121343 cdan1 non-coding upstream 11005 15516936 ~ 15518082 (-)
G121427 NA non-coding upstream 95335 15601266 ~ 15678209 (-)
G121450 NA non-coding upstream 207479 15713410 ~ 15720323 (-)
G121507 NA non-coding upstream 780191 16286122 ~ 16286403 (-)
G121509 NA non-coding upstream 828112 16334043 ~ 16334439 (-)
pax9 pax9,LOC107679748,LOC107666242,LOC107741874 other downstream 76608 15397788 ~ 15406503 (-)
crip2 crip2,LOC107594708,LOC107752734,LOC107679813,LOC107666262,LOC107741856,LOC107600859 other downstream 383154 15083818 ~ 15099957 (-)
crip1 crip1,LOC106611282,LOC107679815,LOC107594706,LOC107600860 other downstream 418433 15059993 ~ 15064678 (-)
ptgr2 ptgr2 other downstream 456696 15010826 ~ 15026415 (-)
myo6b myo6b,LOC107741840,LOC107594692,LOC107679792,LOC107600844,LOC107666253 other downstream 643298 14792186 ~ 14839813 (-)
LOC122361708 LOC107598628,LOC107708961,LOC107654010,LOC107719547,LOC107664629,LOC107557341 other upstream 177730 15683661 ~ 15688440 (-)
G121438 LOC107708961,LOC107664629,LOC107654010,LOC107719547 other upstream 182960 15688891 ~ 15689794 (-)
G121456 LOC107660450 other upstream 232331 15738262 ~ 15740486 (-)
LOC122362003 LOC107664362,LOC107560152,LOC107752022,LOC107658150 other upstream 254412 15760343 ~ 15767015 (-)
LOC122362005 crim1,LOC107582940,LOC107679775,LOC107662656 other upstream 323553 15829484 ~ 15951438 (-)

Expression


Co-expression Network