LOC122361502 (asns,LOC107731557,LOC107702657,LOC107754811,LOC107672863,LOC108410560)


Basic Information

Item Value
gene id LOC122361502
gene name asns,LOC107731557,LOC107702657,LOC107754811,LOC107672863,LOC108410560
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056715.1
NCBI id CM032084.1
chromosome length 22256391
location 20650588 ~ 20659108 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043262286.1
CTCTCGCATAGACGGGAGACAACGGGACAAATATCTAGAAAGGCAGCACGTGTATTTCATCAGCCGAACCTCGCTGAAGAAAAACTCGCACTTCAACCGACAGAGACCAAAGCTTCTTTTCAAAtATCAGAATGTGTGGTATATGGGCCTTGTTTGGTAGTGATGAGTGCCTCGCAGTTCAGTGCACCAGTGCCATGAAGATTGCGCATCGCGGTCCAGATGCTTTCCGCTTTGAGAATGTCAATGGTTTCACCAACTGCTGCTTTGGATTTCACCGCCTCGCTATTGTGGATCAGCTGTATGGGATGCAGCCTCTGCGTGTCAAGAAGTTTCCCTACCTCTGGCTATGTTACAACGGAGAAATCTACAACCATATTAGTCTGAAGGAGAACTTTGAGTTCGAGTATCAGACCAAAGTCGATGGAGAGATTCTTCTGCACCTGTACGATCGCTTTGGGATCCAGAAGATGGCCAGTCTGCTAGATGGAGTATTCGCATTCGTCTTGTTGGATACTGCTAACAAAAAGGTCTTCTTAGGGAGGGACACATACGGTGTGAGACCGCTCTTCAAACTGCTCACTGATGATGGCTTTCTAGCTGTCTGTTCTGAAGCCAAAGGTTTGACTCGCATCACACACTCCATGTCCTCCCCTGCAAAGATCACCCCCTTCCCTCCAGGACACGTTGAGGAGTTTAACTTGAAGCCCACTGGAAAAGTGGAGTCTGTGCTGATGGATCGCTTCCACTGCTGCACGGAAGAACCTAAACATGCCTCCTATAACAATCTTGAGGGTTTTGGCAcagGCTTTGAATTGGAGACCGTCACAAAAAACATTCGAATGCTGTTTGAAAATGCTGTTAAGAAACGCTTGATGGCTCACAGAAGAATTGGATGCCTCCTCTCAGGTGGACTCGATTCAAGTCTGGTTGCTGCAACTCTCGTGAAACTGGCCAAAGAAGAGGAGCTTCCGTATCGCATTCAGACCTTTGCCATTGGTGCAGATGACAGCCCAGATGTTGTTGCTGCTCGCAAGGTGGCAGCCTACATTGACAGCGAACACCATGAGGTGAGCTTCACACCTGAGGAAGGTATCCGTGCCCTGGAAGAAGTCATCTTTCACTTGGAGAGTTATGACATCACCACTGTGCGTGCCTCTGTTGgtatGTACCTGATATCAAAGTACATCCGTGAGAAGACGGACAGCGTTGTGATTTTCTCTGGTGAAGGTTCTGATGAGCTGTCACAAGGATACATCTACTTTCATAAGGCACCGTCTCCTACAGCGGGCGCTGAGGAAAGCGTGCGTCTGCTGAAAGAGCTTTATCTGTTTGATGTGCTGAGAGCGGACAGAACCACAGCTGCACACGGACTGGAGTTGAGAGTGCCTTTCCTGGACCATAGATTCACTGCATACTACCTCTCTGTCCCTGAAGAGATGAGAGCCCCTAAGGACGGTGTGGAGAAGCATCTCTTGAGGGAATCGTTTAAAGGGGTGAAACTCATCCCAGATGAGATTCTCTGGAGAAGGAAAGAGGCCTTCAGTGACGGTATGACATCCATGAAGAAGTCCTGGTACACAAGCCTGCAGGAGCACATCGAGTCTGAGgtgAACGACGTTCAGTTGGAAAATGCTGCCAAGCTGTTCCCTTTCAACCCCCCCACAACCAAAGAGGGCTTCTACTTCAGGCAGGTCTTTGAGAAGATGTACCCCGGCCGCTGCGAGTGGACACCGCATTACTGGATGCCCCGCTGGATCAAGGCCACGGACCCCTCGGCCAGAACCCTGTCCATCTACAAGCCCGATAAAGACCAGTAATCGCATCAAACTTCAAAACTTGACTAGAGGTTACATCCACTACAGCATACACATCTGCCTCATGAAATGAGCTAAATTCAAGTCTTTAGGGTGGTTTTAGTCTTTCTCAAAGAGAGCTCAATTTGTTACTGCTCAATTCTCCCCGGATCAACGTTATACAGAGTATAACTTCAAAGATATGCAatgacattttgaaatcaaGGCTATGCTATtgtattcatgtaaaaaaaaatttaatgtaagcgtatgcacttttttttcctcctcaaatATCTTCAaggtttatattaatataaaaaaacttggGAACTGAAGCAGGTTGGCTCAGCTAAGAAAAAAAGGTGTATAGGTTCAGATtgacataatatattatttgagCATGGCCActttcaattttgggtgaaatattccattatttatttctatttaataacAACAGTTGTTACTGTTGAATGTCTTTTAAAGGTTTAGTGCTTGGCACTGGTTGGAGTAATAACCATTTAGCCTTATAGGAAGTCAGTGGAACTAAGATTGTTTCAACACTTGATGTAATGTTGTGCACAAACACCataatctgatttaaaaaaaaaaaaaaaaaaactaaattataaatttCAGTGTATgtaacatgaatatttaaaatattttcaacctCCTGCACTCAGTGCTTAAAGACTAGAATTACTTTTGAGTATTTATGTGTGCTTAAGTTAGTAGTTTGAAAGGTCTGGTCATAGAATAAAGATCTTATTCGGAATATCTTAA

Function

symbol description
asns Predicted to enable asparagine synthase (glutamine-hydrolyzing) activity. Predicted to be involved in asparagine biosynthetic process. Predicted to act upstream of or within cellular amino acid biosynthetic process and glutamine metabolic process. Predicted to be active in cytosol. Is expressed in liver and male organism. Orthologous to human ASNS (asparagine synthetase (glutamine-hydrolyzing)).

NR:

description
PREDICTED: asparagine synthetase [glutamine-hydrolyzing]-like

GO:

id name namespace
GO:0070981 L-asparagine biosynthetic process biological_process
GO:0005524 ATP binding molecular_function
GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity molecular_function

KEGG:

id description
K01953 asnB, ASNS; asparagine synthase (glutamine-hydrolysing)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043262286.1 True 2582 mRNA 0.44 12 20650588 20659108

Neighbor

gene id symbol gene type direction distance location
LOC122361585 NA coding downstream 123013 20526019 ~ 20527575 (-)
LOC122362405 NA coding downstream 380886 20269585 ~ 20269702 (-)
LOC122362424 NA coding downstream 389762 20260708 ~ 20260826 (-)
LOC122362404 NA coding downstream 391271 20259199 ~ 20259317 (-)
LOC122362406 NA coding downstream 392791 20257678 ~ 20257797 (-)
LOC122361508 aspg,LOC107739215 coding upstream 21354 20680462 ~ 20688555 (-)
LOC122361456 NA coding upstream 39953 20699061 ~ 20725343 (-)
LOC122361586 LOC107739219,LOC107679812,LOC107662604,LOC107732422,LOC107586859,LOC107679809,LOC107559908 coding upstream 129002 20788110 ~ 20798977 (-)
LOC122361898 LOC107679809,LOC107739222,LOC107559908 coding upstream 135913 20795021 ~ 20797384 (-)
vcpkmt vcpkmt,LOC107559878,LOC107687351 coding upstream 140945 20800053 ~ 20801973 (-)
G122628 NA non-coding downstream 10176 20595306 ~ 20640412 (-)
G122625 NA non-coding downstream 121677 20525065 ~ 20528911 (-)
G122594 NA non-coding downstream 482947 20167024 ~ 20167641 (-)
G122566 NA non-coding downstream 831401 19818960 ~ 19819187 (-)
G122556 NA non-coding downstream 851190 19798722 ~ 19799398 (-)
G122754 NA non-coding upstream 196014 20855122 ~ 20857658 (-)
G122775 NA non-coding upstream 199163 20858271 ~ 20861117 (-)
G122783 NA non-coding upstream 215664 20874772 ~ 20875152 (-)
G122786 NA non-coding upstream 220898 20880006 ~ 20880453 (-)
G122788 NA non-coding upstream 227080 20886188 ~ 20886913 (-)
LOC122362234 kif26a,kif26ab,LOC107739214,LOC107662598,LOC107732702,LOC107559913,LOC107586892 other downstream 14429 20556723 ~ 20636159 (-)
LOC122362030 cldn20,tfb1m,LOC101886267,LOC107571061,LOC107675320,LOC107573130,LOC107728965,LOC108443299,LOC108269830,LOC107680107,LOC107728964,LOC107675319 other downstream 597449 19824459 ~ 20053139 (-)
ralgapa2 ralgapa2,LOC107687934 other downstream 1368132 19147331 ~ 19282456 (-)
LOC122362226 vps39,LOC107707670,LOC107572021,LOC107687842,LOC107558491,LOC107687939,LOC107758712 other downstream 1813968 18819663 ~ 18836620 (-)
G122247 NA other downstream 1859708 18786882 ~ 18790880 (-)
aspg aspg,LOC107586863,LOC107739215,LOC107732472,LOC107662599 other upstream 98608 20757716 ~ 20770229 (-)
nenf nenf,LOC107739254,LOC107664444,LOC107732830,LOC107662615,LOC107586886 other upstream 256093 20915201 ~ 20916639 (-)
tmem63c tmem63c,LOC107732232 other upstream 418953 21078061 ~ 21116556 (-)
G123095 NA other upstream 1082410 21741518 ~ 21742973 (-)
LOC122362121 gskip,LOC107731910,LOC107561679,LOC107664426 other upstream 1084582 21743690 ~ 21748036 (-)

Expression


Co-expression Network