angel1 (angel1)


Basic Information

Item Value
gene id angel1
gene name angel1
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056715.1
NCBI id CM032084.1
chromosome length 22256391
location 17465870 ~ 17505049 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043262328.1
TCGTCACGCCGGGAACGCCCCCTCGCGTCCGGTGCAGGTGATTAAGTCGGCGTGCGGTCCGCCGGTGGTCATGATCGCGACTGTGATGTTTTACGCGCTGTATCCTCTCTCGAGGCTCATCGGCAGAGTTTCAGAACTGTGGTGCAAGGCTCCGTTTGTGTACATTAATGGCAAAGAGGTTTGGGATGGTGGCGGTGCTCTTTCTGGACAGCAGCAGACGAGCCTGTTACTGCGGTGGAACAGCACAGAAAACACCAACACTGCTCCTGATCCAGACCACATGGACGCTGAGAGTCCTCACGGAGCTGTGGTAGATCTGCTGGATGTCTGTGAGGTGAAAAAGACACAAGAAGAGTTGAACCAGGAGGAAATGCATGAAGACGTGCACAAATCAGTGCGTTCCTTCAGTCAGATGGAAGCTCCTTCAGTCTCTGTGTGTGATGGAAGTGTTGCTTTGAGAGCGTGTGATTGGTCAGAGAGTGACGTACACCTCTCAGAATCAGCGCTCCGGGGTTTAGAAGATCCTGTGATAAAAGAGTCTGCGTTTCCCAATACTGAATATCAGAGTCTCTCAGACATTGATAACGTGCTCTCTGAATTCAAGCAGCTCGGGGCTCATGATGAAATGGCCGACCGTGATGACCGTGAGGTGGATTCGTTCATGTCAGATAGACTCGCTTCACTCGCTCCCAGCACCGACCTCTTCCTGGGGTTTGATTCTGAGGCTGGAAATGAAGCCCTTGGCAGCCCGGTGTTTGATTTGGCGGCTTTGCTCGCAGACTCTCAGCAGGTTAAGGCACCGGCGGAGCCTGTCGGCTGGCACTTTCCCGTCGGCCTTGGCCTGTCACAGATGTGTTACTGCCCTTATGTGCACTTTCCTGACGTCAGCTACTATCCTGCGCTTCAGGACAATGACAACATTGAAGTGATGTGGCGGGTGTGGGAGGATCTTGAAACCCAGACCAGTTCCTGTGAGGACACAGCTGCTGTGTTTGACTTCAGCATCATGTCTTACAACATTTTGGCTCAGGATCTGCTAGAAGTGAACCCACAGCTGTACACACACTGTCCAGAGGAAGTGTTAGTGTGGGACCAGCGACTCCGGACCATTCTGAAGGAGCTCCAGATTTGGCAACCTGATATTATTTGTCTTCAGGAAGTTCAAGAAGATCATTTCCTAGAGCAGATCTATCCTGTCCTGACTGACATGGGTTACACCTGCATCTACAAACGCCGCACTGGCACCAAAACGGATGGCTGTGCGGTGTGTTATCACAGTGAGCGCTTTACCCAGCTTTCCGTCAATCTGCTGGAGTTTCGACATTCAGACTGTGAGCTACTGGATCGTGACAACGTGGCCGTTGTGGTGCTCCTCCAGCCGATGGCCGGGCAGAATATAGCTTTCAGCCCCATATGTGTGGCCAACACACACCTGCTGTTCAACCCCAGGAGAGGAGATGTGAAGCTCGCCCAGCTGGCCATCGTGTTTGCGGAAATTGACATCATGATCAAAAAATGCAGGAGTGAAGGAGGACACTGTGAGGTGGTTTTATGTGGAGACTTTAACGCTTTACCCAGCAGCCCTCTGTGGAATTTCATCACCACCGGACAGCTTTACTACCAAGGCTTACCTGCTTGGATGGTCTCAGGTCAGGTGGATTTGTCCTATAAAGTCCATCACTCCAGGCTTTTCTCTCCGCTGTGGCCCAGAAGCCTCGGCATCACTGACGGCTGTCAGTACAGGTCTTCCACACAGACCACAGCTTCAGACCCTCGTCAATACAGCACTGAGTTTCTGTGTCAGCTGCGATACTGTCCGGCGGCGTGCGTGCGCCCCGCTGATCTGGAGCTCATACCAGGAGTCACCGACAAAACACCAGACCCTGAAGACATGGAGATGTTTAGTTCAAGGTTTGGACACACACTGCGTCACACACTGAACCTGAGGTCAGCTTACAGTCCTGTCCAGATGGACACACAGACTGCTGTGGTCAGCTCTCTGAACTCAGAGGGAGGAGCGATGGTCGACTACATCTTCTACTCCACCTGCAGGACCGGCTCCGCTGCAGCTGAAGAGAGCGCTGGAGGATTGAAGCTGCTGGCTCGTTTGTCTCTGCTGTCCGAGGCTGATCTCTGGTCTCTGCGAGGACTTCCTAACGAAACGTTTCCCTCGGATCATCTCAGTCTGATCGCCAAGCTTCGGCTACAGTCTGACTCTAAAATTTGACAAATGTAAGAATCGCTTGTCTTCATCATTTTCAGTgccttatatatttatatgatttagtTTAGTGATGGTTCGTGTGAAATATTCTCCAGCGTGGAGTCTGATGTGAGGAAACATGATGCTCCGGTTAAGGTTGACATGTTCAAGATAATGTGACTAGAAAGCAGTTACACGCATCTGTTAGttttcagtttctttcattttgagtttgaaaaaaaaaatatatatatatatatatttatatatatttattttgaacaaagctaaataaataactacatgCACTGCTGTTGTCTTTGCTGGTTGAACACACAAGCAAATGATGACAGGCAGCGTCTCCACAGCCACACGATGCTGTTATCGAAGGTCAGAATGATGGGATTTAGCgcatttgaagtgaaagtacTTGATAAACATATCCACTCAGTATCAGCTCATATTTGACCAAGATGGCTTTTGGAGGCCTTTGCATCTGAAATACATCAAAAACTTTTTCTTCAAGCTCAATGAAAAGAGGTTTGCAGAAAGTAATTCACCGCTAAAACCATGTTCATCCTCCCTGAACAAAAAGCTTGACTGGAAAATGCCCCCAAAAGATATTAAAATTCAAGTCAAATTAACTACAGGTAAAACTTTGCAGtaaaattaacatgaaaaaaaatgtatcattatttcttcatcttcaagttatatttaataaacccGAACTGAACTACTGCATTATAGTTAATAAAggttaataaatactttaacaTGAGCTATATATTTAAGCATTAACAAATAGAACGTTATTGTAATGTGGCAATTGTTTTCTAATACttgtgtgtgagatgtgatacatttataaataaactataacaTTAATCTA
>XM_043262329.1
TCGTCACGCCGGGAACGCCCCCTCGCGTCCGGTGCAGGTGATTAAGTCGGCGTGCGGTCCGCCGGTGGTCATGATCGCGACTGTGATGTTTTACGCGCTGTATCCTCTCTCGAGGCTCATCGGCAGAGTTTCAGAACTGTGGTGCAAGGCTCCGTTTGTGTACATTAATGGCAAAGAGGTTTGGGATGGTGGCGGTGCTCTTTCTGGACAGCAGCAGACGAGCCTGTTACTGCGGTGGAACAGCACAGAAAACACCAACACTGCTCCTGATCCAGACCACATGGACGCTGAGAGTCCTCACGGAGCTGTGGTAGATCTGCTGGATGTCTGTGAGGTGAAAAAGACACAAGAAGAGTTGAACCAGGAGGAAATGCATGAAGACGTGCACAAATCAGTGCGTTCCTTCAGTCAGATGGAAGCTCCTTCAGTCTCTGTGTGTGATGGAAGTGTTGCTTTGAGAGCGTGTGATTGGTCAGAGAGTGACGTACACCTCTCAGAATCAGCGCTCCGGGGTTTAGAAGATCCTGTGATAAAAGAGTCTGCGTTTCCCAATACTGAATATCAGAGTCTCTCAGACATTGATAACGTGCTCTCTGAATTCAAGCAGCTCGGGGCTCATGATGAAATGGCCGACCGTGATGACCGTGAGGTGGATTCGTTCATGTCAGATAGACTCGCTTCACTCGCTCCCAGCACCGACCTCTTCCTGGGGTTTGATTCTGAGGCTGGAAATGAAGCCCTTGGCAGCCCGGTGTTTGATTTGGCGGCTTTGCTCGCAGACTCTCAGCAGGTTAAGGCACCGGCGGAGCCTGTCGGCTGGCACTTTCCCGTCGGCCTTGGCCTGTCACAGATGTGTTACTGCCCTTATGTGCACTTTCCTGACGTCAGCTACTATCCTGCGCTTCAGGACAATGACAACATTGAAGTGATGTGGCGGGTGTGGGAGGATCTTGAAACCCAGACCAGTTCCTGTGAGGACACAGCTGCTGTGTTTGACTTCAGCATCATGTCTTACAACATTTTGGCTCAGGATCTGCTAGAAGTGAACCCACAGCTGTACACACACTGTCCAGAGGAAGTGTTAGTGTGGGACCAGCGACTCCGGACCATTCTGAAGGAGCTCCAGATTTGGCAACCTGATATTATTTGTCTTCAGGAAGTTCAAGAAGATCATTTCCTAGAGCAGATCTATCCTGTCCTGACTGACATGGGTTACACCTGCATCTACAAACGCCGCACTGGCACCAAAACGGATGGCTGTGCGGTGTGTTATCACAGTGAGCGCTTTACCCAGCTTTCCGTCAATCTGCTGGAGTTTCGACATTCAGACTGTGAGCTACTGGATCGTGACAACGTGGCCGTTGTGGTGCTCCTCCAGCCGATGGCCGGGCAGAATATAGCTTTCAGCCCCATATGTGTGGCCAACACACACCTGCTGTTCAACCCCAGGAGAGGAGATGTGAAGCTCGCCCAGCTGGCCATCGTGTTTGCGGAAATTGACATCATGATCAAAAAATGCAGGAGTGAAGGAGGACACTGTGAGGTGGTTTTATGTGGAGACTTTAACGCTTTACCCAGCAGCCCTCTGTGGAATTTCATCACCACCGGACAGCTTTACTACCAAGGCTTACCTGCTTGGATGGTCTCAGGTCAGGTGGATTTGTCCTATAAAGTCCATCACTCCAGGCTTTTCTCTCCGCTGTGGCCCAGAAGCCTCGGCATCACTGACGGCTGTCAGTACAGGTCTTCCACACAGACCACAGCTTCAGACCCTCGTCAATACAGCACTGAGTTTCTGTGTCAGCTGCGATACTGTCCGGCGGCGTGCGTGCGCCCCGCTGATCTGGAGCTCATACCAGGAGTCACCGACAAAACACCAGACCCTGAAGACATGGAGATGTTTAGTTCAAGGAGATCTACTGATGTTTGTCAGGTTTGGACACACACTGCGTCACACACTGAACCTGAGGTCAGCTTACAGTCCTGTCCAGATGGACACACAGACTGCTGTGGTCAGCTCTCTGAACTCAGAGGGAGGAGCGATGGTCGACTACATCTTCTACTCCACCTGCAGGACCGGCTCCGCTGCAGCTGAAGAGAGCGCTGGAGGATTGAAGCTGCTGGCTCGTTTGTCTCTGCTGTCCGAGGCTGATCTCTGGTCTCTGCGAGGACTTCCTAACGAAACGTTTCCCTCGGATCATCTCAGTCTGATCGCCAAGCTTCGGCTAC

Function

symbol description
angel1 Predicted to enable 3'-5'-exoribonuclease activity. Is expressed in female organism. Orthologous to human ANGEL1 (angel homolog 1).

NR:

description
protein angel homolog 1-like isoform X1

GO: NA

KEGG:

id description
K18729 ANGEL; protein angel

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043262328.1 True 3095 mRNA 0.47 10 17465870 17505049
XM_043262329.1 False 2229 mRNA 0.53 10 17466758 17505049

Neighbor

gene id symbol gene type direction distance location
cdin1 zgc:154061,LOC107665555,LOC107724250,LOC107678147,LOC107554791,LOC107568570 coding downstream 189327 17216049 ~ 17276543 (-)
spred1 LOC107724258,LOC107677686,LOC107749536,LOC107698617,LOC107573584 coding downstream 411572 17036069 ~ 17054298 (-)
fam98b LOC107698618,LOC107568575,LOC107749537 coding downstream 431468 17029621 ~ 17034402 (-)
atxn3 atxn3,LOC107687604 coding downstream 451390 17005300 ~ 17014480 (-)
serpina10b LOC107573596,LOC107575705,LOC107677687,LOC107573588 coding downstream 461212 17001561 ~ 17004658 (-)
LOC122362317 LOC107588350 coding upstream 17925 17522974 ~ 17528811 (-)
dlst dlst,LOC107702243,LOC107724251,LOC107749530,LOC107678142 coding upstream 38781 17543830 ~ 17559163 (-)
esrrb esrrb,LOC107678144 coding upstream 132541 17637590 ~ 17690815 (-)
LOC122361798 ift43,LOC107723274 coding upstream 287164 17792213 ~ 17808157 (-)
ttll5 ttll5 coding upstream 328273 17833322 ~ 17911030 (-)
G121734 NA non-coding downstream 250592 17215055 ~ 17215278 (-)
G121721 NA non-coding downstream 255610 17168223 ~ 17210260 (-)
G121717 meis2,LOC107724236 non-coding downstream 308641 17150512 ~ 17157229 (-)
G121711 meis2,meis2a,LOC107698619 non-coding downstream 316842 17136870 ~ 17149028 (-)
G121715 NA non-coding downstream 333144 17132518 ~ 17132726 (-)
G121852 NA non-coding upstream 77854 17582903 ~ 17583589 (-)
G121854 NA non-coding upstream 115171 17620220 ~ 17620671 (-)
G121905 tgfb3,LOC107688075,LOC107723269 non-coding upstream 285893 17790942 ~ 17810401 (-)
G121965 NA non-coding upstream 500225 18005274 ~ 18005603 (-)
G121980 NA non-coding upstream 565813 18070862 ~ 18132726 (-)
LOC122362005 crim1,LOC107582940,LOC107679775,LOC107662656 other downstream 1514432 15829484 ~ 15951438 (-)
LOC122362003 LOC107664362,LOC107560152,LOC107752022,LOC107658150 other downstream 1698855 15760343 ~ 15767015 (-)
G121456 LOC107660450 other downstream 1725384 15738262 ~ 15740486 (-)
G121438 LOC107708961,LOC107664629,LOC107654010,LOC107719547 other downstream 1776076 15688891 ~ 15689794 (-)
LOC122361708 LOC107598628,LOC107708961,LOC107654010,LOC107719547,LOC107664629,LOC107557341 other downstream 1777430 15683661 ~ 15688440 (-)
acyp1 acyp1 other upstream 457240 17962289 ~ 17963981 (-)
LOC122361562 otofb,LOC107752720,LOC107701524,LOC107723281,LOC108423539 other upstream 477002 17982051 ~ 18004214 (-)
LOC122361613 NA other upstream 774409 18279458 ~ 18281572 (-)
LOC122361943 NA other upstream 1126208 18631257 ~ 18644992 (-)
G122247 NA other upstream 1281833 18786882 ~ 18790880 (-)

Expression


Co-expression Network