fosaa (fosaa,fos,LOC107723273,LOC107702235,LOC108423428,LOC107735358)


Basic Information

Item Value
gene id fosaa
gene name fosaa,fos,LOC107723273,LOC107702235,LOC108423428,LOC107735358
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056715.1
NCBI id CM032084.1
chromosome length 22256391
location 17952048 ~ 17958595 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043262436.1
aaaaacacacacacatatgtcaAAACTCTGTCACGACTCttcacaaattaattacatagtCTATTTTAGACtgaaaactgcatttatataatattttagtgcAAATAGCCTGCCTTGTTGGCAGTATAACTTAACTTTGGGCTCAGTCATCATCAGTTTCAGTGATGCAGAAGGTGAAACATATGGCGAATATTATTTCGATACGATCGATGTAGGCACGAATCTGTCTTCTGATGATATGTTTCtcccattttacattttaaatcgcATCATTAAAGCATTCATGTTCAATAAcaatgaaggaaataatcaaaacGTTGAAAATAAAGTACTGGGTAGGATAGGTGTAGAGAGGGCTTTAATTTCCCAATAAGGGCGTCAACCATGGCATCTATTTaatgatttgaattaaaaatgagttCTAATGAActtcaatactgaggtgcagataactGCCACTTGCCCTTAAATAATGCTGCGTTTTCGATTGGTGTTAATAGAATCCatagcatctatgctaataaaatattctgCTTTCACTTAGTGCAAACAGCCGCTGCCAGTATTTTACCTTAGTGTTCGAACTCCAATCGGATCACGGatcgcgaatcatttgattcagaacggACTTCAAAGCGCGTTTCATCGATCATTTCATTCGGGATTCATTCAGCTGAGGCAGGGATGCATAGAGCAGTGAATAACATGTAGAGTTATCTTAAGGGAAGTCAATTCGGTTAAAATCGCCGTCATGCCTAAATAAGTGATTTTTTGGCCATTTTATAATAACCCACGACCATCACAAATCACGTTTTCAGGGAAGCCCGTGTCTTATTTTACCTacaataatgatttattttgacGACGTCGCCCTAGGTGTAGACGTTATAGGCTGCACGACAAACAGAGTTGTTGCACCTTTATATTTTTACACGACAGGCATTTACTCGCTCATCGTTGGTTGCCAAACAAAGAGAATAAtcagcttttttaaattaatgccaCTGCAGCCCGCCTTCAGCCAAATGACACGAAATATAGACGCTATAAAAACACATCGGCTTTTGTGTAATCTGACATAACGCCGACATCAGGTCGGGCATCGGATACGTACGGAACCTTTCCAGTTCGTGCTTTTCTGCATGCACGTCCGTGTCGCCGACAGGCTTTCCAGAAGAAAACGCAAACGCACTGCACAAAACACGAAGCGGCGGCGGACACGCGCTCGGCGCTGGAATCCCAACACGTAGTTATCCTTATATGGTCACTTTCCTGTTTGACAGTGTTACGTCACCGCGTGACGCGTGAGCAGGTGCAGACGCCCGGACTCGAGGGGTCAGGAGATAGACGTTAAACATCCATTTAATTACGTGCAACTTTCACAAAATATGCAATCGCGTATAAAGttagttttctctttgtttctgtctttctccCGCTGCCTCATGTTCCTGCTGCAGCCGAATTACACAGCACGACAGCAGAATATATCGTCAGAATATCAGAGTATAGTGTGGGATATTTAGGTGAGCATCGGTTCGCACGACGCGATCACCGTCATACGCATAAGTCACGCATTATTCATAAGGACGTTATGCATATCGGGGTCCATCAgaattttatgaatgaatatGTGGCACGCACCACATTTCGTCCTGACAGGGGTTATCGATTCACATCGCGCACCTCTGCCACACCGACTTCTTTTTCACTCGACGCTTAATTTCGCTACGGCTTACACAGTAACGTGCGCGGCGGTGCTCAGAGAGCCGCGTTTCCCCCGCGCGTTCCGTGGAGGCGCTCCCCGCGCGCGCAATGGTACGGTCCGtttcattcataaaattcaGGCGCACTATAAATAGCCGCTCGCGGAGCTGAGTGTCACTGACCAGGTTTATAAACCTGGAGAGAGCGACTCCAACATCACGAAGCGAGGCGTCTGGGATCGAGTCAACAGTTCGTCCGTTGCGCGCTGGAGAAATGTTTCTGAGCAAAGCGAAGAAGACCGATCCTGACTCCTCGTGCTCTTTGCCTGGGAACACCGGCTCCAGCAAAGCCGCCGATGCCCCGATGGACAGCAGCGCACAGGGCTCGTTCGTCCCGACGGTCACCGCGATCTCCAGCACGCCGGACTTGCAGTGGATGGTCCAGCCGACCATCATCACCTCCGCGTCTCCGTCCCTGGGCAGAGCCGAAAGCGGCGAAGCGGCCAAGAGCAAAGCGGCTGGGGGAAAGGGGAAAAGCGCCGCCAGGAAGAGCAAGTGCGAGCAGCTCTCTccggaggaagaggagaagaagaggatCAGGAGAGAGAGGAATAAAATGGCTGCGGCGAAGTGTCGCAACAGACGGAGAGAACTCACCGACACCCTCCAGGCAGAAACAGACAAGCTCGAAGAGGACAAAGCCGCCCTTCAGGCTGAAATCGAGACCCTCCTGAAGGAAAAGGAGAGGCTGGAGTACGTCCTCGCCACTCACAAGCCTCTTTGCCAGCTGCCCGAGGAGCTGGACTGCCTGTTCCCAGAGTCTCCCCAGCCGCTCTCCGCTCCCGAAGCGGCCAGCAAACTCCCCGAGGACGGCCCGCAGGACTTGGACATCCCCACCGTACCGTCCACCGCCATTTCGGGCAACTCCAACATCCTCCTGTGCTCCAGCGCGGAGGTCAGCCTGTGCGACCTCGAGCCCTCCCTGGACGTCAAGGACGAGCTCCTCGACCGGATCTCGGCGGAAACGGCCCGCTCCGTCCCCGACATCGACCTGACCGGCTCGCTGGGCATCACAGACTGGGAAACCCTCTACAAGTCTGTGGCCAGTGATCTAGAACCTTTGAGCACGCCGGTGGTGAGCACATCCACACCCACCTGCAACAACTACCTGTCCGTATTCACCTTCGCCTGCCCAGAGCTGGACTCCCTAGCCGAGGGACTGGACGGCTGCAAGGGCGGCGTGACCAAAGCAGAAACTAGCGTCGACATCCTCAACTCTCCCACCCTTCTTGCCTTATAAATGCAAGCGTAGATGATGTAATGTCACGACGTTGTTCTTAATATCTATGGGATATGGCGGTGTTATGATGTCCAGATGTGTGATGTTGGTGTGAAGCCAGCTGTTCTGTGGCTGCATCCATGTAATGTGTGCGGGACGGGGTTTACTTTCTTCCAGAGACATTCGATGTAGCCCAAATACAAGAGCATGGATAATTATCTTACGAGCAGATATGAACTATGTTCTGGTTTGAAAAGCATGCACgagatatctatatataaatatatatatgtatatacagtggtggccaaaatgATCTGAATACTACTATTCTCACCAGCTAAAAAGTAATTGTAAGTCAGTCCATTCCAGTGAGATTCGAtcatcagtctgtctggaaGGACATGAAGAAACCGATCAAACAGACAGACTCCAAGACACCTCAAGAAGTTTTAGGCACTTGTGTAAAAAATGCTATGAAAAGAGGATGCCGCCAATGGATTTTCTTCTTAATTTGAATGAAGTTTGATCTGTTTCTTAATGTCATTCCAGACCGACTGGATAATGAAGAGATCAAATCTCTCGAAATCActaaaatctcactggattattacaattaatagcAAATGAATGCTTGTAAATGTATAGTAATATTTCCTGATGACACACTACAGCAGAAGATAGGCATAAATGACCGAGATAGAAAAAGCTCCTGACGTTTTAACCATTTTGTCCaccactgtatatattatatgtataaaaagcatatatagtatatatatatattatatgtatcaGTTCCATATTTGTTTGATCTGGTGCTATAAGTTCTGTGGAATTGACTGCGGTTTTGTGTTCGTTTTCTATGGCAATAGATTATCGACTCGTGTTGTGCTTTAATATACAGTCATCAGAGTTATCACATACCTCAGTGTCATCATTCGACTGTGTTTTCACATCGTTCTTAAATGTTTAGAGTTTTCCATGAAAACATCCAGTGCTATATCGATGGAGATGTATTTtatgataatttatttttctacattttaaatttgacttctttgtcaaatgaaaagaatgaaatgagCATTGattgctgaataaatattcacGATATACAGTCAC
>XM_043262437.1
cacagtctcgtgagaaaaaaacacacacacatatgtcaAAACTCTGTCACGACTCttcacaaattaattacatagtCTATTTTAGACtgaaaactgcatttatataatattttagtgcAAATAGCCTGCCTTGTTGGCAGTATAACTTAACTTTGGGCTCAGTCATCATCAGTTTCAGTGATGCAGAAGGTGAAACATATGGCGAATATTATTTCGATACGATCGATGTAGGCACGAATCTGTCTTCTGATGATATGTTTCtcccattttacattttaaatcgcATCATTAAAGCATTCATGTTCAATAAcaatgaaggaaataatcaaaacGTTGAAAATAAAGTACTGGGTAGGATAGGTGTAGAGAGGGCTTTAATTTCCCAATAAGGGCGTCAACCATGGCATCTATTTaatgatttgaattaaaaatgagttCTAATGAActtcaatactgaggtgcagataactGCCACTTGCCCTTAAATAATGCTGCGTTTTCGATTGGTGTTAATAGAATCCatagcatctatgctaataaaatattctgCTTTCACTTAGTGCAAACAGCCGCTGCCAGTATTTTACCTTAGTGTTCGAACTCCAATCGGATCACGGatcgcgaatcatttgattcagaacggACTTCAAAGCGCGTTTCATCGATCATTTCATTCGGGATTCATTCAGCTGAGGCAGGGATGCATAGAGCAGTGAATAACATGTAGAGTTATCTTAAGGGAAGTCAATTCGGTTAAAATCGCCGTCATGCCTAAATAAGTGATTTTTTGGCCATTTTATAATAACCCACGACCATCACAAATCACGTTTTCAGGGAAGCCCGTGTCTTATTTTACCTacaataatgatttattttgacGACGTCGCCCTAGGTGTAGACGTTATAGGCTGCACGACAAACAGAGTTGTTGCACCTTTATATTTTTACACGACAGGCATTTACTCGCTCATCGTTGGTTGCCAAACAAAGAGAATAAtcagcttttttaaattaatgccaCTGCAGCCCGCCTTCAGCCAAATGACACGAAATATAGACGCTATAAAAACACATCGGCTTTTGTGTAATCTGACATAACGCCGACATCAGGTCGGGCATCGGATACGTACGGAACCTTTCCAGTTCGTGCTTTTCTGCATGCACGTCCGTGTCGCCGACAGGCTTTCCAGAAGAAAACGCAAACGCACTGCACAAAACACGAAGCGGCGGCGGACACGCGCTCGGCGCTGGAATCCCAACACGTAGTTATCCTTATATGGTCACTTTCCTGTTTGACAGTGTTACGTCACCGCGTGACGCGTGAGCAGGTGCAGACGCCCGGACTCGAGGGGTCAGGAGATAGACGTTAAACATCCATTTAATTACGTGCAACTTTCACAAAATATGCAATCGCGTATAAAGttagttttctctttgtttctgtctttctccCGCTGCCTCATGTTCCTGCTGCAGCCGAATTACACAGCACGACAGCAGAATATATCGTCAGAATATCAGAGTATAGTGTGGGATATTTAGGTGAGCATCGGTTCGCACGACGCGATCACCGTCATACGCATAAGTCACGCATTATTCATAAGGACGTTATGCATATCGGGGTCCATCAgaattttatgaatgaatatGTGGCACGCACCACATTTCGTCCTGACAGGGGTTATCGATTCACATCGCGCACCTCTGCCACACCGACTTCTTTTTCACTCGACGCTTAATTTCGCTACGGCTTACACAGTAACGTGCGCGGCGGTGCTCAGAGAGCCGCGTTTCCCCCGCGCGTTCCGTGGAGGCGCTCCCCGCGCGCGCAATGGTACGGTCCGtttcattcataaaattcaGGCGCACTATAAATAGCCGCTCGCGGAGCTGAGTGTCACTGACCAGGTTTATAAACCTGGAGAGAGCGACTCCAACATCACGAAGCGAGGCGTCTGGGATCGAGTCAACAGTTCGTCCGTTGCGCGCTGGAGAAATGTTTCTGAGCAAAGCGAAGAAGACCGATCCTGACTCCTCGTGCTCTTTGCCTGGGAACACCGGCTCCAGCAAAGCCGCCGATGCCCCGATGGACAGCAGCGCACAGGGCTCGTTCGTCCCGACGGTCACCGCGATCTCCAGCACGCCGGACTTGCAGTGGATGGTCCAGCCGACCATCATCACCTCCGCGTCTCCGTCCCTGGGCAGAGCCGAAAGCGGCGAAGCGGCCAAGAGCAAAGCGGCTGGGGGAAAGGGGAAAAGCGCCGCCAGGAAGAGCAAGTGCGAGCAGGAAACAGACAAGCTCGAAGAGGACAAAGCCGCCCTTCAGGCTGAAATCGAGACCCTCCTGAAGGAAAAGGAGAGGCTGGAGTACGTCCTCGCCACTCACAAGCCTCTTTGCCAGCTGCCCGAGGAGCTGGACTGCCTGTTCCCAGAGTCTCCCCAGCCGCTCTCCGCTCCCGAAGCGGCCAGCAAACTCCCCGAGGACGGCCCGCAGGACTTGGACATCCCCACCGTACCGTCCACCGCCATTTCGGGCAACTCCAACATCCTCCTGTGCTCCAGCGCGGAGGTCAGCCTGTGCGACCTCGAGCCCTCCCTGGACGTCAAGGACGAGCTCCTCGACCGGATCTCGGCGGAAACGGCCCGCTCCGTCCCCGACATCGACCTGACCGGCTCGCTGGGCATCACAGACTGGGAAACCCTCTACAAGTCTGTGGCCAGTGATCTAGAACCTTTGAGCACGCCGGTGGTGAGCACATCCACACCCACCTGCAACAACTACCTGTCCGTATTCACCTTCGCCTGCCCAGAGCTGGACTCCCTAGCCGAGGGACTGGACGGCTGCAAGGGCGGCGTGACCAAAGCAGAAACTAGCGTCGACATCCTCAACTCTCCCACCCTTCTTGCCTTATAAATGCAAGCGTAGATGATGTAATGTCACGACGTTGTTCTTAATATCTATGGGATATGGCGGTGTTATGATGTCCAGATGTGTGATGTTGGTGTGAAGCCAGCTGTTCTGTGGCTGCATCCATGTAATGTGTGCGGGACGGGGTTTACTTTCTTCCAGAGACATTCGATGTAGCCCAAATACAAGAGCATGGATAATTATCTTACGAGCAGATATGAACTATGTTCTGGTTTGAAAAGCATGCACgagatatctatatataaatatatatatgtatatacagtggtggccaaaatgATCTGAATACTACTATTCTCACCAGCTAAAAAGTAATTGTAAGTCAGTCCATTCCAGTGAGATTCGAtcatcagtctgtctggaaGGACATGAAGAAACCGATCAAACAGACAGACTCCAAGACACCTCAAGAAGTTTTAGGCACTTGTGTAAAAAATGCTATGAAAAGAGGATGCCGCCAATGGATTTTCTTCTTAATTTGAATGAAGTTTGATCTGTTTCTTAATGTCATTCCAGACCGACTGGATAATGAAGAGATCAAATCTCTCGAAATCActaaaatctcactggattattacaattaatagcAAATGAATGCTTGTAAATGTATAGTAATATTTCCTGATGACACACTACAGCAGAAGATAGGCATAAATGACCGAGATAGAAAAAGCTCCTGACGTTTTAACCATTTTGTCCaccactgtatatattatatgtataaaaagcatatatagtatatatatatattatatgtatcaGTTCCATATTTGTTTGATCTGGTGCTATAAGTTCTGTGGAATTGACTGCGGTTTTGTGTTCGTTTTCTATGGCAATAGATTATCGACTCGTGTTGTGCTTTAATATACAGTCATCAGAGTTATCACATACCTCAGTGTCATCATTCGACTGTGTTTTCACATCGTTCTTAAATGTTTAGAGTTTTCCATGAAAACATCCAGTGCTATATCGATGGAGATGTATTTtatgataatttatttttctacattttaaatttgacttctttgtcaaatgaaaagaatgaaatgagCATTGattgctgaataaatattcacGATATACAGTCAC

Function

symbol description
fosaa Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within regulation of transcription, DNA-templated. Predicted to be active in nucleus. Orthologous to human FOS (Fos proto-oncogene, AP-1 transcription factor subunit).
fos Enables several functions, including R-SMAD binding activity; RNA polymerase II core promoter sequence-specific DNA binding activity; and identical protein binding activity. Involved in several processes, including cellular response to cadmium ion; cellular response to reactive oxygen species; and transmembrane receptor protein serine/threonine kinase signaling pathway. Located in nucleoplasm. Part of protein-DNA complex and transcription factor AP-1 complex. Biomarker of Pick's disease; autosomal dominant polycystic kidney disease; cervical squamous cell carcinoma; colorectal adenocarcinoma; and intestinal benign neoplasm (multiple).

NR:

description
proto-oncogene c-Fos-like isoform X1

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG:

id description
K09031 FOSLN; fos-like antigen, invertebrate

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043262436.1 True 4110 mRNA 0.46 4 17952048 17958579
XM_043262437.1 False 4018 mRNA 0.46 3 17952048 17958595

Neighbor

gene id symbol gene type direction distance location
jdp2a jdp2,jdp2a,LOC107701522,LOC107589793,LOC107702236 coding downstream 2810 17939741 ~ 17949238 (-)
flvcr2a flvcr2,flvcr2a,LOC107702238,LOC107589770,LOC106591116 coding downstream 15824 17916202 ~ 17936224 (-)
ttll5 ttll5 coding downstream 41018 17833322 ~ 17911030 (-)
LOC122361798 ift43,LOC107723274 coding downstream 143891 17792213 ~ 17808157 (-)
esrrb esrrb,LOC107678144 coding downstream 261233 17637590 ~ 17690815 (-)
LOC122361452 gjd2,LOC107752716,LOC107565221,LOC107687856 coding upstream 312276 18270871 ~ 18276126 (-)
aqr aqr coding upstream 323481 18282076 ~ 18311121 (-)
paplna papln,paplna coding upstream 355086 18313681 ~ 18341936 (-)
psen1 psen1,LOC107684238,LOC107753355,LOC107687832,LOC107723284 coding upstream 388830 18347425 ~ 18355107 (-)
trappc12 trappc12,LOC107684236,LOC107687835,LOC107753354,LOC107723257,LOC107589762 coding upstream 415395 18373990 ~ 18389654 (-)
G121905 tgfb3,LOC107688075,LOC107723269 non-coding downstream 141647 17790942 ~ 17810401 (-)
G121854 NA non-coding downstream 331377 17620220 ~ 17620671 (-)
G121799 NA non-coding downstream 349749 17353412 ~ 17602299 (-)
G121852 NA non-coding downstream 368459 17582903 ~ 17583589 (-)
G121734 NA non-coding downstream 736770 17215055 ~ 17215278 (-)
G121965 NA non-coding upstream 46679 18005274 ~ 18005603 (-)
G121980 NA non-coding upstream 112267 18070862 ~ 18132726 (-)
G122002 fermt2,LOC107565223,LOC107589764 non-coding upstream 177744 18136339 ~ 18148376 (-)
G121987 NA non-coding upstream 208162 18166757 ~ 18171026 (-)
G121986 NA non-coding upstream 215122 18173717 ~ 18212416 (-)
LOC122362005 crim1,LOC107582940,LOC107679775,LOC107662656 other downstream 2000610 15829484 ~ 15951438 (-)
LOC122362003 LOC107664362,LOC107560152,LOC107752022,LOC107658150 other downstream 2185033 15760343 ~ 15767015 (-)
G121456 LOC107660450 other downstream 2211562 15738262 ~ 15740486 (-)
G121438 LOC107708961,LOC107664629,LOC107654010,LOC107719547 other downstream 2262254 15688891 ~ 15689794 (-)
LOC122361708 LOC107598628,LOC107708961,LOC107654010,LOC107719547,LOC107664629,LOC107557341 other downstream 2263608 15683661 ~ 15688440 (-)
acyp1 acyp1 other upstream 3694 17962289 ~ 17963981 (-)
LOC122361562 otofb,LOC107752720,LOC107701524,LOC107723281,LOC108423539 other upstream 23456 17982051 ~ 18004214 (-)
LOC122361613 NA other upstream 320863 18279458 ~ 18281572 (-)
LOC122361943 NA other upstream 672662 18631257 ~ 18644992 (-)
G122247 NA other upstream 828287 18786882 ~ 18790880 (-)

Expression


Co-expression Network