ptgr2 (ptgr2)


Basic Information

Item Value
gene id ptgr2
gene name ptgr2
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056715.1
NCBI id CM032084.1
chromosome length 22256391
location 15010826 ~ 15026415 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043262801.1
GAGCCAATCAGACGAGCTCCTGCGAGTCATGTGATTATTTCAGGAAGAAACGCAGTCTCCGctaacaacattttcattgcGTTGGAAGTAACTGCAAGTTTTCTGATAAAAACGTCAAGTAGTAAAAGAAgggaaaaatgttaaatgtaaaaagggTTGTGTTGTGCTCTAGACCAGGCAAAAATGGTCATCCTGTCCCAGAGAATTTCCGCGTAGAGGAGATCATGAAATCCCCCGAGCTGAAAGAAGGACAAGTGTTAGTCCGCACACTCTTCCTCTCAGTTGACCCTTACATGCGCTGTCGCATGAACGATGATACTGGAGCTGACTACCTGTTGCCATGGAGATTAGAGGAGTGTGTGGATGGAGGTGGAGTTGGTGTAGTGGAGGCCAGCGAGAGTCAGGCATTATCTGCGGGCACTGCCGTCACCTCCTTCAACTGGCCTTGGCAAACCTACGATGTGATGGATGGCAGCCTTTTGCAGAAGGTCGAGCCCGAGATGGTGGATGGTCACCTGTCGTATGTTCTGGGGGCGGTGGGCATGCCTGGCCTCACCGCTCTTTTGGGTGTGAGAGAGAAGGGTCACGTGACTCCAGGAAGACACCAGACGATGGTCATCAGTGGAGCAGCCGGAGCTTGCGGCTCGATTGCCGGACAGATCGGCAGGTTGGATGGTTGTGAGAGAGTCGTGGGGATCTGTGGCTCCGACCAGAAGTGCCAGGCCTTGGTAACAGAGCTGGGTTTTACAGCCGGGATAAACTACAGACAAGGAGATATCAGCTCAGCGCTGAGGGAGCACTGCCCCACGGGCATCGATATATACTTTGACAACGTAGGCGGTCCCATCAGCGACGCTGTTATATCACAGATGAATCCCGCTGGTCATGTGATCCTGTGCGGCCAGATATCGCAGTACAATAAGGATGTGCCTTACCCACCTCCTCTTAGTGAGGAGACCCAAGAAGCTTTGCATCGCAAAAACATCACAAGAGAGAGATTTGTCGTGTTGAACTACACGGAGAAGCACGAGGAAGGTCTTATGCAGCTCAGCCGCTGGGTAAAGACTGGCCAGATAAAAGTGTTGGAAACTGTCGTAAATGGTATAGAAAACATGGGAGAGGCGTTCTGCTCCATGATGACCGGAGGCAATGTCGGTAAACAAGTTGTCAAAATTTCAGACTGAGTCAAGCATCTGCTTCTGGAAGCCTTGTGGAGGTGGTGCAGTCATTAGAAATCTGGGCTGCTAACCGAAAGGTTGCTAAAAGACAGCTGAGGTTTCTCCAGTgggactgtccctttaagcgtGCCGTACGTCTATGTGAATAAAGGCATCAACTTAGTTGacctaacatttttaaaatagaattaaaggGAATAGTTCCactaaaaatttacattttgtcatcatttactcatgtcCATTTactatgtgtttttatgttaaacataaaagaagatatttggaaaatattggtaatcaaacagtttttgctttccattgacttccatagcatttCTTTCCCCTCTataagtcaatggggaccaatTTGGTTCTTCAAAAGATGAAGGACATGAgggtaaattat
>XR_006253025.1
GAGCCAATCAGACGAGCTCCTGCGAGTCATGTGATTATTTCAGGAAGAAACGCAGTCTCCGctaacaacattttcattgcGTTGGAAGTAACTGCAAGTTTTCTGATAAAAACGTCAAGTAGTAAAAGAAgggaaaaatgttaaatgtaaaaagggTTGTGTTGTGCTCTAGACCAGGCAAAAATGGTCATCCTGTCCCAGAGAATTTCCGCGTAGAGGAGATCATGAAATCCCCCGAGCTGAAAGAAGGACAAGTGTTAGTCCGCACACTCTTCCTCTCAGTTGACCCTTACATGCGCTGTCGCATGAACGATGATACTGGAGCTGACTACCTGTTGCCATGGAGATTAGAGGAGTGTGTGGATGGAGGTGGAGTTGGTGTAGTGGAGGCCAGCGAGAGTCAGGCATTATCTGCGGGCACTGCCGTCACCTCCTTCAACTGGCCTTGGCAAACCTACGATGTGATGGATGGCAGCCTTTTGCAGAAGGTCGAGCCCGAGATGGTGGATGGTCACCTGTCGTATGTTCTGGGGGCGGTGGGCATGCCTGGCCTCACCGCTCTTTTGGGTGTGAGAGAGAAGGGTCACGTGACTCCAGGAAGACACCAGACGATGGTCATCAGTGGAGCAGCCGGAGCTTGCGGCTCGATTGCCGGACAGATCGGCAGGTTGGATGGTTGTGAGAGAGTCGTGGGGATCTGTGGCTCCGACCAGAAGTGCCAGGCCTTGGTAACAGAGCTGGGTTTTACAGCCGGGATAAACTACAGACAAGGAGATATCAGCTCAGCGCTGAGGGAGCACTGCCCCACGGGCATCGATATATACTTTGACAACGTAGGCGGTCCCATCAGCGACGCTGTTATATCACAGATGAATCCCGCTGGTCATGTGATCCTGTGCGGCCAGATATCGCAGTACAATAAGGATGTGCCTTACCCACCTCCTCTTAGTGAGGAGACCCAAGAAGCTTTGCATCGCAAAAACATCACAAGAGAGAGATTTGTCGTGTTGAACTACACGGAGAAGCACGAGGAAGGTCTTATGCAGCTCAGCCGCTGGGTAAAGACTGGCCAGATAAAAGTGTTGGAAACTGTCGTAAATGGTATAGAAAACATGGGAGAGGCGTTCTGCTCCATGATGACCGGAGGCAATGTCGGTAAACAAGTTGTCAAAATTTCAGACTGAGTCAAGCATCTGCTTCTGGAAGCCTTGTGGAGGTGGTGCAGTCATTAGAAATCTGGGCTGCTAACCGAAAGGTTGCTAAAAGACAGCTGAGGTTTCTCCAGTgggactgtccctttaagcgtGCCGTACGTCTATGTGAATAAAGGCATCAACTTAGTTGacctaacatttttaaaata

Function

symbol description
ptgr2 Predicted to enable 15-oxoprostaglandin 13-oxidase activity. Predicted to be involved in prostaglandin metabolic process. Predicted to be located in cytoplasm. Is expressed in nervous system; optic vesicle; proneural cluster; and somite. Orthologous to human PTGR2 (prostaglandin reductase 2).

NR:

description
prostaglandin reductase 2 isoform X2

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K13949 PTGR2, ZADH1; prostaglandin reductase 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043262801.1 True 1587 mRNA 0.47 9 15023470 15026415
XR_006253025.1 False 1363 transcript 0.50 10 15010826 15026415

Neighbor

gene id symbol gene type direction distance location
kif3cb kif3cb,LOC107594701,LOC107679774,LOC107752740,LOC107741850,LOC107600866,LOC107666256 coding downstream 16311 14989660 ~ 14994515 (-)
asxl2 asxl2,LOC107679772,LOC107666255 coding downstream 22892 14970900 ~ 14987934 (-)
dtnbb LOC107600868,LOC107741848,LOC108425647 coding downstream 41599 14927166 ~ 14969227 (-)
dnmt3ab LOC107679796,LOC107752744,LOC107600869 coding downstream 86333 14881454 ~ 14924493 (-)
dpysl5a dpysl5a,dpysl5,LOC107741845,LOC107666251,LOC107752745,LOC107679787,LOC107594693 coding downstream 134302 14861336 ~ 14876524 (-)
zfp36l1a zfp36l1a,LOC107752727,LOC107577075,LOC107679798,LOC107666263,LOC107600858,LOC107741857 coding upstream 186457 15212872 ~ 15218170 (-)
rps6ka5 rps6ka5,LOC107582903,LOC107730213,LOC107741860,LOC107679795,LOC107600856,LOC107666260 coding upstream 456696 15483111 ~ 15505931 (-)
LOC122361840 c17h14orf159,LOC107730207,LOC107679776 coding upstream 823050 15849465 ~ 15858684 (-)
slc24a4a slc24a4a,LOC107679778,LOC107730209,LOC107662654,LOC107602265,LOC107582941 coding upstream 832309 15858724 ~ 15890289 (-)
LOC122362058 crim1,LOC107679775,LOC107662656,LOC107582940 coding upstream 926167 15952582 ~ 16000711 (-)
G121123 NA non-coding downstream 218758 14790929 ~ 14792068 (-)
G121096 LOC107752749,LOC107594711,LOC107666252 non-coding downstream 233717 14776886 ~ 14777109 (-)
LOC122361512 NA non-coding downstream 429958 14462125 ~ 14580868 (-)
G121069 NA non-coding downstream 554037 14451623 ~ 14456789 (-)
G121051 NA non-coding downstream 618784 14391384 ~ 14392042 (-)
G121214 NA non-coding upstream 13308 15039723 ~ 15045366 (-)
LOC122361632 NA non-coding upstream 175281 15201696 ~ 15210544 (-)
G121269 NA non-coding upstream 247668 15274083 ~ 15274615 (-)
G121301 NA non-coding upstream 286150 15312565 ~ 15313252 (-)
G121320 NA non-coding upstream 368590 15395005 ~ 15395362 (-)
myo6b myo6b,LOC107741840,LOC107594692,LOC107679792,LOC107600844,LOC107666253 other downstream 171013 14792186 ~ 14839813 (-)
LOC122361652 LOC107679745,LOC107752800,LOC107594718 other downstream 277249 14709491 ~ 14733577 (-)
kidins220a id2a,id2,kidins220,LOC107579075,LOC107707685,LOC107553286,LOC107655320,LOC107752760 other downstream 970615 13981547 ~ 14040211 (-)
LOC122361883 LOC107592775,LOC107752809,LOC100537549,LOC108433935,LOC107733136,LOC107674087 other downstream 1810134 13193177 ~ 13200692 (-)
G120660 LOC107752798,LOC107592762,LOC107697764,LOC107733171 other downstream 2190158 12817192 ~ 12820668 (-)
crip1 crip1,LOC106611282,LOC107679815,LOC107594706,LOC107600860 other upstream 33578 15059993 ~ 15064678 (-)
crip2 crip2,LOC107594708,LOC107752734,LOC107679813,LOC107666262,LOC107741856,LOC107600859 other upstream 57403 15083818 ~ 15099957 (-)
pax9 pax9,LOC107679748,LOC107666242,LOC107741874 other upstream 371373 15397788 ~ 15406503 (-)
LOC122361708 LOC107598628,LOC107708961,LOC107654010,LOC107719547,LOC107664629,LOC107557341 other upstream 657246 15683661 ~ 15688440 (-)
G121438 LOC107708961,LOC107664629,LOC107654010,LOC107719547 other upstream 662476 15688891 ~ 15689794 (-)

Expression


Co-expression Network