LOC122361864 (fut8a,LOC107674109,LOC107752771,LOC107592788,LOC107553275)


Basic Information

Item Value
gene id LOC122361864
gene name fut8a,LOC107674109,LOC107752771,LOC107592788,LOC107553275
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056715.1
NCBI id CM032084.1
chromosome length 22256391
location 13626625 ~ 13631998 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043262947.1
AGCTTTATTGATTTGATAATTGTAAATTAATCTCATACTGGAAAAAACATGTTTGGCCAATTTACAGTCCATACCACAGTATTTAAGTTCTCCAGTGCATTCCTTAATTTTTTCTGCCTATTGTCTTGTGCATTGTCTGTAGGTGAAGCAAACGATCGGGATGTTCAGGTCATTGAGTTGCCCATCGTGGACAGCCTGCACCCCGGTCCCCCGTACCTGCCCCTGGCCATCCCTGAAGACCTTGCGGACAGGCTTCAGAGGCTTCATGGAGACCCACCTGTGTGGTGGGTCTCTCAGTTTGTCAAGTACCTGATCCGCCCCCAGGCTTGGCTGTTGAAGGAAATGCAAGAGGCCACCGCCAAGCTGGGCTTCAAGCACCCCATTATAGGGGTGCATGTGCGCCGTACAGATAAGGTAGGGACGGAGGCGGCATTCCACCCCATAGAAGAGTACATGGTGCATGTTGAGGACCACTACCAGAGTCTGGCCCAGCGCATGCATGTGGATAAGAAACGGGTTTACCTTGCCACTGACGACCCTTCTCTACTGCAGGAGGCCAAGTCTAAGTATCCTGATTATGAATTTATTAGTGATAATTCTATTTCATGGTCGGCTGGGCTGCACAACCGTTACACTGAAAACTCTCTGAGAGGAGTCATCCTGGATATCCACTTCCTCTCCAGGACCAACTTTTTAGTGTGCACATTCTCTTCACAGGTGTGTCGAGTGGCCTACGAGATCATGCAGACTCTCCACCCAGACGCCTCATCCTTCTTCTATTCCCTCGATGACATCTACTACTTCGGTGGGCAGAACGCCCACAACCAGATCGCTATCTACCCGCACCAAGCACGCAATAGCGACGACATTCCGCTTGAGCCGGGAGATGTGATCGGCGTTGCGGGCAACCATTGGGATGGAAACTCCAAGGGAATCAACCGCAAAACGGGCCGCACCGGCCTCTACCCCTCTTATAAAGTCAAAGAGAAGATTGAGACAGTGAAGTATCCCACGTACCCAGAAGCGGACAAACTTCTTAAGAAGCCGTAGATTGAGACAAGGACAGCGCAGATACTCTTGTTTATGAAATGAGGAAACCCTGGACCACCTGGATGGGGAATGCacttgtgtgtgagtgtgtatgaatgtgtttgtgtaggtgtgtctgtgtgtgtgtgttgtctagGGGTTCTTCGCAGGGTTTTGGAACACCTTCCTAACTCTGGTGCTTGGACTTTTGAGTCTCCCTGAAATGGCAATCAGGGTCGtggaagacaaaaaaacaaagaggtTGAACTCAAGGCAACAGAAACGGAAGGCACTGTACTGTAGGTACTTTCTAATTAATCTCCGGGTAATGAAGGGAACTGAATATGTTAATTTAAGAACAGAACTGGAAGAAGTGACTTTGCAACTCTGAACCGATCATGACAAAGGAATCATAAACCCGGGTTACTCTCGTCCTCCTATGCTCTTATACCTCCTTGTGCACAATGATGGCATCCTTTACTCTAGCCTCACTCAACTCGTTTCTGTCATGCCATCACTACGCCAACTGACACTCCTCTTCACACCCATGAGCTATTAATTTCCACTGCCATACTGTGCTTTTAAATGTGActtatgctgtttttattttcattgtaagGTTtatcatgtgtttgtgtgagtgtgtgtgtgtgagcgtgtgtgtgtgaggattgGAAAACGGTGCCTATCAGGGCGATTGACTCACTTTTACGGGACGAGTTTTGACTCTGGAGCCTTACGGACCAGCCTTTCCACGCAGATTTACACTCCTTCCCCTCCTTTCCACTTAGTGTCTTATCCACAGCCATTTGTCCATCATGTTTTTTAAGAGATCATTTCatgttattacattaaaaaaaacaaaacagataagAAAATGTCACTTAATATGAAGATAATgatactaatattattaatgaggatgatgatgataagaGAAAGAATAATTATGGTAACAATGACACTTGCTGTCATTATAAATTTTAGTTAATCATGAAGgagttgttcattgttttatgtttgcGGGCATTGTCTCTTTGGTAAGCAGATCAAATAAACTTGATCAGCCAA

Function

symbol description
fut8a Enables alpha-(1->6)-fucosyltransferase activity. Acts upstream of or within N-glycan fucosylation. Predicted to be located in Golgi cisterna membrane. Predicted to be integral component of membrane. Orthologous to human FUT8 (fucosyltransferase 8).

NR:

description
PREDICTED: alpha-(1,6)-fucosyltransferase-like

GO:

id name namespace
GO:0036071 N-glycan fucosylation biological_process
GO:0033578 protein glycosylation in Golgi biological_process
GO:0032580 Golgi cisterna membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0008424 glycoprotein 6-alpha-L-fucosyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043262947.1 True 2100 mRNA 0.45 4 13626625 13631998

Neighbor

gene id symbol gene type direction distance location
dnal1 dnal1 coding downstream 227259 13396400 ~ 13399366 (-)
tedc1 LOC107752774,LOC107697787,LOC107592785,LOC107733103,LOC107594770,LOC107674045 coding downstream 231006 13384540 ~ 13395619 (-)
tmem121aa tmem121a,tmem121,LOC107594772,LOC107674105,LOC107592808,LOC107697696 coding downstream 281034 13318411 ~ 13345591 (-)
ccdc28a ccdc28a,LOC107752777,LOC107697785,LOC107592783,LOC107733152,LOC107594775 coding downstream 342930 13278776 ~ 13283695 (-)
LOC122361854 ect2l,LOC107592784,LOC107752807 coding downstream 347954 13270357 ~ 13278671 (-)
mboat2a mboat2,mboat2a,LOC107553282,LOC107752759,LOC107655319,LOC107707682 coding upstream 408355 14040353 ~ 14083941 (-)
itgb1bp1 itgb1bp1,LOC107655317,LOC107707691,LOC107679818,LOC107752756 coding upstream 510946 14142944 ~ 14147213 (-)
adam17a adam17,adam17a,LOC107752755,LOC107655315,LOC107707689,LOC107563905 coding upstream 528521 14160519 ~ 14171694 (-)
rnf144aa rnf144aa,rnf144a,LOC107752753,LOC107655314,LOC107553279 coding upstream 541273 14173271 ~ 14204581 (-)
rsad2 rsad2,LOC107752752,LOC107553276,LOC107707684,LOC107655310 coding upstream 574782 14206780 ~ 14209877 (-)
G120871 NA non-coding downstream 330089 13296270 ~ 13296536 (-)
G120835 NA non-coding downstream 339338 13217727 ~ 13287287 (-)
G120865 LOC107752772,LOC107697781,LOC107733167,LOC107592781,LOC107674095,LOC107594780 non-coding downstream 357253 13268577 ~ 13269372 (-)
G120833 NA non-coding downstream 443176 13180074 ~ 13183449 (-)
G120843 NA non-coding downstream 452434 13173948 ~ 13174191 (-)
G120929 NA non-coding upstream 145727 13777725 ~ 13815014 (-)
G120980 NA non-coding upstream 301422 13933420 ~ 13933685 (-)
G120982 NA non-coding upstream 331595 13963593 ~ 13963870 (-)
G120983 NA non-coding upstream 343749 13975747 ~ 13976226 (-)
G120989 NA non-coding upstream 456642 14088640 ~ 14088875 (-)
LOC122361883 LOC107592775,LOC107752809,LOC100537549,LOC108433935,LOC107733136,LOC107674087 other downstream 425933 13193177 ~ 13200692 (-)
G120660 LOC107752798,LOC107592762,LOC107697764,LOC107733171 other downstream 805957 12817192 ~ 12820668 (-)
LOC122361973 LOC107592804,LOC107697765,LOC107752799,LOC107674033,LOC107733077 other downstream 834756 12663239 ~ 12791869 (-)
lin52 lin52,LOC107594798 other downstream 1235077 12381281 ~ 12391548 (-)
evla evla,LOC107719466,LOC107697733,LOC107563375,LOC107594809,LOC107733132,LOC108425620 other downstream 1681897 11915468 ~ 11944728 (-)
kidins220a id2a,id2,kidins220,LOC107579075,LOC107707685,LOC107553286,LOC107655320,LOC107752760 other upstream 349549 13981547 ~ 14040211 (-)
LOC122361652 LOC107679745,LOC107752800,LOC107594718 other upstream 1077493 14709491 ~ 14733577 (-)
myo6b myo6b,LOC107741840,LOC107594692,LOC107679792,LOC107600844,LOC107666253 other upstream 1160188 14792186 ~ 14839813 (-)
ptgr2 ptgr2 other upstream 1378828 15010826 ~ 15026415 (-)
crip1 crip1,LOC106611282,LOC107679815,LOC107594706,LOC107600860 other upstream 1427995 15059993 ~ 15064678 (-)

Expression


Co-expression Network