dnal1 (dnal1)


Basic Information

Item Value
gene id dnal1
gene name dnal1
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056715.1
NCBI id CM032084.1
chromosome length 22256391
location 13396400 ~ 13399366 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043262960.1
CCCAtctttatttctgcttttaataCCCGTTATCGTGCTATGTTGCAGATGTTAAAATGCGCTGATGAAAATCGGGAGAtgagttgtttgttttataataaaacgaGGCCATTACGCTGGCTGAGAACAGAAGCTGCATCCGTGCCCATCACTTGTGTCAGGCAGCTGGCGGCAGATAAACATTTAGCCACCTCGCTAGCTTTTAGACAATAACAAATGAGGTTTTAAATGTCCAGAGGTTTGGTTTCATCACGTATTAAACAGGCTACACACAGGCTACAGAAGATGTCAGCGTCGAGAGGATAGCAAGCTTAGCACGATAAGTTAATGTTGAAGCGGGTGATTTTACTAACATACAGCGGCATGTTCGTAAAGCTATAGAAAAATGcgttttaatatacatattgtaCATGCAAGCATCGTCTTACCTTTCTGTGAGTCGTCACGATTGTATAACGTGTGTTTTCAGGCAAAAGCAACAACTATTAAAGAGGCTCTGGTGAAATGGGAGGAGAAAACGGGGGAAAAGGCGAGCGAGGCAACAGCAGTAAAGCTTTATGGTCAGATTCCTCCCATCGAAAAAATGGACGCGTCCCTCTCTAATCTTGTCAACTGCGAGAGATTATCCTTGTCTACAAACTGCATTGAAAAAATTGCCAACCTGAATGGTCTAAAAAACCTTAAGATATTATCCTTGGGGCGAAATAACATCAAAAACCTAAATGGACTTGAGGCAGTGGGTGATACTCTGGAGGAGCTGTGGATCTCTTATAACCTCATAGAAAAACTGAAGGGAATTCACGTCATGAAGAAGCTCAAAGTCTTGTACATGTCTAACAACTTGGTCAAGGAGTGGGGGGAGTTTCAGAAGCTGGCCGATCTTCCAGCATTGGCGGACCTCGTATTCGTGGGGAACCCACTAGAAGAAAAGTATTCTGCTGATGGCAACTGGATAGAGGAAGCTACTAAGAGGCTTCCAAAGCTTAAAAAGCTAGACGgaaaCCCCGTTATCAAACGAGAAGAGGAGGAAGGTGAAGGGGAGAGCTAATGCCGTTTCTTTGACTATTCTGAAGTtggtgcatttttattgttcaaaCACACCAGCATTTTAACTGTTAGACGTCTGtgcaatatttgcattttttaattaggtTTATTTATATGGAACGAAGCTAAAAAGCTAAATCCACTTGTTGAGCTTTAACACTGTTCGAGCAGATCTGAAAAGCACACGCTCGATGCGTTTTGTTAGCCTTAGCACAAGCAGTGGCATACAATCATAATTCAAGGGCCGTGCAGATGATGACAATAATTCTCTAGGCTGTCAAGAAATCCATCGTTACCTTAAAGAACTATTTCTATTTAATCTAACCtgtgcttaaaaataataagaagtTATATGCACACCTTTATAATATGGAATGATTTAACATAACTTTCATtcaattcagtaaaaaaataataactgactTGTACATCCACATGAAGGATATATTAAAAGTTAAGAAAGTTAATAACAAAACTTTTCAGGGAGATCAATAATATGTTACATTATACCAGTGAATATAAGCCAGTGACGCTTAAACACACTGGAATGATTGATGAAGTGTGTGGCATAGACATATAACTGTTTCAATTGGTGGTGCTATACTTTAAAAATTCTGAACTTGATTAATAACTGCAAGATTGACGTTTGTAATTCAGTTTGAATGAAACGCCTTTTGTAAATGGCACGgtcttttgtaatatatttggACATAAGCAAAAATCTATTTGCAGTTATTAGTATAGTTCCATCACTAAGTGTGTTGTTGAGCTGCACAATGAAAGCCTTTTAAGACTTTGTAGCATGTCTCCATAGAGTTACTAATACTGCAATTAAAACATTGTCTGAATTAGTTTCCTATCAACAATTTTGTAAACGTGACTTCGGTTTTATATTTACAAGTTTAcgcatgttttattgtttttgatccctctacatgtttttgtttactgtgtttcagaaggaaaaaataaactatttttgtcCTCTGCTCAA
>XM_043262961.1
CACGCGGATACGCGGCTCGCGCCACTCGGAAGCAACGCTTCGCGCACGCGCTTTGAGTCCGGGCAGTTCCATAGCAACCGTAAAGAACAACATGGCAAAAGCAACAACTATTAAAGAGGCTCTGGTGAAATGGGAGGAGAAAACGGGGGAAAAGGCGAGCGAGGCAACAGCAGTAAAGCTTTATGGTCAGATTCCTCCCATCGAAAAAATGGACGCGTCCCTCTCTAATCTTGTCAACTGCGAGAGATTATCCTTGTCTACAAACTGCATTGAAAAAATTGCCAACCTGAATGGTCTAAAAAACCTTAAGATATTATCCTTGGGGCGAAATAACATCAAAAACCTAAATGGACTTGAGGCAGTGGGTGATACTCTGGAGGAGCTGTGGATCTCTTATAACCTCATAGAAAAACTGAAGGGAATTCACGTCATGAAGAAGCTCAAAGTCTTGTACATGTCTAACAACTTGGTCAAGGAGTGGGGGGAGTTTCAGAAGCTGGCCGATCTTCCAGCATTGGCGGACCTCGTATTCGTGGGGAACCCACTAGAAGAAAAGTATTCTGCTGATGGCAACTGGATAGAGGAAGCTACTAAGAGGCTTCCAAAGCTTAAAAAGCTAGACGgaaaCCCCGTTATCAAACGAGAAGAGGAGGAAGGTGAAGGGGAGAGCTAATGCCGTTTCTTTGACTATTCTGAAGTtggtgcatttttattgttcaaaCACACCAGCATTTTAACTGTTAGACGTCTGtgcaatatttgcattttttaattaggtTTATTTATATGGAACGAAGCTAAAAAGCTAAATCCACTTGTTGAGCTTTAACACTGTTCGAGCAGATCTGAAAAGCACACGCTCGATGCGTTTTGTTAGCCTTAGCACAAGCAGTGGCATACAATCATAATTCAAGGGCCGTGCAGATGATGACAATAATTCTCTAGGCTGTCAAGAAATCCATCGTTACCTTAAAGAACTATTTCTATTTAATCTAACCtgtgcttaaaaataataagaagtTATATGCACACCTTTATAATATGGAATGATTTAACATAACTTTCATtcaattcagtaaaaaaataataactgactTGTACATCCACATGAAGGATATATTAAAAGTTAAGAAAGTTAATAACAAAACTTTTCAGGGAGATCAATAATATGTTACATTATACCAGTGAATATAAGCCAGTGACGCTTAAACACACTGGAATGATTGATGAAGTGTGTGGCATAGACATATAACTGTTTCAATTGGTGGTGCTATACTTTAAAAATTCTGAACTTGATTAATAACTGCAAGATTGACGTTTGTAATTCAGTTTGAATGAAACGCCTTTTGTAAATGGCACGgtcttttgtaatatatttggACATAAGCAAAAATCTATTTGCAGTTATTAGTATAGTTCCATCACTAAGTGTGTTGTTGAGCTGCACAATGAAAGCCTTTTAAGACTTTGTAGCATGTCTCCATAGAGTTACTAATACTGCAATTAAAACATTGTCTGAATTAGTTTCCTATCAACAATTTTGTAAACGTGACTTCGGTTTTATATTTACAAGTTTAcgcatgttttattgtttttgatccctctacatgtttttgtttactgtgtttcagaaggaaaaaataaactatttttgtcCTCTGCTCAA
>XM_043262962.1
TCTCATGGCAACGCGATCTGTGATGTTTGTGCTGTCACGCGGATACGCGGCTCGCGCCACTCGGAAGCAACGCTTCGCGCACGCGCTTTGAGTCCGGGCAGTTCCATAGCAACCGTAAAGAACAACATGGAGGAGAAAACGGGGGAAAAGGCGAGCGAGGCAACAGCAGTAAAGCTTTATGGTCAGATTCCTCCCATCGAAAAAATGGACGCGTCCCTCTCTAATCTTGTCAACTGCGAGAGATTATCCTTGTCTACAAACTGCATTGAAAAAATTGCCAACCTGAATGGTCTAAAAAACCTTAAGATATTATCCTTGGGGCGAAATAACATCAAAAACCTAAATGGACTTGAGGCAGTGGGTGATACTCTGGAGGAGCTGTGGATCTCTTATAACCTCATAGAAAAACTGAAGGGAATTCACGTCATGAAGAAGCTCAAAGTCTTGTACATGTCTAACAACTTGGTCAAGGAGTGGGGGGAGTTTCAGAAGCTGGCCGATCTTCCAGCATTGGCGGACCTCGTATTCGTGGGGAACCCACTAGAAGAAAAGTATTCTGCTGATGGCAACTGGATAGAGGAAGCTACTAAGAGGCTTCCAAAGCTTAAAAAGCTAGACGgaaaCCCCGTTATCAAACGAGAAGAGGAGGAAGGTGAAGGGGAGAGCTAATGCCGTTTCTTTGACTATTCTGAAGTtggtgcatttttattgttcaaaCACACCAGCATTTTAACTGTTAGACGTCTGtgcaatatttgcattttttaattaggtTTATTTATATGGAACGAAGCTAAAAAGCTAAATCCACTTGTTGAGCTTTAACACTGTTCGAGCAGATCTGAAAAGCACACGCTCGATGCGTTTTGTTAGCCTTAGCACAAGCAGTGGCATACAATCATAATTCAAGGGCCGTGCAGATGATGACAATAATTCTCTAGGCTGTCAAGAAATCCATCGTTACCTTAAAGAACTATTTCTATTTAATCTAACCtgtgcttaaaaataataagaagtTATATGCACACCTTTATAATATGGAATGATTTAACATAACTTTCATtcaattcagtaaaaaaataataactgactTGTACATCCACATGAAGGATATATTAAAAGTTAAGAAAGTTAATAACAAAACTTTTCAGGGAGATCAATAATATGTTACATTATACCAGTGAATATAAGCCAGTGACGCTTAAACACACTGGAATGATTGATGAAGTGTGTGGCATAGACATATAACTGTTTCAATTGGTGGTGCTATACTTTAAAAATTCTGAACTTGATTAATAACTGCAAGATTGACGTTTGTAATTCAGTTTGAATGAAACGCCTTTTGTAAATGGCACGgtcttttgtaatatatttggACATAAGCAAAAATCTATTTGCAGTTATTAGTATAGTTCCATCACTAAGTGTGTTGTTGAGCTGCACAATGAAAGCCTTTTAAGACTTTGTAGCATGTCTCCATAGAGTTACTAATACTGCAATTAAAACATTGTCTGAATTAGTTTCCTATCAACAATTTTGTAAACGTGACTTCGGTTTTATATTTACAAGTTTAcgcatgttttattgtttttgatccctctacatgtttttgtttactgtgtttcagaaggaaaaaataaactatttttgtcCTCTGCTCAA

Function

symbol description
dnal1 Predicted to enable alpha-tubulin binding activity and dynein heavy chain binding activity. Predicted to be involved in outer dynein arm assembly. Predicted to be located in cell projection and microtubule. Predicted to be part of dynein complex. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in primary ciliary dyskinesia 16. Orthologous to human DNAL1 (dynein axonemal light chain 1).

NR:

description
dynein light chain 1, axonemal

GO: NA

KEGG:

id description
K10411 DNAL1; dynein light chain 1, axonemal

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043262960.1 True 2041 mRNA 0.38 7 13396400 13399230
XM_043262961.1 False 1666 mRNA 0.38 8 13396400 13399331
XM_043262962.1 False 1662 mRNA 0.38 7 13396400 13399366

Neighbor

gene id symbol gene type direction distance location
tedc1 LOC107752774,LOC107697787,LOC107592785,LOC107733103,LOC107594770,LOC107674045 coding downstream 781 13384540 ~ 13395619 (-)
tmem121aa tmem121a,tmem121,LOC107594772,LOC107674105,LOC107592808,LOC107697696 coding downstream 50809 13318411 ~ 13345591 (-)
ccdc28a ccdc28a,LOC107752777,LOC107697785,LOC107592783,LOC107733152,LOC107594775 coding downstream 112705 13278776 ~ 13283695 (-)
LOC122361854 ect2l,LOC107592784,LOC107752807 coding downstream 117729 13270357 ~ 13278671 (-)
efr3ba efr3ba,LOC107697777,LOC107592778,LOC107752767,LOC107733134 coding downstream 168663 13206002 ~ 13227737 (-)
LOC122361864 fut8a,LOC107674109,LOC107752771,LOC107592788,LOC107553275 coding upstream 227259 13626625 ~ 13631998 (-)
mboat2a mboat2,mboat2a,LOC107553282,LOC107752759,LOC107655319,LOC107707682 coding upstream 640987 14040353 ~ 14083941 (-)
itgb1bp1 itgb1bp1,LOC107655317,LOC107707691,LOC107679818,LOC107752756 coding upstream 743578 14142944 ~ 14147213 (-)
adam17a adam17,adam17a,LOC107752755,LOC107655315,LOC107707689,LOC107563905 coding upstream 761153 14160519 ~ 14171694 (-)
rnf144aa rnf144aa,rnf144a,LOC107752753,LOC107655314,LOC107553279 coding upstream 773905 14173271 ~ 14204581 (-)
G120871 NA non-coding downstream 99864 13296270 ~ 13296536 (-)
G120835 NA non-coding downstream 109113 13217727 ~ 13287287 (-)
G120865 LOC107752772,LOC107697781,LOC107733167,LOC107592781,LOC107674095,LOC107594780 non-coding downstream 127028 13268577 ~ 13269372 (-)
G120833 NA non-coding downstream 212951 13180074 ~ 13183449 (-)
G120843 NA non-coding downstream 222209 13173948 ~ 13174191 (-)
G120929 NA non-coding upstream 378359 13777725 ~ 13815014 (-)
G120980 NA non-coding upstream 534054 13933420 ~ 13933685 (-)
G120982 NA non-coding upstream 564227 13963593 ~ 13963870 (-)
G120983 NA non-coding upstream 576381 13975747 ~ 13976226 (-)
G120989 NA non-coding upstream 689274 14088640 ~ 14088875 (-)
LOC122361883 LOC107592775,LOC107752809,LOC100537549,LOC108433935,LOC107733136,LOC107674087 other downstream 195708 13193177 ~ 13200692 (-)
G120660 LOC107752798,LOC107592762,LOC107697764,LOC107733171 other downstream 575732 12817192 ~ 12820668 (-)
LOC122361973 LOC107592804,LOC107697765,LOC107752799,LOC107674033,LOC107733077 other downstream 604531 12663239 ~ 12791869 (-)
lin52 lin52,LOC107594798 other downstream 1004852 12381281 ~ 12391548 (-)
evla evla,LOC107719466,LOC107697733,LOC107563375,LOC107594809,LOC107733132,LOC108425620 other downstream 1451672 11915468 ~ 11944728 (-)
kidins220a id2a,id2,kidins220,LOC107579075,LOC107707685,LOC107553286,LOC107655320,LOC107752760 other upstream 582181 13981547 ~ 14040211 (-)
LOC122361652 LOC107679745,LOC107752800,LOC107594718 other upstream 1310125 14709491 ~ 14733577 (-)
myo6b myo6b,LOC107741840,LOC107594692,LOC107679792,LOC107600844,LOC107666253 other upstream 1392820 14792186 ~ 14839813 (-)
ptgr2 ptgr2 other upstream 1611460 15010826 ~ 15026415 (-)
crip1 crip1,LOC106611282,LOC107679815,LOC107594706,LOC107600860 other upstream 1660627 15059993 ~ 15064678 (-)

Expression


Co-expression Network