itgb1bp1 (itgb1bp1,LOC107655317,LOC107707691,LOC107679818,LOC107752756)


Basic Information

Item Value
gene id itgb1bp1
gene name itgb1bp1,LOC107655317,LOC107707691,LOC107679818,LOC107752756
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056715.1
NCBI id CM032084.1
chromosome length 22256391
location 14142944 ~ 14147213 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043262967.1
CCCCTTTAAGAAGCGCTGGGTGGAGTCGTACAGGAAGTGAAGTGTCAACGCAAGTCTCgccaaaacagagagagagccGCCGATCGCTGCTTTGATGAACCTACCTATTAATAATCATTACAGCCGTACACTGCTGCATAGTGAGCTCAAAACAGAGACTCCATCTGCTGGTAAGCTGGAGACCTGCAGCGCTGGCGTCATGGTGAAGGATGTTTCGAAAGGTCAAGAAGCgccacagcagcagcagctcccAGAGCAGTGAGGTCAGCACTAAGAGCAAGTCAGTAGATTCCAGTTTGGGAGGCCTGTCTAGGTCAAGCACAGTTGCCAGTCTTGACACAGACTCCACCAAGAGCTCAAGTAACGCCGTGTCTGACGCCTGTGCCGAGTTCAGGGTCAAGTATGTGGGAGCCATTGAGAAGCTGCGGTTTGAGATGAGCAAAACCCTGCAGGAGCCTCTGGACCTGATCAACTACATCGATGCGGCTCAGCAAGATGGAAAACTGCCATTTGTGCCTGGAGATGAGGAGATGATTCTGGGGGTGTCCAAGTATGGAGTTAAAGTGGCCTCACTGGACCAGTGTGATGTGCTTCACCGTCACCCGCTCTACCTGATTGTACGCATGCTTTGCTATGATGACGGTCTGGGTGCTGGAAAGAACCTGCTGGCCCTGAAGACCACGGATGCAGAGCAGCAGGAGTGCAGCATCTGGGTGTATCAGTGCAGCAGTGCGGAACAAGCCCAGGCCATCTGTAAAGTACTGTCCACCTCCTTCGACTGTGCCCTGGCCTCAGAGAAGTCCTGAGCCCTGTTTGGGAGCGTTCCTGTTCTTCCACCCTCACTCGTTCCTTCAGGAGGAGCAGAAGGTGccctttttaaaaagcatctgACAGAAACGCTGGAATTCGTCTCGTTCTGATACAGCCGCTCGCTCTTTGTTCAGCATGAAAGGGCGGCCATCTCAACCAAATGTTTACACCATATACATCGGTCCCATCATCCTCTTCTCTTAACAGCCCCACCGCAACCCAAAAGCCAAGTTTGAGCTGCGTCTATTTTTGTAACCtaatttaatcttatttaatgtaaatatacagtaacCTCAGAGCACACTTCCCACCGGGGGCCAGTGAATCTGGGATTTTTAGGCTCCAGTGGGATTTGTGTAAACCACGGTACATTAACGTCAGTGTGAACACAAAGATGCTGTAAATCCTTTGCGTCCTTTATATGTAGATGCCCCTCTTTTGTGGTCCTCCTGGTCCAGGTGGGATCGGTTAATAcggtacaataaataaatgcaaacataatgCGGTTCAA

Function

symbol description
itgb1bp1 Predicted to act upstream of or within integrin-mediated signaling pathway. Orthologous to human ITGB1BP1 (integrin subunit beta 1 binding protein 1).

NR:

description
integrin beta-1-binding protein 1 isoform X2

GO:

id name namespace
GO:0007229 integrin-mediated signaling pathway biological_process

KEGG:

id description
K20058 ITGB1BP1; integrin beta-1-binding protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043262967.1 True 1321 mRNA 0.50 7 14142944 14147213

Neighbor

gene id symbol gene type direction distance location
mboat2a mboat2,mboat2a,LOC107553282,LOC107752759,LOC107655319,LOC107707682 coding downstream 59003 14040353 ~ 14083941 (-)
LOC122361864 fut8a,LOC107674109,LOC107752771,LOC107592788,LOC107553275 coding downstream 510946 13626625 ~ 13631998 (-)
dnal1 dnal1 coding downstream 743578 13396400 ~ 13399366 (-)
tedc1 LOC107752774,LOC107697787,LOC107592785,LOC107733103,LOC107594770,LOC107674045 coding downstream 747325 13384540 ~ 13395619 (-)
tmem121aa tmem121a,tmem121,LOC107594772,LOC107674105,LOC107592808,LOC107697696 coding downstream 797353 13318411 ~ 13345591 (-)
adam17a adam17,adam17a,LOC107752755,LOC107655315,LOC107707689,LOC107563905 coding upstream 13306 14160519 ~ 14171694 (-)
rnf144aa rnf144aa,rnf144a,LOC107752753,LOC107655314,LOC107553279 coding upstream 26058 14173271 ~ 14204581 (-)
rsad2 rsad2,LOC107752752,LOC107553276,LOC107707684,LOC107655310 coding upstream 59567 14206780 ~ 14209877 (-)
LOC122361997 slc22a15,LOC107750851,LOC107717086,LOC107671142,LOC107553868 coding upstream 245190 14392403 ~ 14397785 (-)
LOC122361878 LOC107594701,LOC107679774 coding upstream 251892 14399105 ~ 14406676 (-)
G120989 NA non-coding downstream 54069 14088640 ~ 14088875 (-)
G120983 NA non-coding downstream 166718 13975747 ~ 13976226 (-)
G120982 NA non-coding downstream 179074 13963593 ~ 13963870 (-)
G120980 NA non-coding downstream 209259 13933420 ~ 13933685 (-)
G120929 NA non-coding downstream 327930 13777725 ~ 13815014 (-)
G121051 NA non-coding upstream 244171 14391384 ~ 14392042 (-)
G121069 NA non-coding upstream 304410 14451623 ~ 14456789 (-)
LOC122361512 NA non-coding upstream 314912 14462125 ~ 14580868 (-)
G121096 LOC107752749,LOC107594711,LOC107666252 non-coding upstream 629673 14776886 ~ 14777109 (-)
G121123 NA non-coding upstream 643716 14790929 ~ 14792068 (-)
kidins220a id2a,id2,kidins220,LOC107579075,LOC107707685,LOC107553286,LOC107655320,LOC107752760 other downstream 102733 13981547 ~ 14040211 (-)
LOC122361883 LOC107592775,LOC107752809,LOC100537549,LOC108433935,LOC107733136,LOC107674087 other downstream 942252 13193177 ~ 13200692 (-)
G120660 LOC107752798,LOC107592762,LOC107697764,LOC107733171 other downstream 1322276 12817192 ~ 12820668 (-)
LOC122361973 LOC107592804,LOC107697765,LOC107752799,LOC107674033,LOC107733077 other downstream 1351075 12663239 ~ 12791869 (-)
lin52 lin52,LOC107594798 other downstream 1751396 12381281 ~ 12391548 (-)
LOC122361652 LOC107679745,LOC107752800,LOC107594718 other upstream 562278 14709491 ~ 14733577 (-)
myo6b myo6b,LOC107741840,LOC107594692,LOC107679792,LOC107600844,LOC107666253 other upstream 644973 14792186 ~ 14839813 (-)
ptgr2 ptgr2 other upstream 863613 15010826 ~ 15026415 (-)
crip1 crip1,LOC106611282,LOC107679815,LOC107594706,LOC107600860 other upstream 912780 15059993 ~ 15064678 (-)
crip2 crip2,LOC107594708,LOC107752734,LOC107679813,LOC107666262,LOC107741856,LOC107600859 other upstream 936605 15083818 ~ 15099957 (-)

Expression


Co-expression Network