dlst (dlst,LOC107702243,LOC107724251,LOC107749530,LOC107678142)


Basic Information

Item Value
gene id dlst
gene name dlst,LOC107702243,LOC107724251,LOC107749530,LOC107678142
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056715.1
NCBI id CM032084.1
chromosome length 22256391
location 17543830 ~ 17559163 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043263051.1
CGCTCCGCGCAGTTTCCGGTTGGCGGCGGCGCTGTGTCCGGTGCTGTGCCGTGAGAGCTGCAGAGCGTGCGGTCTACCCCGACGACATGTTGTCCCGTTCCCGCAGTCTCACCTGGAGCCTCGGGCGCTCGATCAGCGCCCTGCGGCAGGGTAACGGTGTTCTCGCCAGACGAGCCGCTTCAGGTATATCAGCGAGTCAGTGTGCCACCTTCAAGAACAGCCCGAGGTGTGAGACCCGGTCGAGCGTCTATCAGATCAGATACTTCAACACCTCCACCGCTCACAGGAATGAAGTCATTACGGTGAAAACGCCAGCGTTTGCTGAGTCTGTCACAGAGGGAGACGTCAGGTGGGAGAAAGCTGTTGGAGACGCCGTCTCTGAAGATGAGGTTGTCTGTGAAATCGAGACGGATAAGACGTCGGTGCAGGTTCCTTCTCCAGCTGCAGGAGTCATCGAGGAGCTGCTGGTTCCTGACGGGGGCAAAGTGGAAGGAGGAACCCCTCTGTTCAGACTCAAGAAAGGAGCTGGAGCTGCTAAGACGACGCCagcacctcctcctcctgcagCAGAGactgctcctcctcctcctcctcctcccgcTGCTCCCGCTGGAGGACCCATCCCCAGCACCATGCCCCCGGTCCCCCCCGTGCCGGCCCAGCCCATCCAGTCCAAACCAGTCTCTGCCATCAAACCCACTgctgctcctcctcctgctgctgACGCCGGAGCCAAAGCCGCCCGATCCGAGCACAGGgtgaagaTGAACCGCATGAGACAGCGGATCGCTCAGCGGCTGAAGGAAGCGCAGAACACCTGTGCCATGCTAACAACCTTCAATGAAGTTGATATGAGCAACATCACAGAGATGAGGAAACAGTATAAAGATGCTTTCCTGAAGAAACATGGCATCAAACTGGGCTTTATGTCTGCGTTTGTGAAAGCGGCCGCCTACGCTCTGACAGACCAGCCTGCTGTTAACGCTGTCATTGATGACACCACCAAAGAGATTGTGTATCGGGATTATGTGGATATCAGCGTGGCAGTCGCTACACCAAAGGGTCTCGTGGTTCCTGTGATCAGAGGAGTGGAGGGAATGAACTTCACAGACATCGAGAAGAGCATTAACGAGCTGGGAGAGAAGGCTCGTAAGAACGAGCTGGCCGTGGAGGACATGGACGGAGGCACCTTCACCATCAGCAACGGAGGAGTGTTCGGCTCCATGTTTGGGACGCCCATCATCAACCCGCCTCAGTCGGCCATTCTGGGCATGCATGGCATCTTTGACCGGCCCGTGGCCATCGCTGGGAAGgtggaGGTCCGGCCCATGATGTACGTGGCTCTGACATACGACCACCGTTTGATCGACGGCAGAGAGGCCGTGACCTTCCTCAGAAAGATCAAATCGGTGGTGGAGGACCCTCGGGTGCTGCTGCTGGACATGTGAACGCCCACCCAACAGGTTCATCTCACACAGGATGGTTACGACCCACAAACCCCATCTGTACACTAGGGACGGAGGCGTCAGGATTTGCATCGATTAGCTTCATGTTGAGTTGTTTTACCATGTATACGTCCGCTGGGTTTTCACTGTTTTGCTGAGGAAAGCGGTCCTGTCATTGTATGTACAAATCAGCGCACAAAACATGCCCCGTGCAATTATTTGTTTCTAAATGGAGAAGAAATGAtagtaatatacagtatgtgataTATTTAATCTCATGGGTGTAAAGTGATTGGAGCCGCCGAGCAGAAACACTATGTTCCCGTGAGTCGCAGGTGTTTGACCTCGACGCGTCCCACACAACTCCAGACCATCAGATCCTGTCTGccggtgtaaaaaaaaaacaaaactatgagattttaaaaaataaaatcaatgaaatgTT

Function

symbol description
dlst Predicted to enable dihydrolipoyllysine-residue succinyltransferase activity. Acts upstream of or within several processes, including ATP biosynthetic process; heart contraction; and mitochondrion morphogenesis. Predicted to be part of oxoglutarate dehydrogenase complex. Is expressed in several structures, including immature eye; musculature system; nervous system; neural plate; and segmental plate. Human ortholog(s) of this gene implicated in Alzheimer's disease and paraganglioma. Orthologous to human DLST (dihydrolipoamide S-succinyltransferase).

NR:

description
PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial

GO:

id name namespace
GO:0006099 tricarboxylic acid cycle biological_process
GO:0045252 oxoglutarate dehydrogenase complex cellular_component
GO:0004149 dihydrolipoyllysine-residue succinyltransferase activity molecular_function

KEGG:

id description
K00658 DLST, sucB; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043263051.1 True 1890 mRNA 0.54 15 17543830 17559163

Neighbor

gene id symbol gene type direction distance location
LOC122362317 LOC107588350 coding downstream 15019 17522974 ~ 17528811 (-)
angel1 angel1 coding downstream 38781 17465870 ~ 17505049 (-)
cdin1 zgc:154061,LOC107665555,LOC107724250,LOC107678147,LOC107554791,LOC107568570 coding downstream 267287 17216049 ~ 17276543 (-)
spred1 LOC107724258,LOC107677686,LOC107749536,LOC107698617,LOC107573584 coding downstream 489532 17036069 ~ 17054298 (-)
fam98b LOC107698618,LOC107568575,LOC107749537 coding downstream 509428 17029621 ~ 17034402 (-)
esrrb esrrb,LOC107678144 coding upstream 78427 17637590 ~ 17690815 (-)
LOC122361798 ift43,LOC107723274 coding upstream 233050 17792213 ~ 17808157 (-)
ttll5 ttll5 coding upstream 274159 17833322 ~ 17911030 (-)
flvcr2a flvcr2,flvcr2a,LOC107702238,LOC107589770,LOC106591116 coding upstream 357039 17916202 ~ 17936224 (-)
jdp2a jdp2,jdp2a,LOC107701522,LOC107589793,LOC107702236 coding upstream 380578 17939741 ~ 17949238 (-)
G121734 NA non-coding downstream 328552 17215055 ~ 17215278 (-)
G121721 NA non-coding downstream 333570 17168223 ~ 17210260 (-)
G121717 meis2,LOC107724236 non-coding downstream 386601 17150512 ~ 17157229 (-)
G121711 meis2,meis2a,LOC107698619 non-coding downstream 394802 17136870 ~ 17149028 (-)
G121715 NA non-coding downstream 411104 17132518 ~ 17132726 (-)
G121852 NA non-coding upstream 23740 17582903 ~ 17583589 (-)
G121854 NA non-coding upstream 61057 17620220 ~ 17620671 (-)
G121905 tgfb3,LOC107688075,LOC107723269 non-coding upstream 231779 17790942 ~ 17810401 (-)
G121965 NA non-coding upstream 446111 18005274 ~ 18005603 (-)
G121980 NA non-coding upstream 511699 18070862 ~ 18132726 (-)
LOC122362005 crim1,LOC107582940,LOC107679775,LOC107662656 other downstream 1592392 15829484 ~ 15951438 (-)
LOC122362003 LOC107664362,LOC107560152,LOC107752022,LOC107658150 other downstream 1776815 15760343 ~ 15767015 (-)
G121456 LOC107660450 other downstream 1803344 15738262 ~ 15740486 (-)
G121438 LOC107708961,LOC107664629,LOC107654010,LOC107719547 other downstream 1854036 15688891 ~ 15689794 (-)
LOC122361708 LOC107598628,LOC107708961,LOC107654010,LOC107719547,LOC107664629,LOC107557341 other downstream 1855390 15683661 ~ 15688440 (-)
acyp1 acyp1 other upstream 403126 17962289 ~ 17963981 (-)
LOC122361562 otofb,LOC107752720,LOC107701524,LOC107723281,LOC108423539 other upstream 422888 17982051 ~ 18004214 (-)
LOC122361613 NA other upstream 720295 18279458 ~ 18281572 (-)
LOC122361943 NA other upstream 1072094 18631257 ~ 18644992 (-)
G122247 NA other upstream 1227719 18786882 ~ 18790880 (-)

Expression


Co-expression Network