dnmt3ab (LOC107679796,LOC107752744,LOC107600869)


Basic Information

Item Value
gene id dnmt3ab
gene name LOC107679796,LOC107752744,LOC107600869
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056715.1
NCBI id CM032084.1
chromosome length 22256391
location 14881454 ~ 14924493 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043263081.1
GGAGCCGCCGTCGGAGCGGCCTCTGCAGTCAGTGAGCGCGGAGCATCTGGAGGAGAGCTGGCCGGCTGGGGAGGCGGTGGAGGACGGGGAGAGCGAAGCAGAAGGAGGATCCGGGAGTCAGCGAAAACAAAAAAGGGGGTCAGGCCTGGAACTTGGCGAAGCGGTCACTCATCTGGCGATGCCGTCCAACACAGTCGCCGCCGCCGCCGCGTTCAAGAGCTCCGACTTCAACTGTGACACCAACGGAAATCAAACGAATGAGAGCTCTAGAATGGACACAATGATAATTGACGAGATGCCTTCGCTCTGCACTCCTGTCCGCAAGGTTGGACGGCCTGGCCGCAAACGCAAGCACCTCCCCGTGGAGGGTTACGGGCCAGTGGATCAGCCGGTGGGCGTGGCTAAGCAGCACAAAGGGGTGGAGCTCCAGTCGTCTTTGCAGTCCCAGAATGGAGATGTTGAGAGGCATGAGAAGAAATCGTGCGAAGGTCGCCACCCCACGCTGGACAAGAATGCTGTGGAAAACGGGCTCCCACGCCAATCAGGCTGCCGGGCCGAGTCGGCCTCCGATTCGAGCCTGAGCCCATCCCAGGACTCAGAGAAGTACGACGAGGAGACACTGCCAACTCTGCCTCGCAAGAAACGAGGGAGACGGAAACTGGAGCGGCCGACTAAATACGTGGAGCACAAGGAGGACGAGGGTGGGGACTCTGCAAAGAATGAGGGAGCTCGAGGGAGGCTCCGTGGGGGAGTGGGCTGGGAAGTCAGCCTCCGTCAAAGACCCATGCCCAGAGTAACCTTCCAGGCCGGTGACCCTTATTACATTAGCAAGAGGACCAGGGAGGAGTTGCTGGCCAAGTGGAAGTTGGAGTTCCCTACGTTGCAGGCAGAGAAGAAGGCAAATCTGGTGTCTGTGATGAACTCAATGGAGGACCATGGCGAGGTAGAGTCGGAGCATCAAAAAGAAAGCTCCATAATCACCGTCCCACTACTCTTTCCTCCACCGATGCCGCCAACACAGCAGCAACCGCCACAGCCTCAAGCTCAACCTCAGACCAACCTCAAATCCCAGCCTTCTCCCCAGCAGCAACCTCCACCAttccaacagcagcagcagcagcagcctacAGACCCAGCCTCTCCAACCGTTGCCACCACCCCAGAGCCCGTGTCTATAGGGGACGGAGACAAAACCTCACCCAAGTCCACTGACACAGAGACGGAGTACGAGGATGGCCGAGGTTTCGGCATTGGTGAGCTTGTGTGGGGAAAGTTACGAGGATTCTCCTGGTGGCCCGGTCGGATTGTATCCTGGTTAATGACTGGACGCAGCCGGGCGGCTGAGGGCACTAGATGGGTCATGTGGTTCGGTGACGGCAAGTTTTCTGTGGTCTGTGTCGAGAAACTGTTGCCTTTAAGTTCCTTCCACAACGCCTTTCACCAGCCAACCTACAATAAACAACCAATGTACAAGAAAGCCATCTTTGAAGTGCTACAGGTAGCCAGCACTAGAGCAGGCAAGACCTTCCTCACATGCCCGGAGAGTGACGACACTGACACTTCTAAGTCAGTagacatgcaaaacaaacagatgaTTGAATGGGCCATGACGGGATTTCAGCCCACCGGACCTAAAGGTCTAGAGCCGCCTGAAGAGGAACGTAACCCCTACAAGGAAGTGTATCCAGAGATGTGGGTGGAGCCGGAAGCGGCGGCCTACACGCCCCCACCAGCAAAAAGGCCCCGCAAGAGCACAGCCACAGAGAAACCCAAGGTCAAAGACATCATCGACGAGCGGACTCGAGaGAGGCTTGTATACGAAGTTCGTCAGAAATGTAGAAACATTGAAGACATCTGCATCTCTTGTGGCAGCCTTAATGTTTCCCTGGAGCACCCACTCTTCATTGGAGGAATGTGCCAAAGCTGTAAGAACTGCTTCCTAGAATGTGCTTATCAATACGATGACGATGGCTACCAGTCCTATTGTACTATCTGCTGTGGAGGGAGGGAAGTACTCATGTGCGGAAACAATAACTGTTGCAGGTGTTTctgtgtggagtgtgtggaTCTGTTAGTGGGGCCCGGCGCGGCGCAGGCAGCTATTAAAGAAGACCCGTGGAACTGCTATATGTGTGGGCCGAAGGCTCAGTACGGCCTGCTGGAGCGCCGAGCCGATTGGCCTTGCAGACTGCAGCACTTCTTTGCCAACAATCACGACCAGGACTTTgAACCACCGAGGCTCTACCCTTCGGTTTTGGCAGAGAAAAGGAAACCCATTCGCGTCCTGTCACTTTTTGATGGGATCGCAACAGGGCTGCTGGTTCTGAAGGAGCTGGGGATCCAGGTGGAGCGTTACGTGGCCTCAGAAGTATGCGAGGACTCAATCACTGTGGGCATCGTTCGGCACCAGGGACGCATCATGTACGTGGGAGACGTGAGAAACGTCACCCGTAAGAACATTCAGGAATGGGGTCCGTTTGATCTTGTCATCGGTGGAAGTCCGTGCAATGACTTGTCCATAGTGAATCCTGCAAGAAAAGGTCTCTACGAGGGCACGGGTCGACTCTTCTTCGAGTTTTACCGGCTGTTACACGAGGCCCGACCTAAAGAAGGAGATAACAGGCCGTTCTTCTGGCTCTTTTAGAATGTGGTGGCCATGGGCGTCAGCGACAAGAGGGACATCTCTCGCTTTTTGGAGTGCAACCCAGTGATGATCGATGCCAAGGAGGTGTCCGCTGCCCACAGAGCTCGTTACTTTTGGGGTAACCTGCCCGGCATGAACAGACCGTTGAGCGCCATGTGCACTGATAAACTGGACCTTCAAGACTGCTTGGAGCATGGCAGGACAGCTAAGGTACCTCTCAGACTCGTCCTCAATCGATTTCTGGATGCGGCAGTTTAAATCGGTTTCTTTTCGCATCTTTTTACAGTTCGATAAAGTGCGGACCATCACCACTCGGTCAAATTCCATAAAGCAGGGCAAAGACCAGCACTTCCCTGTCTTCATGAATGAAAAAGAGGACATCCTTTGGTGCACTGAGATGGAGAGGTATGACGAAATGCCTTTACGACGTTCTAAGCTATAAGTCCAGATGTAAATGTGTAATGTCACACTGACATGTGTTCAACAGAGAGATCTCGAAGGGCCTCTTCAGTGAACAGTGAGTTTTACTTTATATTGATTGAATCATCAGTCATCTACTGCCTCACTGAAACCATATCCTGCTCAGAAGAACAATCGATCAATACAGTGAGACATACATTGATATAAACATTGATGCGCACCATGAAATGCCATGACAAACACTATTTTTACCTGGCTCGATTTAAACctataaaatcttttttgggGGATTCAAACACAAGTTGTCAGTTAAGACAAATAAGAAAGTCAACGCGCTGTTGCTTGGTCGAGTTTAAACTAATgcaatgaaaaattacaaaaacataaataaaatgtaaatataaatactgattcaaatatttcaaaaaaatccaATGATATGCCAATGGTACTGTTTATATACAGACTAAGCCAAAACAGGAAATCATTTTCTTTGATCACGGATAACCAGCGACATTTAAAAGCCTTGTTTTAGTATAGTGCACGATTAACAGGTGATATCAGTATGGACATCAGCACAGATATACTACACATGCAATAGAGTCACGTGTCTGACCTTCGAATGGGTATAAATGATAGAAACACTAAATGTTTTGTACCCCTAGTGCTGACCACTTGTGATCTCCCACttgatattattattcaaaaggGATTTTTGTTGGACAGAAAGTTCATGCCCATGAGCATCAATACATTCGGTCCAGTTTCTTTGTCCCTTTTTTAATGACGTTTTCAGTGAACTACTTAttagtaaaaactgtaatatcattacaattttaaaacgaCTGTTTcctattagaatatattttaaaatataattagcagctgtgatggcaaagctgaattttcagcatcctgtcacacgatccttcagaaatcattctgatatgctcaAAACCATTCCTTGCATTATACTactcagtgtttgtgtgtgtaaactgtggtatttttttttagaaataaaagtcttatcttattttataagtaaatataaacatgtatttgtcacgtttgatcgatttaatgcgTCCTGTGGGAtattctgcaaaacaaaaattataaaaagataaCCCAGATTGTTCATAATCCGTCCGTTGGCATCGTGGCGTCATGCCGCACTCGTGGAACTAACTTCCTGCCCTTTTCTCCTCTGATCAGGGTGTTCGGCTTCCCTGTCCATTACACAGACGTGTCAAACATGAGTCGTCTGGCCAGGCAGAGGCTGCTGGGAAGGTCGTGGAGCGTCCCGGTCATCCGTCACTTGTTTGCACCACTCAAAGAGTACTTCGCCTGCATCTGAA
>XM_043263082.1
CGGAGCCGCCGTCGGAGCGGCCTCTGCAGTCAGTGAGCGCGGAGCATCTGGAGGAGAGCTGGCCGGCTGGGGAGGCGGTGGAGGACGGGGAGAGCGAAGCAGAAGGAGGATCCGGGAGTCAGCGAAAACAAAAAAGGGGGTCAGGCCTGGAACTTGGCGAAGCGGTCACTCATCTGGCGATGCCGTCCAACACAGTCGCCGCCGCCGCCGCGTTCAAGAGCTCCGACTTCAACTGTGACACCAACGGAAATCAAACGAATGAGAGCTCTAGAATGGACACAATGATAATTGACGAGATGCCTTCGCTCTGCACTCCTGTCCGCAAGGTTGGACGGCCTGGCCGCAAACGCAAGCACCTCCCCGTGGAGGGTTACGGGCCAGTGGATCAGCCGGTGGGCGTGGCTAAGCAGCACAAAGGGGTGGAGCTCCAGTCGTCTTTGCAGTCCCAGAATGGAGATGTTGAGAGGCATGAGAAGAAATCGTGCGAAGGTCGCCACCCCACGCTGGACAAGAATGCTGTGGAAAACGGGCTCCCACGCCAATCAGGCTGCCGGGCCGAGTCGGCCTCCGATTCGAGCCTGAGCCCATCCCAGGACTCAGAGAAGTACGACGAGGAGACACTGCCAACTCTGCCTCGCAAGAAACGAGGGAGACGGAAACTGGAGCGGCCGACTAAATACGTGGAGCACAAGGAGGACGAGGGTGGGGACTCTGCAAAGAATGAGGGAGCTCGAGGGAGGCTCCGTGGGGGAGTGGGCTGGGAAGTCAGCCTCCGTCAAAGACCCATGCCCAGAGTAACCTTCCAGGCCGGTGACCCTTATTACATTAGCAAGAGGACCAGGGAGGAGTTGCTGGCCAAGTGGAAGTTGGAGTTCCCTACGTTGCAGGCAGAGAAGAAGGCAAATCTGGTGTCTGTGATGAACTCAATGGAGGACCATGGCGAGGTAGAGTCGGAGCATCAAAAAGAAAGCTCCATAATCACCGTCCCACTACTCTTTCCTCCACCGATGCCGCCAACACAGCAGCAACCGCCACAGCCTCAAGCTCAACCTCAGACCAACCTCAAATCCCAGCCTTCTCCCCAGCAGCAACCTCCACCAttccaacagcagcagcagcagcagcctacAGACCCAGCCTCTCCAACCGTTGCCACCACCCCAGAGCCCGTGTCTATAGGGGACGGAGACAAAACCTCACCCAAGTCCACTGACACAGAGACGGAGTACGAGGATGGCCGAGGTTTCGGCATTGGTGAGCTTGTGTGGGGAAAGTTACGAGGATTCTCCTGGTGGCCCGGTCGGATTGTATCCTGGTTAATGACTGGACGCAGCCGGGCGGCTGAGGGCACTAGATGGGTCATGTGGTTCGGTGACGGCAAGTTTTCTGTGGTCTGTGTCGAGAAACTGTTGCCTTTAAGTTCCTTCCACAACGCCTTTCACCAGCCAACCTACAATAAACAACCAATGTACAAGAAAGCCATCTTTGAAGTGCTACAGGTAGCCAGCACTAGAGCAGGCAAGACCTTCCTCACATGCCCGGAGAGTGACGACACTGACACTTCTAAGTCAGTagacatgcaaaacaaacagatgaTTGAATGGGCCATGACGGGATTTCAGCCCACCGGACCTAAAGGTCTAGAGCCGCCTGAAGAGGAACGTAACCCCTACAAGGAAGTGTATCCAGAGATGTGGGTGGAGCCGGAAGCGGCGGCCTACACGCCCCCACCAGCAAAAAGGCCCCGCAAGAGCACAGCCACAGAGAAACCCAAGGTCAAAGACATCATCGACGAGCGGACTCGAGaGAGGCTTGTATACGAAGTTCGTCAGAAATGTAGAAACATTGAAGACATCTGCATCTCTTGTGGCAGCCTTAATGTTTCCCTGGAGCACCCACTCTTCATTGGAGGAATGTGCCAAAGCTGTAAGAACTGCTTCCTAGAATGTGCTTATCAATACGATGACGATGGCTACCAGTCCTATTGTACTATCTGCTGTGGAGGGAGGGAAGTACTCATGTGCGGAAACAATAACTGTTGCAGGTGTTTctgtgtggagtgtgtggaTCTGTTAGTGGGGCCCGGCGCGGCGCAGGCAGCTATTAAAGAAGACCCGTGGAACTGCTATATGTGTGGGCCGAAGGCTCAGTACGGCCTGCTGGAGCGCCGAGCCGATTGGCCTTGCAGACTGCAGCACTTCTTTGCCAACAATCACGACCAGGACTTTgAACCACCGAGGCTCTACCCTTCGGTTTTGGCAGAGAAAAGGAAACCCATTCGCGTCCTGTCACTTTTTGATGGGATCGCAACAGGGCTGCTGGTTCTGAAGGAGCTGGGGATCCAGGTGGAGCGTTACGTGGCCTCAGAAGTATGCGAGGACTCAATCACTGTGGGCATCGTTCGGCACCAGGGACGCATCATGTACGTGGGAGACGTGAGAAACGTCACCCGTAAGAACATTCAGGAATGGGGTCCGTTTGATCTTGTCATCGGTGGAAGTCCGTGCAATGACTTGTCCATAGTGAATCCTGCAAGAAAAGAGGGCACGGGTCGACTCTTCTTCGAGTTTTACCGGCTGTTACACGAGGCCCGACCTAAAGAAGGAGATAACAGGCCGTTCTTCTGGCTCTTTTAGAATGTGGTGGCCATGGGCGTCAGCGACAAGAGGGACATCTCTCGCTTTTTGGAGTGCAACCCAGTGATGATCGATGCCAAGGAGGTGTCCGCTGCCCACAGAGCTCGTTACTTTTGGGGTAACCTGCCCGGCATGAACAGACCGTTGAGCGCCATGTGCACTGATAAACTGGACCTTCAAGACTGCTTGGAGCATGGCAGGACAGCTAAGGTACCTCTCAGACTCGTCCTCAATCGATTTCTGGATGCGGCAGTTTAAATCGGTTTCTTTTCGCATCTTTTTACAGTTCGATAAAGTGCGGACCATCACCACTCGGTCAAATTCCATAAAGCAGGGCAAAGACCAGCACTTCCCTGTCTTCATGAATGAAAAAGAGGACATCCTTTGGTGCACTGAGATGGAGAGGTATGACGAAATGCCTTTACGACGTTCTAAGCTATAAGTCCAGATGTAAATGTGTAATGTCACACTGACATGTGTTCAACAGAGAGATCTCGAAGGGCCTCTTCAGTGAACAGTGAGTTTTACTTTATATTGATTGAATCATCAGTCATCTACTGCCTCACTGAAACCATATCCTGCTCAGAAGAACAATCGATCAATACAGTGAGACATACATTGATATAAACATTGATGCGCACCATGAAATGCCATGACAAACACTATTTTTACCTGGCTCGATTTAAACctataaaatcttttttgggGGATTCAAACACAAGTTGTCAGTTAAGACAAATAAGAAAGTCAACGCGCTGTTGCTTGGTCGAGTTTAAACTAATgcaatgaaaaattacaaaaacataaataaaatgtaaatataaatactgattcaaatatttcaaaaaaatccaATGATATGCCAATGGTACTGTTTATATACAGACTAAGCCAAAACAGGAAATCATTTTCTTTGATCACGGATAACCAGCGACATTTAAAAGCCTTGTTTTAGTATAGTGCACGATTAACAGGTGATATCAGTATGGACATCAGCACAGATATACTACACATGCAATAGAGTCACGTGTCTGACCTTCGAATGGGTATAAATGATAGAAACACTAAATGTTTTGTACCCCTAGTGCTGACCACTTGTGATCTCCCACttgatattattattcaaaaggGATTTTTGTTGGACAGAAAGTTCATGCCCATGAGCATCAATACATTCGGTCCAGTTTCTTTGTCCCTTTTTTAATGACGTTTTCAGTGAACTACTTAttagtaaaaactgtaatatcattacaattttaaaacgaCTGTTTcctattagaatatattttaaaatataattagcagctgtgatggcaaagctgaattttcagcatcctgtcacacgatccttcagaaatcattctgatatgctcaAAACCATTCCTTGCATTATACTactcagtgtttgtgtgtgtaaactgtggtatttttttttagaaataaaagtcttatcttattttataagtaaatataaacatgtatttgtcacgtttgatcgatttaatgcgTCCTGTGGGAtattctgcaaaacaaaaattataaaaagataaCCCAGATTGTTCATAATCCGTCCGTTGGCATCGTGGCGTCATGCCGCACTCGTGGAACTAACTTCCTGCCCTTTTCTCCTCTGATCAGGGTGTTCGGCTTCCCTGTCCATTACACAGACGTGTCAAACATGAGTCGTCTGGCCAGGCAGAGGCTGCTGGGAAGGTCGTGGAGCGTCCCGGTCATCCGTCACTTGTTTGCACCACTCAAAGAGTACTTCGCCTGCATCTGAA

Function

NR:

description
PREDICTED: DNA (cytosine-5)-methyltransferase 3A-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043263081.1 True 4425 mRNA 0.49 21 14881454 14924492
XM_043263082.1 False 4417 mRNA 0.49 21 14881454 14924493

Neighbor

gene id symbol gene type direction distance location
dpysl5a dpysl5a,dpysl5,LOC107741845,LOC107666251,LOC107752745,LOC107679787,LOC107594693 coding downstream 4930 14861336 ~ 14876524 (-)
mapre3a mapre3a,LOC107594695,LOC107679788,LOC107666269,LOC107752746,LOC107741846,LOC108425644 coding downstream 21004 14851294 ~ 14860450 (-)
senp6b LOC107752747,LOC107679785 coding downstream 31571 14843023 ~ 14849883 (-)
colec11 colec11 coding downstream 140906 14735161 ~ 14740548 (-)
sox11a sox11a,LOC107752751,LOC107594691,LOC107679744 coding downstream 369791 14509772 ~ 14511663 (-)
dtnbb LOC107600868,LOC107741848,LOC108425647 coding upstream 2673 14927166 ~ 14969227 (-)
asxl2 asxl2,LOC107679772,LOC107666255 coding upstream 46407 14970900 ~ 14987934 (-)
kif3cb kif3cb,LOC107594701,LOC107679774,LOC107752740,LOC107741850,LOC107600866,LOC107666256 coding upstream 65167 14989660 ~ 14994515 (-)
zfp36l1a zfp36l1a,LOC107752727,LOC107577075,LOC107679798,LOC107666263,LOC107600858,LOC107741857 coding upstream 288379 15212872 ~ 15218170 (-)
rps6ka5 rps6ka5,LOC107582903,LOC107730213,LOC107741860,LOC107679795,LOC107600856,LOC107666260 coding upstream 558618 15483111 ~ 15505931 (-)
G121123 NA non-coding downstream 89386 14790929 ~ 14792068 (-)
G121096 LOC107752749,LOC107594711,LOC107666252 non-coding downstream 104345 14776886 ~ 14777109 (-)
LOC122361512 NA non-coding downstream 300586 14462125 ~ 14580868 (-)
G121069 NA non-coding downstream 424665 14451623 ~ 14456789 (-)
G121051 NA non-coding downstream 489412 14391384 ~ 14392042 (-)
G121214 NA non-coding upstream 115230 15039723 ~ 15045366 (-)
LOC122361632 NA non-coding upstream 277203 15201696 ~ 15210544 (-)
G121269 NA non-coding upstream 349590 15274083 ~ 15274615 (-)
G121301 NA non-coding upstream 388072 15312565 ~ 15313252 (-)
G121320 NA non-coding upstream 470512 15395005 ~ 15395362 (-)
myo6b myo6b,LOC107741840,LOC107594692,LOC107679792,LOC107600844,LOC107666253 other downstream 41641 14792186 ~ 14839813 (-)
LOC122361652 LOC107679745,LOC107752800,LOC107594718 other downstream 147877 14709491 ~ 14733577 (-)
kidins220a id2a,id2,kidins220,LOC107579075,LOC107707685,LOC107553286,LOC107655320,LOC107752760 other downstream 841243 13981547 ~ 14040211 (-)
LOC122361883 LOC107592775,LOC107752809,LOC100537549,LOC108433935,LOC107733136,LOC107674087 other downstream 1680762 13193177 ~ 13200692 (-)
G120660 LOC107752798,LOC107592762,LOC107697764,LOC107733171 other downstream 2060786 12817192 ~ 12820668 (-)
ptgr2 ptgr2 other upstream 86333 15010826 ~ 15026415 (-)
crip1 crip1,LOC106611282,LOC107679815,LOC107594706,LOC107600860 other upstream 135500 15059993 ~ 15064678 (-)
crip2 crip2,LOC107594708,LOC107752734,LOC107679813,LOC107666262,LOC107741856,LOC107600859 other upstream 159325 15083818 ~ 15099957 (-)
pax9 pax9,LOC107679748,LOC107666242,LOC107741874 other upstream 473295 15397788 ~ 15406503 (-)
LOC122361708 LOC107598628,LOC107708961,LOC107654010,LOC107719547,LOC107664629,LOC107557341 other upstream 759168 15683661 ~ 15688440 (-)

Expression


Co-expression Network