efr3ba (efr3ba,LOC107697777,LOC107592778,LOC107752767,LOC107733134)


Basic Information

Item Value
gene id efr3ba
gene name efr3ba,LOC107697777,LOC107592778,LOC107752767,LOC107733134
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056715.1
NCBI id CM032084.1
chromosome length 22256391
location 13206002 ~ 13227737 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043263257.1
GTTGAATGGTCAGGAGGTGTGTGAATGTGTTCATCTTTGCCGAGGAGGGGCTGCATGCgtgcaggagtgtgtgtgaatgtgtatccgtgtgcgtgtgtgtgcacctgTGTGTTAAAGCAGCATTGTTCCCGATAGAGGGAAAGCTGTGCCGCGCTGTTTGGAAAATCCAAGGTCATTGGAGCCCGGTCACATGCGCCGTAtgagagtgtgcatgtgtgattGAGCGTCTGTGAGAGcgcgcgtgcatgtgtgtgtgtgtgtgtgtctctctctctctctctctctctggctatGTGACAGAGAAAGAGGCTTCAGGCAAAGAACAGAGAATTTCATCAGGTTTTCCATCAATGTACGGTGTTTGTGGATGCTGTGGGGCCCTGAGACCCCGCTATAAGAGGCTGGTGGATAACATCTTTCCGGAAGACCCTGAGGACGGATTGGTGAAAGCTAACATGGAGAAGCTAACTTTTTACGCCTTGTCTGCTCCGGAGAAACTAGACCGTATCGGTGCCTACCTGTCAGAGAGGCTATCTAGAGACGTCGCCCGGCATAGATATGGGTACGTTTGCATCGCTATGGAGGCACTGGACCAGCTGTTGATGGCCTGTCACTGTCAGAGTATAAACCTTTTTGTGGAAAGTTTCCTCACTATGGTGCGCAAGCTGCTGGAAGCAGACAAACCCAATTTACAGATCCTGGGCACTAACTCATTTGTAAAGTTTGCCAACATAGAGGAGGACACAGCATCGTACCATCGAAGCTACGATTTCTTCGTGTCACGCTTCAGTGAGATGTGCCATTCCAGTTACGAGGATCCAGATATTCGCACAAAGATTCGTATGGCAGGGATCAGGGGTCTTCAGGGGGTGGTGAGGAAAACCGTCAATGATGAACTGCAGGCAAATATTTGGGACCCTCAGCACATGGACAAAATCGTGCCGTCACTCCTTTTCAACCTCCAGCAGGAAGAAGGCATAGAGAGGTCTCCTTCTCCAGAGactgagaaagagaaggagagtcCGGTGGAGCTGACAGAGAGATGCTTTCGAGAGCTTTTAGGGCGAGCGGCCTACGGCAACATCAAGAACGCCGTGAAACCTGTGCTCATGCACCTTGATAACCATTCGCTCTGGGAGAGCAAAACATTTGCAGTGCGCTGCTTTAAAATCATTATGTACTCCATTCAGTCTCAACATTCGCATCTGGTGATTCAACAGCTGTTGGGCCACTTGGATGCCAACAGTAAGAATTCAGCCCGAGTGCGTGCCGGGATAGTGGAGGTGATCTCAGAGGCAGCTGTCATAGAAGCCAGTGGATCCATAGGGCCCACAGTACTGGAAGTGTTCAATACTCTACTGAAGCAGCTCAGACTCAGTGTGGACTACGAGCTTACAGGATCCTACGACTCTTTCGCAAACATGGGCTCCAAGGTCATTAAAGTACACGAGGAGAGACAACTCCAAGAAGCTGTCATCAAAACTATTGGCTCATTTGCAAACACACTTCCCACCTACCAGCGCTCAGAAGTCATGCTGTTCATCATTGGTAAAATTCCCGTGCCAGGCATGTATCCGGCTCTGGGGTCAGCCAACACCGGGGTTGAGGGCAGCAGGATGATCCAGATTATGCTGCTGAAGTCTCTTCTGCAGGTAACAGCAGGATTCCAGTCTACAAACATTTTGACAGCACTTCCCACCTCATTCCTGGACCCGCTCTTGTCCTTCACTCTTATGGAGGACGCAGAGATTCGTCTACTCGTTCTTGACATTCTCATCAGCATCATTGATCGCCATGACAACCGGCACAAATTCTCCCCTGTCAGAATTATCTCAGATATCTCAGTACTGAAGTTGAAAGTAGACAAGTGCTCAAGGCAGGATAACCTGTTCATGAAGAAACACAGCCAGAGGCTGTACCGTCACATTTACCTTGCCTGCAAAGAGGAGAGCAGCGTCCAGCGGCACTTTGAGTCTCTGTATACTCTGCTGGGGTTGGTCTGTGTGGAGCTGGCCAATGAAGAGGTGGTAGTGGACCTGATCCGACTGGCTCTGGCATTACAGGACCTGGCCTTGACTGAAGAGGCTCTTCCTGTATACAGCCGCTGTGCCATCCACGCTCTGTCAGCTGCGTACCTGAACCTCATCAGCCAGCTGACCACTGTGCCCACCTTCTGCCAACACGTCCATGTGGTGATTGAGTCAAGAAAGAAACTTGTTCCTTTCCTGCTGCCAGAGGATGTTCTTGTTGAGAGCTCAAAggTCCCAGAGAAGCTGGAGAAGGTGGAGGGAGAGGTGCTGTTTGTGCAGGCAAAGATAGCAGAGATGCTGGGCGGCAGCGGATACAACACAGAGAGACTGGCCACTTCATACATCCCACAGATCACAGATGAAGACAGATTGTCTAAGAGGAAGAGTATTGGAGACACCATCTCCCTGCAGTTAGAGATGGAGTCTAGAAACAGTCCAGAGAAAGAGCAGAGATCCACAGCAGagcaaataacatttgaaaCTCTTAAACAAGCCATTGtaGACAGCGTGAATGTGGAGGAGCTGGAGAGAGAGCGCAGAAGGCAGGTGGTGGAGAGGTTTCAGACCGCCCCGTTTGAGGAGATAGCAGCCCACTGCGGGGCCAGGGCTTCCCTGTTGCAAAGTAAGCTCAACCAAATCTTCGAAATCACAATCAGGCCTCCTCCGAGTCCGTCTGGCTCTGTCGGGAACGGTCACGGCCGGAGCCGCTCCGTGCCAGTCTATGAAATGAAGTTTCCAGACCTCTGTGTATACTGAGAGACCCAGGAGCCCTAGTCACTACGTACAGCTGTATTCATCGCACTATTATCACTCCTTCTTAATGTCCAGGTGTAACTCTGTTTCTTCTAAACCGTGTTCTCTAGTGTAATATCAGACCTTAGATAAGGCTGTACTTTATCCTGAAGTCTATTTATGccaacaaagacaaacaaaccaAGAGAATTTACCATATGTTGGTTAAATATGCACTTAGTCTAGACGAAAAAGGACCGAATTTATCGACAAATGATCGTATCTTGTCTGATAGCGTAGAGAGCTGAATGAGGTTTTCATGTTTAGGTTCCTGTGTAAGTGTGTACAGTCTGTTGTAATCGGTTTTCTTGTACAAATTAAGAGTAAAGCTGCCTTAAATTTTGTATCTTGAGTTAAGAACATTTGTCCAAGAATCTCCCAAATGTGTTTCCAAAtattcttgttgttttttttccaacttGTGGGTATGAACAATTTAGCTAAATACAAgctttgtttgcatgtttaaatCGTCTCTACATGCTGCAATAAAAGTTGTATTAAAAGCAATAACTACTGAATTTAAACGTCAAAACTCTTTAAGTAGAAGCTGAAGAAATAATACAGCAAATGCTAAGTTTCACATTCAACTCAATGCAGTATTCCAGTCCGAACTGATGGATTAATGACGTTGTGTATAAGTGAAAAGTGAATGTGTTACACTGGCACAAGTGTGCACAGACCTATATCATTATATTCTTATTGATGCAGTTTCTTACGTGAAAGGTTTAATTGCTTAAATCGTTTAGTTTTTCTGGAACATAgtgaattaatattattattagtaaaaatTTCACAGGCAAAAAAAGTCCATCGTCTACTGGCAATGGTGTCACGATGTATAAAGCACAGTTAAGCAGAAATCACTTTCAAAGCGAATTTGCGAAACCAGTTTGAACCCATTGCGAAATCTGCTCGGGGAAATCCTTTGCTCTGATGTGTATTGTATTCCTATTGAAATGACTGTATTTTGCTATATTCTCTTTATAGAGCAGCTTTCCGTTGGCCAAAACAAGCCGCCTCATGGGAAATTCTCATTGCCATAATGTCATTTCGCCCACAGAATTAAAAGGTAAAAGTTCTAGAGGtaaattccattaaaaaaaaaaataaaacccccGCTTGGGGTCTAAAGGGATCGTCTACCTTTTTAACCatgatttgtgttttattttacctCAATTTGTGAACAATTTCAGGTTTACATTGAGATTTCGTTGTCCTGGATTTAAacgcagcactttaaagctcaCTGTGTAAATGTGGTGTATGCTGGAAAATATACTTCATGTTGTGCGAAATTTCATCTTGATGTGTTCCTGTCTAAACTTTATGGTGTGTTATCTGTTGTCCTGTCATATTGTTCCTGGTACCACATAAAAGCGTGGacgtttatgatgtttttagttCATCAAGTCATTTTTCATGTTAacggtattttattttatattcatcttTGGTGAAACCTTGAATTGATTTGcaagcataaaaacaaatggGTTTTATCTTCTCTGTCTATATGGCTATGATGAAATATCCTAGACCGCTTACATGTGAGGTGATTTTGCATGTACGAAATATCAGAGTTTAGTCTTTCCTTGTCAGCTGCTGCTGCATGCACTGGGTGTTTTGTCCGTgattttcccatttttttcatttaagtgaGATCATTACAACACTGTGGACCGTAATAAGTCAACTTAGTTGTGTTTAGATGCCGTCACTGTAAAAGGATGAGACTTcagaactgtgttctgtgaaTGTTTGCCTACATGAAATCATTAAGTGATGTACATATGTGGTGTGAATAACAAGAATATCGATTAAAGACtaattttatgaattcaaa
>XM_043263258.1
TGTTGAATGGTCAGGAGGTGTGTGAATGTGTTCATCTTTGCCGAGGAGGGGCTGCATGCgtgcaggagtgtgtgtgaatgtgtatccgtgtgcgtgtgtgtgcacctgTGTGTTAAAGCAGCATTGTTCCCGATAGAGGGAAAGCTGTGCCGCGCTGTTTGGAAAATCCAAGGTCATTGGAGCCCGGTCACATGCGCCGTAtgagagtgtgcatgtgtgattGAGCGTCTGTGAGAGcgcgcgtgcatgtgtgtgtgtgtgtgtgtctctctctctctctctctctctggctatGTGACAGAGAAAGAGGCTTCAGGCAAAGAACAGAGAATTTCATCAGGTTTTCCATCAATGTACGGTGTTTGTGGATGCTGTGGGGCCCTGAGACCCCGCTATAAGAGGCTGGTGGATAACATCTTTCCGGAAGACCCTGAGGACGGATTGGTGAAAGCTAACATGGAGAAGCTAACTTTTTACGCCTTGTCTGCTCCGGAGAAACTAGACCGTATCGGTGCCTACCTGTCAGAGAGGCTATCTAGAGACGTCGCCCGGCATAGATATGGGTACGTTTGCATCGCTATGGAGGCACTGGACCAGCTGTTGATGGCCTGTCACTGTCAGAGTATAAACCTTTTTGTGGAAAGTTTCCTCACTATGGTGCGCAAGCTGCTGGAAGCAGACAAACCCAATTTACAGATCCTGGGCACTAACTCATTTGTAAAGTTTGCCAACATAGAGGAGGACACAGCATCGTACCATCGAAGCTACGATTTCTTCGTGTCACGCTTCAGTGAGATGTGCCATTCCAGTTACGAGGATCCAGATATTCGCACAAAGATTCGTATGGCAGGGATCAGGGGTCTTCAGGGGGTGGTGAGGAAAACCGTCAATGATGAACTGCAGGCAAATATTTGGGACCCTCAGCACATGGACAAAATCGTGCCGTCACTCCTTTTCAACCTCCAGCAGGAAGAAGGCATAGAGAGGTCTCCTTCTCCAGAGactgagaaagagaaggagagtcCGGTGGAGCTGACAGAGAGATGCTTTCGAGAGCTTTTAGGGCGAGCGGCCTACGGCAACATCAAGAACGCCGTGAAACCTGTGCTCATGCACCTTGATAACCATTCGCTCTGGGAGAGCAAAACATTTGCAGTGCGCTGCTTTAAAATCATTATGTACTCCATTCAGTCTCAACATTCGCATCTGGTGATTCAACAGCTGTTGGGCCACTTGGATGCCAACAGTAAGAATTCAGCCCGAGTGCGTGCCGGGATAGTGGAGGTGATCTCAGAGGCAGCTGTCATAGAAGCCAGTGGATCCATAGGGCCCACAGTACTGGAAGTGTTCAATACTCTACTGAAGCAGCTCAGACTCAGTGTGGACTACGAGCTTACAGGATCCTACGACTCTTTCGCAAACATGGGCTCCAAGGTCATTAAAGTACACGAGGAGAGACAACTCCAAGAAGCTGTCATCAAAACTATTGGCTCATTTGCAAACACACTTCCCACCTACCAGCGCTCAGAAGTCATGCTGTTCATCATTGGTAAAATTCCCGTGCCAGGCATGTATCCGGCTCTGGGGTCAGCCAACACCGGGGTTGAGGGCAGCAGGATGATCCAGATTATGCTGCTGAAGTCTCTTCTGCAGGTAACAGCAGGATTCCAGTCTACAAACATTTTGACAGCACTTCCCACCTCATTCCTGGACCCGCTCTTGTCCTTCACTCTTATGGAGGACGCAGAGATTCGTCTACTCGTTCTTGACATTCTCATCAGCATCATTGATCGCCATGACAACCGGCACAAATTCTCCCCTGTCAGAATTATCTCAGATATCTCAGTACTGAAGTTGAAAGTAGACAAGTGCTCAAGGCAGGATAACCTGTTCATGAAGAAACACAGCCAGAGGCTGTACCGTCACATTTACCTTGCCTGCAAAGAGGAGAGCAGCGTCCAGCGGCACTTTGAGTCTCTGTATACTCTGCTGGGGTTGGTCTGTGTGGAGCTGGCCAATGAAGAGGTGGTAGTGGACCTGATCCGACTGGCTCTGGCATTACAGGACCTGGCCTTGACTGAAGAGGCTCTTCCTGTATACAGCCGCTGTGCCATCCACGCTCTGTCAGCTGCGTACCTGAACCTCATCAGCCAGCTGACCACTGTGCCCACCTTCTGCCAACACGTCCATGTGGTGATTGAGTCAAGAAAGAAACTTGTTCCTTTCCTGCTGCCAGAGGATGTTCTTGTTGAGAGCTCAAAggTCCCAGAGAAGCTGGAGAAGGTGGAGGGAGAGGTGCTGTTTGTGCAGGCAAAGATAGCAGAGATGCTGGGCGGCAGCGGATACAACACAGAGAGACTGGCCACTTCATACATCCCACAGATCACAGATGAAGACAGATTGTCTAAGAGGAAGAGTATTGGAGACACCATCTCCCTGCAGTTAGAGATGGAGTCTAGAAACAGTCCAGAGAAAGAGCAGAGATCCACAGCAGagcaaataacatttgaaaCTCTTAAACAAGCCATTGACAGCGTGAATGTGGAGGAGCTGGAGAGAGAGCGCAGAAGGCAGGTGGTGGAGAGGTTTCAGACCGCCCCGTTTGAGGAGATAGCAGCCCACTGCGGGGCCAGGGCTTCCCTGTTGCAAAGTAAGCTCAACCAAATCTTCGAAATCACAATCAGGCCTCCTCCGAGTCCGTCTGGCTCTGTCGGGAACGGTCACGGCCGGAGCCGCTCCGTGCCAGTCTATGAAATGAAGTTTCCAGACCTCTGTGTATACTGAGAGACCCAGGAGCCCTAGTCACTACGTACAGCTGTATTCATCGCACTATTATCACTCCTTCTTAATGTCCAGGTGTAACTCTGTTTCTTCTAAACCGTGTTCTCTAGTGTAATATCAGACCTTAGATAAGGCTGTACTTTATCCTGAAGTCTATTTATGccaacaaagacaaacaaaccaAGAGAATTTACCATATGTTGGTTAAATATGCACTTAGTCTAGACGAAAAAGGACCGAATTTATCGACAAATGATCGTATCTTGTCTGATAGCGTAGAGAGCTGAATGAGGTTTTCATGTTTAGGTTCCTGTGTAAGTGTGTACAGTCTGTTGTAATCGGTTTTCTTGTACAAATTAAGAGTAAAGCTGCCTTAAATTTTGTATCTTGAGTTAAGAACATTTGTCCAAGAATCTCCCAAATGTGTTTCCAAAtattcttgttgttttttttccaacttGTGGGTATGAACAATTTAGCTAAATACAAgctttgtttgcatgtttaaatCGTCTCTACATGCTGCAATAAAAGTTGTATTAAAAGCAATAACTACTGAATTTAAACGTCAAAACTCTTTAAGTAGAAGCTGAAGAAATAATACAGCAAATGCTAAGTTTCACATTCAACTCAATGCAGTATTCCAGTCCGAACTGATGGATTAATGACGTTGTGTATAAGTGAAAAGTGAATGTGTTACACTGGCACAAGTGTGCACAGACCTATATCATTATATTCTTATTGATGCAGTTTCTTACGTGAAAGGTTTAATTGCTTAAATCGTTTAGTTTTTCTGGAACATAgtgaattaatattattattagtaaaaatTTCACAGGCAAAAAAAGTCCATCGTCTACTGGCAATGGTGTCACGATGTATAAAGCACAGTTAAGCAGAAATCACTTTCAAAGCGAATTTGCGAAACCAGTTTGAACCCATTGCGAAATCTGCTCGGGGAAATCCTTTGCTCTGATGTGTATTGTATTCCTATTGAAATGACTGTATTTTGCTATATTCTCTTTATAGAGCAGCTTTCCGTTGGCCAAAACAAGCCGCCTCATGGGAAATTCTCATTGCCATAATGTCATTTCGCCCACAGAATTAAAAGGTAAAAGTTCTAGAGGtaaattccattaaaaaaaaaaataaaacccccGCTTGGGGTCTAAAGGGATCGTCTACCTTTTTAACCatgatttgtgttttattttacctCAATTTGTGAACAATTTCAGGTTTACATTGAGATTTCGTTGTCCTGGATTTAAacgcagcactttaaagctcaCTGTGTAAATGTGGTGTATGCTGGAAAATATACTTCATGTTGTGCGAAATTTCATCTTGATGTGTTCCTGTCTAAACTTTATGGTGTGTTATCTGTTGTCCTGTCATATTGTTCCTGGTACCACATAAAAGCGTGGacgtttatgatgtttttagttCATCAAGTCATTTTTCATGTTAacggtattttattttatattcatcttTGGTGAAACCTTGAATTGATTTGcaagcataaaaacaaatggGTTTTATCTTCTCTGTCTATATGGCTATGATGAAATATCCTAGACCGCTTACATGTGAGGTGATTTTGCATGTACGAAATATCAGAGTTTAGTCTTTCCTTGTCAGCTGCTGCTGCATGCACTGGGTGTTTTGTCCGTgattttcccatttttttcatttaagtgaGATCATTACAACACTGTGGACCGTAATAAGTCAACTTAGTTGTGTTTAGATGCCGTCACTGTAAAAGGATGAGACTTcagaactgtgttctgtgaaTGTTTGCCTACATGAAATCATTAAGTGATGTACATATGTGGTGTGAATAACAAGAATATCGATTAAAGACtaattttatgaattcaaa

Function

symbol description
efr3ba Predicted to be involved in protein localization to plasma membrane. Predicted to be active in plasma membrane. Orthologous to human EFR3B (EFR3 homolog B).

NR:

description
PREDICTED: protein EFR3 homolog B-like isoform X6

GO: NA

KEGG:

id description
K21842 EFR3; protein EFR3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043263257.1 True 4671 mRNA 0.44 22 13206002 13227736
XM_043263258.1 False 4669 mRNA 0.44 22 13206002 13227737

Neighbor

gene id symbol gene type direction distance location
prox1a prox1a,LOC107752784,LOC107592773,LOC107697775,LOC107594785,LOC107733138,LOC107674077 coding downstream 166576 13003579 ~ 13039426 (-)
smyd2a smyd2a,LOC107592771,LOC107752785,LOC107697773,LOC107733184,LOC107594786,LOC107674111 coding downstream 218110 12977069 ~ 12987892 (-)
cenpf cenpf,LOC107592772 coding downstream 229076 12962588 ~ 12976926 (-)
kcnk2a LOC107697693,LOC107752820,LOC107674044,LOC107733102,LOC107594834 coding downstream 253434 12933763 ~ 12952568 (-)
cgref1 LOC107697770 coding downstream 278936 12923396 ~ 12927066 (-)
LOC122361854 ect2l,LOC107592784,LOC107752807 coding upstream 42620 13270357 ~ 13278671 (-)
ccdc28a ccdc28a,LOC107752777,LOC107697785,LOC107592783,LOC107733152,LOC107594775 coding upstream 51039 13278776 ~ 13283695 (-)
tmem121aa tmem121a,tmem121,LOC107594772,LOC107674105,LOC107592808,LOC107697696 coding upstream 90674 13318411 ~ 13345591 (-)
tedc1 LOC107752774,LOC107697787,LOC107592785,LOC107733103,LOC107594770,LOC107674045 coding upstream 156803 13384540 ~ 13395619 (-)
dnal1 dnal1 coding upstream 168663 13396400 ~ 13399366 (-)
G120833 NA non-coding downstream 22553 13180074 ~ 13183449 (-)
G120843 NA non-coding downstream 31811 13173948 ~ 13174191 (-)
G120767 NA non-coding downstream 54664 13151008 ~ 13151338 (-)
G120762 NA non-coding downstream 114632 13091080 ~ 13091370 (-)
G120756 NA non-coding downstream 124662 13077801 ~ 13081340 (-)
G120865 LOC107752772,LOC107697781,LOC107733167,LOC107592781,LOC107674095,LOC107594780 non-coding upstream 40840 13268577 ~ 13269372 (-)
G120871 NA non-coding upstream 68533 13296270 ~ 13296536 (-)
G120929 NA non-coding upstream 549988 13777725 ~ 13815014 (-)
G120980 NA non-coding upstream 705683 13933420 ~ 13933685 (-)
G120982 NA non-coding upstream 735856 13963593 ~ 13963870 (-)
LOC122361883 LOC107592775,LOC107752809,LOC100537549,LOC108433935,LOC107733136,LOC107674087 other downstream 5310 13193177 ~ 13200692 (-)
G120660 LOC107752798,LOC107592762,LOC107697764,LOC107733171 other downstream 385334 12817192 ~ 12820668 (-)
LOC122361973 LOC107592804,LOC107697765,LOC107752799,LOC107674033,LOC107733077 other downstream 414133 12663239 ~ 12791869 (-)
lin52 lin52,LOC107594798 other downstream 814454 12381281 ~ 12391548 (-)
evla evla,LOC107719466,LOC107697733,LOC107563375,LOC107594809,LOC107733132,LOC108425620 other downstream 1261274 11915468 ~ 11944728 (-)
kidins220a id2a,id2,kidins220,LOC107579075,LOC107707685,LOC107553286,LOC107655320,LOC107752760 other upstream 753810 13981547 ~ 14040211 (-)
LOC122361652 LOC107679745,LOC107752800,LOC107594718 other upstream 1481754 14709491 ~ 14733577 (-)
myo6b myo6b,LOC107741840,LOC107594692,LOC107679792,LOC107600844,LOC107666253 other upstream 1564449 14792186 ~ 14839813 (-)
ptgr2 ptgr2 other upstream 1783089 15010826 ~ 15026415 (-)
crip1 crip1,LOC106611282,LOC107679815,LOC107594706,LOC107600860 other upstream 1832256 15059993 ~ 15064678 (-)

Expression


Co-expression Network