LOC122362022


Basic Information

Item Value
gene id LOC122362022
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056715.1
NCBI id CM032084.1
chromosome length 22256391
location 18860972 ~ 18864442 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043263267.1
ATACAACACATCAGATGAAGGCAGAAGGAGACTGATACCAGCTGTGGTGAACTGCAGAAAAGCTGTATTTGCCTTCTGTAATCTCACTGGTCAATGCTGTGAAATTTTGTCTTCATctctacaatcatcaaactcCTCACTGAAAGAGCTTGACCTGAGTAACAATAACCTTCAAGATTCAGGAGTGGAGCTCCTCCTGAACAATTCACACTGTCAACTCCACGTACTGAGAGTTGCTTACTGTAATCTTACTGATCAGTGCTGTGAAAGTGTGTCTTCTTCACTACAATCAACAAACTCCTTACTAAGAGAGCTGGACATGAGTAACAACGACCTGCAGAATTCAGGAGtaaagctgctctctgatggactgaagagttcaCATTGTCAACTCAATATACTGAAGTTATCTGGTTGcatggtgacagaggaaggctgttgttatctggcttcagctctgagttcaaacccctcacacctgagagagctggatctgagctacaatcatccagGAAAATCATTAgtcaagctgctctctgatCCAAACTACAGTCTATACAAACTCAACGTGGACTGTGGAGGAACGTTcaggattacagcaggactACAAAAATATGCATGTGATCTCACGCTGGATTTAAACACCACAAACACTCATCTTACTCTGACTGAGAGGAACAGAAGGGTGACGTATGTGAGAGAGAAGCAGGCATACCCTGCTCATCCAGAGAGATTCGATGAGTGCGCTCAGGTTCTGTGTAGAGAGTCTGTccggacgctgttactgggagactga

Function

GO:

id name namespace
GO:0005524 ATP binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043263267.1 True 796 mRNA 0.44 6 18860972 18864442

Neighbor

gene id symbol gene type direction distance location
LOC122362021 NA coding downstream 21732 18837814 ~ 18839240 (-)
LOC122362202 galnt16,LOC107707671,LOC107687852 coding downstream 45869 18794589 ~ 18815103 (-)
numb numb,LOC107687942,LOC107753345 coding downstream 134144 18686027 ~ 18726828 (-)
exd2 LOC107687943,LOC107753346,LOC107758720,LOC107687840 coding downstream 176509 18674126 ~ 18684463 (-)
atp6v1c2 LOC107687954,LOC107753364,LOC107558472,LOC107687850,LOC107589777,LOC107758708 coding downstream 244913 18605141 ~ 18616059 (-)
LOC122361744 galnt16,LOC107707671,LOC107687852 coding upstream 23109 18887551 ~ 18917490 (-)
LOC122361746 vps39,LOC107707670,LOC107572021,LOC107687842,LOC107558491,LOC107687939 coding upstream 57523 18921965 ~ 18938637 (-)
LOC122362028 NA coding upstream 114264 18978706 ~ 18981367 (-)
LOC122361743 NA coding upstream 117059 18981501 ~ 18992880 (-)
nkx2.4a nkx2.4a,nkx2-4,LOC107707661,LOC107688185,LOC107558479,LOC107737279 coding upstream 562271 19426713 ~ 19429509 (-)
G122246 NA non-coding downstream 160717 18698844 ~ 18700255 (-)
G122245 NA non-coding downstream 162145 18696502 ~ 18698827 (-)
G122240 LOC107753347,LOC107687945,LOC107558486,LOC107687860,LOC107758716 non-coding downstream 187031 18669928 ~ 18673941 (-)
G122241 NA non-coding downstream 192961 18667372 ~ 18668011 (-)
LOC122361655 odc1,LOC107687839,LOC107687948,LOC107753348,LOC107758719,LOC107558486,LOC107687945,LOC107753347,LOC107758716,LOC107687860 non-coding downstream 193850 18650479 ~ 18667122 (-)
LOC122361748 NA non-coding upstream 151155 19015597 ~ 19020095 (-)
G122270 NA non-coding upstream 156555 19020997 ~ 19022185 (-)
G122274 NA non-coding upstream 162338 19026780 ~ 19066968 (-)
G122334 NA non-coding upstream 274084 19138526 ~ 19138826 (-)
G122343 insm1,insm1b,LOC107558475,LOC107564444,LOC107756196 non-coding upstream 302939 19167381 ~ 19169489 (-)
LOC122362226 vps39,LOC107707670,LOC107572021,LOC107687842,LOC107558491,LOC107687939,LOC107758712 other downstream 24352 18819663 ~ 18836620 (-)
G122247 NA other downstream 70092 18786882 ~ 18790880 (-)
LOC122361943 NA other downstream 215980 18631257 ~ 18644992 (-)
LOC122361613 NA other downstream 579400 18279458 ~ 18281572 (-)
LOC122361562 otofb,LOC107752720,LOC107701524,LOC107723281,LOC108423539 other downstream 856758 17982051 ~ 18004214 (-)
ralgapa2 ralgapa2,LOC107687934 other upstream 282889 19147331 ~ 19282456 (-)
LOC122362030 cldn20,tfb1m,LOC101886267,LOC107571061,LOC107675320,LOC107573130,LOC107728965,LOC108443299,LOC108269830,LOC107680107,LOC107728964,LOC107675319 other upstream 960017 19824459 ~ 20053139 (-)
LOC122362234 kif26a,kif26ab,LOC107739214,LOC107662598,LOC107732702,LOC107559913,LOC107586892 other upstream 1692281 20556723 ~ 20636159 (-)
aspg aspg,LOC107586863,LOC107739215,LOC107732472,LOC107662599 other upstream 1893274 20757716 ~ 20770229 (-)
nenf nenf,LOC107739254,LOC107664444,LOC107732830,LOC107662615,LOC107586886 other upstream 2050759 20915201 ~ 20916639 (-)

Expression


Co-expression Network