CI01000001_00124107_00131285 (ELOVL4B)


Basic Information

Item Value
gene id CI01000001_00124107_00131285
gene name ELOVL4B
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 122814 ~ 131380 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

Function

symbol description
elovl4b Predicted to enable fatty acid elongase activity. Acts upstream of or within very long-chain fatty acid biosynthetic process. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be integral component of membrane. Predicted to be integral component of endoplasmic reticulum membrane. Is expressed in optic vesicle; pleuroperitoneal region; presumptive neural retina; solid lens vesicle; and visual system. Human ortholog(s) of this gene implicated in corneal dystrophy and spinocerebellar ataxia type 34. Orthologous to human ELOVL4 (ELOVL fatty acid elongase 4).

GO:

id name namespace
GO:0006633 fatty acid biosynthetic process biological_process

KEGG:

id description
K10249 ELOVL4; elongation of very long chain fatty acids protein 4

RNA

RNA id representative length rna type GC content exon number start site end site

Neighbor

gene id symbol gene type direction distance location
CI01000001_00113458_00118362 NA coding downstream 4612 111929 ~ 118447 (-)
CI01000001_00105105_00108304 NA coding downstream 13215 104255 ~ 109844 (-)
CI01000001_00001500_00064341 CDH24 coding downstream 57483 708 ~ 65576 (-)
CI01000001_00192545_00195828 FAM46A.L, FAM46AB, FAM46A, FAM46AA coding upstream 60551 191931 ~ 196831 (-)
CI01000001_00218182_00220017 NA coding upstream 86277 217657 ~ 220116 (-)
CI01000001_00222940_00227735 NA coding upstream 91420 222800 ~ 228007 (-)
CI01000001_00238241_00249437 NA coding upstream 106861 238241 ~ 249437 (-)
CI01000001_00305883_00333574 FYCO1A coding upstream 174111 305491 ~ 333798 (-)
G12846 NA non-coding downstream 24154 98578 ~ 98905 (-)
G12845 NA non-coding downstream 25240 97338 ~ 97819 (-)
G12844 NA non-coding downstream 25861 96898 ~ 97198 (-)
G12842 NA non-coding downstream 28483 94121 ~ 94576 (-)
G12841 NA non-coding downstream 28973 93784 ~ 94086 (-)
CI01000001_00124107_00131285 ELOVL4B non-coding upstream 20234 122814 ~ 131380 (-)
G12856 NA non-coding upstream 22587 153967 ~ 154280 (-)
G12859 NA non-coding upstream 33573 164953 ~ 166160 (-)
G12866 NA non-coding upstream 47395 178775 ~ 179035 (-)
G12868 NA non-coding upstream 53476 184856 ~ 185057 (-)
CI01000001_00362143_00378213 NA other upstream 235862 361614 ~ 378213 (-)
G14104 NA other upstream 1632289 1763669 ~ 1771468 (-)
G14219 NA other upstream 1862830 1994210 ~ 1994898 (-)
G14228 NA other upstream 1924594 2055974 ~ 2056478 (-)
G12877 NA non-coding upstream 49661 202998 ~ 203217 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location