CI01000001_00238241_00249437


Basic Information

Item Value
gene id CI01000001_00238241_00249437
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 238241 ~ 249437 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_00238241_00249437.mRNA
ATGTTTAGACGATGCACTGAATTTTCTAAAAAGAAAAAGGATAAAAGGATGGAGGCCTCGTGTCTGGAACTAGCTCTGGAAGGTGAGCGTCTGTGTAAAGTGGGAGATTACCGTGCGGGCGTCTCCTTTTTTGAGTCGGCCATCCAGGTGGGCACAGAAGACCTGCAGATTTTGAGCGCCATCTACAGTCAGCTGGGAAACGCCTACTTCCACCTGCATGACTACAACAAGGCTCTAGAATATCATCGGCATGACCTGACGCTCACTAGAACTATCAGAGATCAGCTAGGAGAAGCTAAAGCCAGTGGGAACCTTGGAAACACGTTGAAAGTTTTGGGACGCTATGATGAAGCAGCAGTTTGTTGCCAAAGACATCTGGATATTTCCAGGATGCTCCATGATAAGGTGAGACGGACGCTGCAGTTGGCGCGGCAGTTGAAGGACAGGGCCGTGGAAGCTCAGGCCTGCTACAGTCTGGGCAACACCTACACGCTACTGCAGGACTATGAGAGAGCCATAGACTATCACCTCAAACATCTCATCATAGCGCAGGACCTTAAGGACAGCACTTCCAGTAATGTTTTTTCCTTCCTGTATGTGTGCGCTCCTCAGATTGGAGACCGCAGTGGGGAGCTGACAGCCAGAATGAACGTATCTGATCTGCAGTTAGTTTTGGGTCTGAAGCAAAACAATTCAAACCCTAACAGCCCTGCCTTCATCGAGAGTCCGTCCGCTGACAGCAGTCTGCCTGATGGAAGATCCAGAGGAAGCCGTAGACACAGCATGGAGAACATGGAGCTCATGAAACTGACCTCTGACAAAAATGTGGGGCAGGCCTGTGAGGAGACTACAACACCTCAGCAAGTCAAATCACCAACCAAAACTTCCATAGCCAAGACATCTTCCAAAATTTCCTTCATCAATCGCTTCAGGAGCAAAAAACACAGGTTGAATGGTTCAAACTCCAGTCCACCAGCTGAAAATAACAGCAGTAGCAGTAGCCCAACTTCAGCCCCTCCAGACATACAGCACGCTCCAGACACTCTGGGTGAAGACGGCTTTTTTGACCTTCTAAGCCGCTTCCAAGGCAGCCGTATGGATGATCAAAGGTGCTCATTAGAGGACGGCATAAGCCGTGTTCCCGCCCCTTCCTCTCCCCGTGAAACCCCACCTGTAGCCTTGAGGAAACACCTGCTGGCCAGCTCGCAGAGCCGTCGGCTGGACGAGCAGCGGGCCAGTGTGAGCAGTCTTCCGGGTTTCCGGCTGGACCAGCGCCACAGCCAGGATGTTCTCAGCAAACTCATGGCCACGGCCGATAGCAAAGAACCGGATGAAGACTTCTTCGACATGCTGATTAAGTGCCAGGGATCCAGACTGGATGATCAGAGGTGTGCTCCTCCTCCACCCCCCACCAGAGGCCCCACAGTCCCAGACGACGACTTCTTCAGCCTCATCGTTCGCTCCCAGGCCAAACGAATAGATGAGCAGCGA

Function

NR:

description
Pinsa

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_00238241_00249437.mRNA False 1491 mRNA 0.52 10 238241 249437

Neighbor

gene id symbol gene type direction distance location
CI01000001_00222940_00227735 NA coding downstream 10234 222800 ~ 228007 (-)
CI01000001_00218182_00220017 NA coding downstream 18125 217657 ~ 220116 (-)
CI01000001_00192545_00195828 FAM46A.L, FAM46AB, FAM46A, FAM46AA coding downstream 41410 191931 ~ 196831 (-)
CI01000001_00124107_00131285 ELOVL4B coding downstream 106861 122814 ~ 131380 (-)
CI01000001_00113458_00118362 NA coding downstream 119794 111929 ~ 118447 (-)
CI01000001_00305883_00333574 FYCO1A coding upstream 56054 305491 ~ 333798 (-)
CI01000001_00362143_00378213 NA coding upstream 112177 361614 ~ 378213 (-)
CI01000001_00445369_00466166 TMCO4 coding upstream 195803 445240 ~ 466897 (-)
CI01000001_00493196_00498517 OTUD3 coding upstream 243328 492765 ~ 498517 (-)
CI01000001_00500347_00500698 G0S2 coding upstream 250646 500083 ~ 500698 (-)
G12873 NA non-coding downstream 25995 211309 ~ 212246 (-)
G12880 NA non-coding downstream 28883 209149 ~ 209358 (-)
G12878 NA non-coding downstream 34535 203492 ~ 203706 (-)
G12877 NA non-coding downstream 35024 202998 ~ 203217 (-)
G12868 NA non-coding downstream 53184 184856 ~ 185057 (-)
G12920 NA non-coding upstream 28607 278044 ~ 278289 (-)
G12921 NA non-coding upstream 33118 282555 ~ 282782 (-)
G12933 NA non-coding upstream 86288 335725 ~ 336033 (-)
G12896 NA non-coding upstream 109434 358871 ~ 359739 (-)
G12945 NA non-coding upstream 155894 405331 ~ 406159 (-)
G14104 NA other upstream 1514232 1763669 ~ 1771468 (-)
G14219 NA other upstream 1744773 1994210 ~ 1994898 (-)
G14228 NA other upstream 1806537 2055974 ~ 2056478 (-)
CI01000001_02258523_02262621 NA other upstream 2009952 2258442 ~ 2263103 (-)

Expression


Co-expression Network