CI01000001_00839822_00841040


Basic Information

Item Value
gene id CI01000001_00839822_00841040
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 839630 ~ 842421 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_00839822_00841040.mRNA
ATGTGGATTGTGGTTGACAACTTCAGCAAGGTCCACTATAACAACCTTCAAGGGCCTCCTGACCCTGGGAGGGGGTGACCTCTGACCTTATTTGGGCCTCTTTTATGAGGATTTTTTCAAGGCTCTGACCAGATGGCTAAACTATCAAAGGCTTTTTTATGAGAAAAATCTGCAGGCAAGAGTAGAGTAGTATATTTCTCTCATTGTGCGCTCCTGCCTCTGAGATGCCCACTGGAATTTTCAGCGGAAATTGGAACATTGATTGAACATTTGTGCAACATATTAACGTTAAACCTCTTTACACCTTGTTCAGGAAACCAAAGTCTTATATTTCAAACAAAATATAAAATTAATATATATATATAATATTAATAATTATTAGTGCAGTCAAATCGATTAATCACAATTAAAAAAGTTTGTAAATATATACAGTATGTGTATACATACTATATATATATATATATATGTATGTATTTACATATACAAACTTTTGTTAGATGAATCATGATTAATCGATTTGACAGCACTAATAATTATTTATATATATATATTAATTTTATATATAATTGTACATATATAATTATTTATATATATTTATATATACACACAAACTTTTATGTTAGACGTGAGTAATTGTGATTAATCGATTTGACAGCACTAATAATTATTAATAATATATATATAATCATTTTATCTTTAGAAAGTCTTATATTTAAAACAAAATATTCTTGTTAGCCACAAGTACGCTCAAATTATTTCTCAAATTTTATTCTTATAAAAACTAATATAAAAATAAAAAAACATACATCATGTGTGTTCTGGAAAAGTTGTGTCTTCACTCTTACACCTGTGTATTGATATATTTTTAAAGGACGGCATTAAAAGATATTAACGCATGTGGAAACGTACATGATAGTCCACAGAAATCCACAGCGAGAGGATAACTGGTGTTTTTAGGAAGGGGAAAGAGTTGTGTGTCCCCGGGTCGCTATAACTTCCTCGCTCCACATCACTCATGAGGCTCTTTTATGAGAGATGAACTGTGTGGATGGATTGGGTTTCTGAGGGACCACTAGTTTCGCTCAGGCTCCCTTCACTGTCAGCAAACAGCCTGGCTTCAATAAATATGATAATGTTCAAGAACAGGGCTCAGATTTGATCATTATGGATTTATAAACATCGCAGCTAAACAACAGTAAAGACCCCAAGCTGTAATAAAACAACTAGATTCTGAAAAATGTGATGCTGTGGCATTGCTAGGGTATTCTGGGCATTCTGTGTGTTCTGTGAGGTTGCTAGGGTGTCGTTAAATTATTCTGAGTGGTTGCTAGGGTGTCGCTAGGTTGTTCTGGGTGGTCGCTAGGGTGTTCTGTGCTAAAAAATGGTCGGAAGTATAGTGGAAGTTTGTGAATTGTCAGTAGCCAGTAGTCTCTGGCTTTCATTAATAACACTGCTGCAGACTGGTGGATGGCTCTCTCGTCAGGAAATAGTCCACTCGGTTAATGACAGCTGCTGTAAACATTACCAGTTGGGCACCCTCACCACCCCTTGTCTCCTCCTTCCCCAGAGCATGCTTCACTTTTTCCATGTAAAAACTTCAGGAAGAAAAACAACACATGGTAGTAACCTAAGCTGTCCTGCGCTTGGCGTTTTAATGTGTCCATTCCTGTTCTTGATTGCACTCCGAGGTCACCAGGATCTAAAGTCACTGGAAGCAGTTAAAATAATAGGAGCTGACCACATGTTGGAGGTTATGAGATGCGGCCCCCCGACATACAGAGGAGCCGCTGTTGGGAACACTGCTGTTGTGTCTCGCTGACCTGTTTGTTTAAAACTTATACAAATATTTGTGTAAACTGATTTACAGCAAACATTTGATGCAAGTTATTGCTGATATTTGAATACAAATACACAAAAACCCACATAAACTAAGCTCTTTTTCTTTCCATTTTTTAGATGACTCTGCTTCTTTTCGTGTAATGGTGAGTAAACATGTGCATGTAAATATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_00839822_00841040.mRNA True 2011 mRNA 0.36 2 839630 842421

Neighbor

gene id symbol gene type direction distance location
CI01000001_00808831_00814314 SALL4 coding downstream 24989 807938 ~ 814641 (-)
CI01000001_00754687_00806154 ATP9A coding downstream 33088 754565 ~ 806542 (-)
CI01000001_00716122_00741331 NA coding downstream 98010 716103 ~ 741620 (-)
CI01000001_00636063_00642086 KCNG1 coding downstream 197251 636042 ~ 642379 (-)
CI01000001_00580789_00602408 SRC coding downstream 237002 579076 ~ 602628 (-)
CI01000001_00872245_00878013 ZFP64 coding upstream 28459 870806 ~ 878013 (-)
CI01000001_00925612_00928679 NA coding upstream 83019 925440 ~ 928949 (-)
CI01000001_01030701_01030988 NA coding upstream 187833 1030254 ~ 1031164 (-)
CI01000001_01033836_01034518 NA coding upstream 190915 1033336 ~ 1034920 (-)
CI01000001_01056812_01066005 NA coding upstream 214031 1056452 ~ 1066123 (-)
G13009 NA non-coding downstream 10012 829368 ~ 829618 (-)
G12999 NA non-coding downstream 19042 820389 ~ 820588 (-)
G12997 NA non-coding downstream 21503 817787 ~ 818127 (-)
G12907 NA non-coding downstream 128314 614220 ~ 711316 (-)
G12963 NA non-coding downstream 233046 605101 ~ 606584 (-)
G13236 NA non-coding upstream 17818 860239 ~ 860528 (-)
G13262 NA non-coding upstream 73827 916248 ~ 916447 (-)
G13264 NA non-coding upstream 76818 919239 ~ 919520 (-)
G13265 NA non-coding upstream 78494 920915 ~ 921145 (-)
CI01000001_00362143_00378213 NA other downstream 442497 361614 ~ 378213 (-)
CI01000001_00238241_00249437 NA other downstream 582113 238241 ~ 249437 (-)
CI01000001_00124107_00131285 ELOVL4B other downstream 704705 122814 ~ 131380 (-)
G14104 NA other upstream 921248 1763669 ~ 1771468 (-)
G14219 NA other upstream 1151789 1994210 ~ 1994898 (-)
G14228 NA other upstream 1213553 2055974 ~ 2056478 (-)
CI01000001_02258523_02262621 NA other upstream 1416968 2258442 ~ 2263103 (-)
CI01000001_04395469_04399381 FKBP1B.L, FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other upstream 3549893 4392314 ~ 4399804 (-)

Expression


Co-expression Network