G123622


Basic Information

Item Value
gene id G123622
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 1758245 ~ 1759869 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU182662
ttcaaacgtgaaaatgataaatatgaccttaaaaattaaaaactaaaaagaaacgACACCTGTTAGTGCATGCTCTTATTAAGATACTGCACAAACATATTGGCAATCTGTCCGATGTTCTCTGTCGGGTGCATCTTGGTGTAACTGATGAACTGACGTCTGAGTTTCCTCAACTCCACCATGTTCAGACTTCTTGTGAGTTCAATCTTTTCCGTGGCTCCAGGAATGGCAATGAGATCTCCAGGGATgctggtcttctgtgactcaAGAACAGCCTGAGACATAAAACAACCCATATGACGACACACGCTATTGATGGTCTTGCTATGCAAATGCAAACTATAAACGCTCACCTGTAGGCAACGAAACACAAAGAACTTCGAatgctttctatttttataacaGATCACCTAAAAGCGATGGAAAT
>TU182663
AAGACTTTAAAACAGGTTCAAATTTATTGCactcaaaacattaaaatgcttcaaacgtgaaaatgataaatatgaccttaaaaattaaaaactaaaaagaaacgACACCTGTTAGTGCATGCTCTTATTAAGATACTGCACAAACATATTGGCAATCTGTCCGATGTTCTCTGTCGGGTGCATCTTGGTGTAACTGATGAACTGACGTCTGAGTTTCCTCAACTCCACCATGTTCAGACTTCTTGTGAGTTCAATCTTTTCCGTGGCTCCAGGAATGGCAATGAGATCTCCAGGGATgctggtcttctgtgactcaAGAACAGCCTGAGACATAAAACAACCCATATGACGACACACGCTATTGATGGTCTTGCTATGCAAATGCAAACTATAAACGCTCACCTGTAGGCAACGAAACACAAAGAACTTCGAatgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU182662 False 427 lncRNA 0.40 2 1758294 1759869
TU182663 True 436 lncRNA 0.40 2 1758245 1759829

Neighbor

gene id symbol gene type direction distance location
ch25hl1.1 ch25hl1.1,LOC107725732,LOC107567886,LOC107691148,LOC107736627 coding upstream 1560 1755660 ~ 1756685 (+)
si:dkey-24l11.2 si:dkey-24l11.2,LOC107725742,LOC107567892,LOC107691129,LOC107715195,LOC107562119 coding upstream 3347 1747275 ~ 1754898 (+)
pstpip1a pstpip1a,LOC107691132,LOC107715239,LOC107562121,LOC107690351,LOC107567896,LOC107725740,LOC108435346 coding upstream 21862 1726239 ~ 1736383 (+)
rcn2 rcn2,LOC107725741,LOC107691133,LOC107690352,LOC107562116,LOC107567882 coding upstream 32298 1723622 ~ 1725947 (+)
c18h11orf58 zgc:56106,LOC107746577,LOC107554484,LOC107554557,LOC107690399,LOC107715205 coding upstream 143523 1612601 ~ 1614722 (+)
slc28a1 slc28a1,LOC107715236,LOC107690357,LOC107562130,LOC107709801,LOC107691146,LOC107567897 coding downstream 18744 1778613 ~ 1789240 (+)
malt3 LOC107690360,LOC107709807,LOC107691126 coding downstream 42492 1802361 ~ 1815297 (+)
LOC122323046 frmd5,LOC107562133,LOC570903,LOC108435336,LOC107556247 coding downstream 56533 1816402 ~ 1907583 (+)
ankrd34c ankrd34c,LOC107715204,LOC107691151,LOC107551450,LOC107690404,LOC107556256,LOC107714779 coding downstream 255203 2015072 ~ 2020057 (+)
idh2 idh2,LOC107714782,LOC107691122,LOC107715227,LOC106514339 coding downstream 262801 2022670 ~ 2034070 (+)
G123576 NA non-coding upstream 19113 1693116 ~ 1739132 (+)
G123599 NA non-coding upstream 138820 1616143 ~ 1619425 (+)
G123587 NA non-coding upstream 167958 1588754 ~ 1590287 (+)
G123527 NA non-coding upstream 247605 1502566 ~ 1510640 (+)
G123507 NA non-coding upstream 354273 1401096 ~ 1403972 (+)
G123642 NA non-coding downstream 99139 1859008 ~ 1918466 (+)
G123643 NA non-coding downstream 159968 1919837 ~ 1920891 (+)
LOC122323174 NA non-coding downstream 294651 2054520 ~ 2061225 (+)
LOC122323220 NA non-coding downstream 562720 2322589 ~ 2331573 (+)
G123860 NA non-coding downstream 578353 2338222 ~ 2403970 (+)
G123568 NA other upstream 186314 1565426 ~ 1571931 (+)
tmem123 NA other upstream 703510 1045194 ~ 1054735 (+)
LOC122362993 LOC107758246,LOC107662138,LOC107657475,LOC107757244 other upstream 934570 814751 ~ 823675 (+)
G123243 NA other upstream 1649413 108369 ~ 108832 (+)
G123664 NA other downstream 241917 2001786 ~ 2002290 (+)
LOC122363059 LOC107714787,LOC107556260,LOC107691117,LOC107551460,LOC565819,LOC107715220,LOC107690391 other downstream 447330 2207199 ~ 2240260 (+)
plin1 plin1,LOC107549017,LOC107715593,LOC107577193 other downstream 541889 2301758 ~ 2319140 (+)
chd2 chd2,LOC107690375,LOC107715217,LOC107693036,LOC107715589 other downstream 650864 2410733 ~ 2461790 (+)
tmem170a tmem170a,LOC107596918,LOC107583727 other downstream 1752088 3511957 ~ 3554690 (+)

Expression


Co-expression Network