plin1 (plin1,LOC107549017,LOC107715593,LOC107577193)


Basic Information

Item Value
gene id plin1
gene name plin1,LOC107549017,LOC107715593,LOC107577193
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 2301758 ~ 2319140 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU183022
TCTGTTTAAAGGTCTAGAGATGGTTTTAACAtactttttagtcatttttttttcttcaggatgCTGGTAGCTCTAAATCAGGCATCCCAAATTATggtaaacaagaaaaaatggttcagCGGCTGATTGAAGACTACTGGAGATGGCGTCTGAGAAAAAGGACACCGTTGATGTTTTGAAGGAACAGaATGTACTCCTTCGAATCCGCAATCTTCGATCTGTGAGTTCCGCTCTGGAATCCATTGGGAAGACATACATCCATACGAAGCAGTCTCATCCCATTATAACCTCTGTGTGTGAGATGTATGAGAAGGGTGTAAGTACGGCTGGCAGCTTGGCTGTATGGAGCATTCAGCCTGCCCTCCATGTGCTGGAGCCTCAGCTTGTAGCAGCCAACTCATTGGCCTGCAGAGGACTGGACCACCTGGAGGAGAAGGTTCCAGCCTTGCAGTATCCACCTGAAGAGCTAACAGCAAGCATCAAGGAGC
>XM_043216908.1
caaaaaaaaagacaaaaacacaataaaattactTCAACTattgaaaagagaaaatatcagAATAATATGTAATTGCTGTAAaagctgatgatacactgggcaaCATTTAGAGCAATGTTGCCAGGCAACTTTAAGCAACAGGGGCCTCAAGACTGATCTAAATGATCTAGATAGTAATCTATTACCCATGAAAAGTGCCCAAGcatcattgttaaaaaaaacaaaacaaaaaaaaaaacacatcataaCACTGCTATGAATACACAACATAGcattcacacatgcacacgtcTCCTCTTTTTGTGAACAGGAAAAAGTAAGATGAAAGCCAAAACAGAAAACTCTCATATTTTCAATGTTGAAGTAGCTAGAGCTGGAAAAATTCTGACATCTGCTGGCGATGATTATATGGCGAGAGTAACAGGGGCTTGCACAACGCTAACATCTAGTGGTCGTAGATGTTATTGCCTCACAAAACTGACAACAGCGTGCAACGAGTGAAAGACCGCTGAGAAGCAGCTAATAGTAACCTGGTAGCTTGAACTTAACATGCTTAACAAGCTGCATGCATGTTTACGTGAAATGTCGCCTCAGTGTCTCATAAGAGCATTTCAGCCATATTGCTGACAGCTGCTATCAAACTAGACCACTGTGTGCCatgctaaaaacaaacagacaaaaaaacagctaCATTTAATATGGTTTGCTTATCAGGCAATAAGTTGTTAACTGTTTTCCTGCTGGTCTAGCTGCAGGAACCCAACTTGGTCTGTTTAAAGGTCTAGAGATGGTTTTAACAtactttttagtcatttttttttcttcaggatgCTGGTAGCTCTAAATCAGGCATCCCAAATTATggtaaacaagaaaaaatggttcagCGGCTGATTGAAGACTACTGGAGATGGCGTCTGAGAAAAAGGACACCGTTGATGTTTTGAAGGAACAGaATGTACTCCTTCGAATCCGCAATCTTCGATCTGTGAGTTCCGCTCTGGAATCCATTGGGAAGACATACATCCATACGAAGCAGTCTCATCCCATTATAACCTCTGTGTGTGAGATGTATGAGAAGGGTGTAAGTACGGCTGGCAGCTTGGCTGTATGGAGCATTCAGCCTGCCCTCCATGTGCTGGAGCCTCAGCTTGTAGCAGCCAACTCATTGGCCTGCAGAGGACTGGACCACCTGGAGGAGAAGGTTCCAGCCTTGCAGTATCCACCTGAAGAGCTAACAGCAAGCATCAAGGAGCTGGTGTCATCAACTTTGGAAACTGCCAAAGATAGTGTTTCCTGTCCAATCAGACAGACCTCTAATGTTGTATTGGACAAGGTATCTACTTGGTACCAGCAGAGTAAGAATGCCTTAAGTGACGgcatatgttatgtttttaacagCAAGCTTGTCTGCCTGGCTGAGCAGAGAGCTGACAGGGCTCTAAGTCTGATGGAGAACCTAGTCGACTTCGTACTTCCTGCATCTTCAACTGAGACAGAGGATGATGGGAGTATGGGAGAGCAGGACCCTGATGTTGGAACCTCTGGCCCAAAACCCAGCTTCAGCAGGCTGGGAGCACTGGCCGGCACCATTTGCAGACGGGCATTTGAGAAGACAGCTGCACAACTACAGCGCTCTAAACGTCAAGGTCAGGCACTGGTCACACAGATCCCTGGCGTGAGTCCCCTGAGTAATGGACTGCCGAGGCTGGTCAGTGGATTAGGGCAGCAGTTATTGAAGATCTATGAGTCTGTGGTGGCTAATGTGAAAAAACCCCATCAAACCAGCTTCAACCTGGCTAAGGATGGAGTCAGCCTTGTCCTGCGGTCCTTTGGCATAGTCAGGGAGAGAGCACTGCACAACCTTTCTTATTATGGGCTGATTCCTAGGCGATCTTCCAAGCCAGAAGGAGGATCCCAAAAGGCGGAAAACGATAGATCAAAAGAATGTTTGAGTTGCACTCTGGTGCTGGAGACTACTGTAGGAGACCACATGCACAGTCCCAGTGGCAGTCCTCAAAAGCAGCCCCTTAAGGTTACAGAGCTCAAGGAGATATCAGAGGAGACCCGTCAACTGAAGAAGAAGGTCATGAAACAGATTCCTATACAGCAGAAAGTAGTTCTTGGTGGCAGCAACAAGAAAGTATCCAACCACAGATCCCAGAGGAAGAGTCTGACAGATTGCACCCAGATCTACTCCTCCTCATCTTCTTACATTCGTACAgtgcaaaacagcagaaatgCCTCCCCTACTGCAGAATGACAATAGAAGAACAGTCAGAGTGGGATGCGGGTTTCATTATTTATCCTGCATATCCGTCATGTTCATTTAAAGCATTATGCAAAGCTGTCATGGGTCATGATTTCTAAAGTGCTGGCAGAGATTCCGCAATCGGTGACCTACATATAGCTATGCATTTGAGGCTCTGGAtcgtgtttttccattttatttcccATTATAAAGTTATTAAGTTAATTTGCTGCCTGAAAAACATTATCTTATcactgttaaaaacagttgcgctgctaaaaggaatagttcacaaaaaaaatgaagattctgGCTGTtctgggtcaccactgacttccgcactattttttttcctgctatgGAAGTAAATGGTGACCAGAACCatctggttacaaacttttttcaagaTGTATTCCTTTGTGTACGGCAGAACAAACAGAttaatacagatttggaacaacttgaagGTGAGtgatgacagaagtttcatttttgggtgaactattcctttaatatttttctgaaaacagtGATGCATTGTTTTCAGTATTCcttgataaatataaagttcaaaagaacatcatcaccagtgtttatttgaaaccaatattttgtaacattataaatgtctttaccatCGTTATagaatcaatttaatgcatcctagcaaaataaaaatgatttactttaaaaaccctactgaccccaaacttttgatcaCTAGTGT
>XM_043216909.1
caaaaaaaaagacaaaaacacaataaaattactTCAACTattgaaaagagaaaatatcagAATAATATGTAATTGCTGTAAaagctgatgatacactgggcaaCATTTAGAGCAATGTTGCCAGGCAACTTTAAGCAACAGGGGCCTCAAGACTGATCTAAATGATCTAGATAGTAATCTATTACCCATGAAAAGTGCCCAAGcatcattgttaaaaaaaacaaaacaaaaaaaaaaacacatcataaCACTGCTATGAATACACAACATAGcattcacacatgcacacgtcTCCTCTTTTTGTGAACAGGAAAAAGTAAGATGAAAGCCAAAACAGAAAACTCTCATATTTTCAATGTTGAAGTAGCTAGAGCTGGAAAAATTCTGACATCTGCTGGCGATGATTATATGGCGAGAGTAACAGGGGCTTGCACAACGCTAACATCTAGTGGTCGTAGATGTTATTGCCTCACAAAACTGACAACAGCGTGCAACGAGTGAAAGACCGCTGAGAAGCAGCTAATAGTAACCTGGTAGCTTGAACTTAACATGCTTAACAAGCTGCATGCATGTTTACGTGAAATGTCGCCTCAGTGTCTCATAAGAGCATTTCAGCCATATTGCTGACAGCTGCTATCAAACTAGACCACTGTGTGCCatgctaaaaacaaacagacaaaaaaacagctaCATTTAATATGGTTTGCTTATCAGGCAATAAGTTGTTAACTGTTTTCCTGCTGGTCTAGCTGCAGGAACCCAACTTGGTCTGTTTAAAGGTCTAGAGATGGTTTTAACAtactttttagtcatttttttttcttcaggatgCTGGTAGCTCTAAATCAGGCATCCCAAATTATggtaaacaagaaaaaatggttcagCGGCTGATTGAAGACTACTGGAGATGGCGTCTGAGAAAAAGGACACCGTTGATGTTTTGAAGGAACAGaATGTACTCCTTCGAATCCGCAATCTTCGATCTGTGAGTTCCGCTCTGGAATCCATTGGGAAGACATACATCCATACGAAGCAGTCTCATCCCATTATAACCTCTGTGTGTGAGATGTATGAGAAGGGTGTAAGTACGGCTGGCAGCTTGGCTGTATGGAGCATTCAGCCTGCCCTCCATGTGCTGGAGCCTCAGCTTGTAGCAGCCAACTCATTGGCCTGCAGAGGACTGGACCACCTGGAGGAGAAGGTTCCAGCCTTGCAGTATCCACCTGAAGAGCTAACAGCAAGCATCAAGGAGCTGGTGTCATCAACTTTGGAAACTGCCAAAGATAGTGTTTCCTGTCCAATCAGACAGACCTCTAATGTTGTATTGGACAAGAGAGCTGACAGGGCTCTAAGTCTGATGGAGAACCTAGTCGACTTCGTACTTCCTGCATCTTCAACTGAGACAGAGGATGATGGGAGTATGGGAGAGCAGGACCCTGATGTTGGAACCTCTGGCCCAAAACCCAGCTTCAGCAGGCTGGGAGCACTGGCCGGCACCATTTGCAGACGGGCATTTGAGAAGACAGCTGCACAACTACAGCGCTCTAAACGTCAAGGTCAGGCACTGGTCACACAGATCCCTGGCGTGAGTCCCCTGAGTAATGGACTGCCGAGGCTGGTCAGTGGATTAGGGCAGCAGTTATTGAAGATCTATGAGTCTGTGGTGGCTAATGTGAAAAAACCCCATCAAACCAGCTTCAACCTGGCTAAGGATGGAGTCAGCCTTGTCCTGCGGTCCTTTGGCATAGTCAGGGAGAGAGCACTGCACAACCTTTCTTATTATGGGCTGATTCCTAGGCGATCTTCCAAGCCAGAAGGAGGATCCCAAAAGGCGGAAAACGATAGATCAAAAGAATGTTTGAGTTGCACTCTGGTGCTGGAGACTACTGTAGGAGACCACATGCACAGTCCCAGTGGCAGTCCTCAAAAGCAGCCCCTTAAGGTTACAGAGCTCAAGGAGATATCAGAGGAGACCCGTCAACTGAAGAAGAAGGTCATGAAACAGATTCCTATACAGCAGAAAGTAGTTCTTGGTGGCAGCAACAAGAAAGTATCCAACCACAGATCCCAGAGGAAGAGTCTGACAGATTGCACCCAGATCTACTCCTCCTCATCTTCTTACATTCGTACAgtgcaaaacagcagaaatgCCTCCCCTACTGCAGAATGACAATAGAAGAACAGTCAGAGTGGGATGCGGGTTTCATTATTTATCCTGCATATCCGTCATGTTCATTTAAAGCATTATGCAAAGCTGTCATGGGTCATGATTTCTAAAGTGCTGGCAGAGATTCCGCAATCGGTGACCTACATATAGCTATGCATTTGAGGCTCTGGAtcgtgtttttccattttatttcccATTATAAAGTTATTAAGTTAATTTGCTGCCTGAAAAACATTATCTTATcactgttaaaaacagttgcgctgctaaaaggaatagttcacaaaaaaaatgaagattctgGCTGTtctgggtcaccactgacttccgcactattttttttcctgctatgGAAGTAAATGGTGACCAGAACCatctggttacaaacttttttcaagaTGTATTCCTTTGTGTACGGCAGAACAAACAGAttaatacagatttggaacaacttgaagGTGAGtgatgacagaagtttcatttttgggtgaactattcctttaatatttttctgaaaacagtGATGCATTGTTTTCAGTATTCcttgataaatataaagttcaaaagaacatcatcaccagtgtttatttgaaaccaatattttgtaacattataaatgtctttaccatCGTTATagaatcaatttaatgcatcctagcaaaataaaaatgatttactttaaaaaccctactgaccccaaacttttgatcaCTAGTGT

Function

symbol description
plin1 Predicted to be involved in lipid storage and positive regulation of sequestering of triglyceride. Predicted to be active in cytosol and lipid droplet. Human ortholog(s) of this gene implicated in familial partial lipodystrophy type 4 and obesity. Orthologous to human PLIN1 (perilipin 1).

NR:

description
perilipin-1 isoform X2

GO: NA

KEGG:

id description
K08768 PLIN1; perilipin-1

RNA

RNA id representative length rna type GC content exon number start site end site
TU183022 False 488 TUCP 0.46 5 2302526 2305578
XM_043216908.1 True 2978 mRNA 0.42 8 2301758 2319140
XM_043216909.1 False 2888 mRNA 0.42 9 2301758 2319140

Neighbor

gene id symbol gene type direction distance location
zgc:162879 zgc:162879,LOC107556259,LOC107691119,LOC107715222,LOC107690369 coding upstream 134467 2159316 ~ 2167291 (+)
sema4ba sema4ba,LOC107714785,LOC107556264,LOC107691120,LOC107715225,LOC107551463,LOC107690368 coding upstream 146255 2095553 ~ 2155503 (+)
idh2 idh2,LOC107714782,LOC107691122,LOC107715227,LOC106514339 coding upstream 267688 2022670 ~ 2034070 (+)
ankrd34c ankrd34c,LOC107715204,LOC107691151,LOC107551450,LOC107690404,LOC107556256,LOC107714779 coding upstream 281701 2015072 ~ 2020057 (+)
LOC122323046 frmd5,LOC107562133,LOC570903,LOC108435336,LOC107556247 coding upstream 394175 1816402 ~ 1907583 (+)
slco3a1a slco3a1,LOC107693030,LOC107601651,LOC107690372 coding downstream 21230 2340370 ~ 2392967 (+)
st8sia2 st8sia2,LOC107693033,LOC107715201,LOC107690408,LOC107549020 coding downstream 69948 2389088 ~ 2400009 (+)
nr2f2 nr2f2,LOC107549018,LOC107690378,LOC107601645,LOC107715214 coding downstream 526903 2846043 ~ 2853173 (+)
hsf4 hsf4,LOC107596914,LOC107715602,LOC107660759,LOC107690412,LOC107583721 coding downstream 1052946 3372086 ~ 3380670 (+)
nudt21 nudt21,LOC107660760,LOC107690386,LOC107721012 coding downstream 1061882 3381022 ~ 3383654 (+)
LOC122323174 NA non-coding upstream 240533 2054520 ~ 2061225 (+)
G123643 NA non-coding upstream 380867 1919837 ~ 1920891 (+)
G123642 NA non-coding upstream 383292 1859008 ~ 1918466 (+)
G123622 NA non-coding upstream 541889 1758245 ~ 1759869 (+)
G123576 NA non-coding upstream 562626 1693116 ~ 1739132 (+)
LOC122323220 NA non-coding downstream 3449 2322589 ~ 2331573 (+)
G123860 NA non-coding downstream 19082 2338222 ~ 2403970 (+)
G123861 NA non-coding downstream 63760 2382900 ~ 2404924 (+)
LOC122322992 NA non-coding downstream 120897 2440037 ~ 2512970 (+)
G123868 rgma,LOC107690376,LOC107715612,LOC107715216,LOC107693037 non-coding downstream 126461 2445601 ~ 2449435 (+)
LOC122363059 LOC107714787,LOC107556260,LOC107691117,LOC107551460,LOC565819,LOC107715220,LOC107690391 other upstream 61498 2207199 ~ 2240260 (+)
G123664 NA other upstream 299468 2001786 ~ 2002290 (+)
G123568 NA other upstream 729827 1565426 ~ 1571931 (+)
tmem123 NA other upstream 1247023 1045194 ~ 1054735 (+)
LOC122362993 LOC107758246,LOC107662138,LOC107657475,LOC107757244 other upstream 1478083 814751 ~ 823675 (+)
chd2 chd2,LOC107690375,LOC107715217,LOC107693036,LOC107715589 other downstream 91593 2410733 ~ 2461790 (+)
tmem170a tmem170a,LOC107596918,LOC107583727 other downstream 1192817 3511957 ~ 3554690 (+)
nrn1la LOC107726468,LOC107694939,LOC107583849,LOC107596927,LOC107733575,LOC107672183 other downstream 1400748 3719888 ~ 3743756 (+)
LOC122322928 megf11,LOC107596974,LOC107686294,LOC107672222 other downstream 2440488 4759628 ~ 4795836 (+)
G124548 NA other downstream 2752505 5071645 ~ 5110633 (+)

Expression


Co-expression Network