CI01000001_01293807_01304836 (CBLN4)


Basic Information

Item Value
gene id CI01000001_01293807_01304836
gene name CBLN4
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 1293698 ~ 1304836 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_01293807_01304836.mRNA
AAGTGTAACATTGGGAAAGTGGTGAGAGGTGCTGAGAGGAAAATGAAAAACATTATGAAGGTGGATATTGAAAAATCATCTGACGTTACGCAACATATCAGTCGTCACAGTGAGTTCACGGAGTCGGGCGTCATTAAGGGTGTGCGCGCGCTCATAGAAGTGTCTGTTGGTCGAGAGAGAGCGAGGGGAACGTCCACAGATGTGTTAAGGGGATATAAGGTTGCTGCATCCACCTACGCGCATTTGGTGATTTGTAAATCAGCAGCTGGTGTCCGGACGGATGTTTGGCGTAAACGAGCACGAACACGGAGCAGAAGCGAAGTGACGGGATCGGGAGAGCCGTTTGGATTTTGGCTACATTGGAGATCGTTCATCATGGTGACCATAAAGCCCTTTAATAAGGCGTTTTTCGACTGCGTGGCTCTTTTGTTCTGCCTGGCCGTCATGTTTGAGTTCGCTTTGGCTCAAAACGACACGGAACCCATCGTCCTGGAGGGCAAATGTCTGGTGGTTTGTGACTCGAACCCCGCCGACTGGAAGAGCTCGTCCTCGCCGCTTGGCATCTCCGTGCGCGCCGCCAACTCCAAAGTGGCTTTTTCTGCGGTGAGAAGCAACAACCACGAGCCCTCTGAGATGAGCAATAAAACGAGAATCATATATTTTGACCAGGTTCTTGTCAACATAGGAAACTATTTCACGCTGGAATCCGTCTTTCTTTGTCCCCGGAAAGGAGTCTACAGCTTTAACTTCCACGTTATTAAAGTGTACCAGAGCCAGACTATACAAGTGAATTTAATGCTGAATGGAAAACCAGTCATCTCTGCCTTTGCCGGTGACAAAGATGTCACACGTGAGGCTGCCACCAATGGAGTCCTCCTGCACCTCAACAAAGAAGACAAGGTTTATCTGAAACTGGAGAAGGGGAATCTGTTGTCATTGTGTAACCAGCCCTTCAGCATCAATTGGAGGCCCCCAAATGGAATCACAATTCCAGACATTCATTCAGCTGTTGTTTGCGGACTACTGGAAAATGCGTCAGTGACGGTGAATCTGGAGAGACGACATCTACTTCAGTGCAATATCACTTTCTGCTAAGTCGTTCTTCATAGATCCAGGGTTCAACACATCATGTCAGACTGTTTGTTCATTTCGTTCGTATGTTTTTAGCGTGTGGTTTTAGGTGACATGAGGGATCCTGATTAAA

Function

symbol description
cbln4 Orthologous to human CBLN4 (cerebellin 4 precursor).

GO:

id name namespace
GO:0005615 extracellular space cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_01293807_01304836.mRNA True 1204 mRNA 0.48 6 1293698 1304836

Neighbor

gene id symbol gene type direction distance location
CI01000001_01199556_01205086 NA coding downstream 88612 1199498 ~ 1205086 (-)
CI01000001_01158947_01164142 ZNF217 coding downstream 128547 1158398 ~ 1165151 (-)
CI01000001_01068423_01079855 NA coding downstream 213081 1067640 ~ 1080617 (-)
CI01000001_01056812_01066005 NA coding downstream 227575 1056452 ~ 1066123 (-)
CI01000001_01033836_01034518 NA coding downstream 259023 1033336 ~ 1034920 (-)
CI01000001_01313263_01351961 NA coding upstream 7851 1312687 ~ 1352235 (-)
CI01000001_01368611_01369774 IRX7 coding upstream 63569 1368405 ~ 1369799 (-)
CI01000001_01377825_01378304 NA coding upstream 71956 1376792 ~ 1378304 (-)
CI01000001_01421483_01453330 NA coding upstream 116094 1420930 ~ 1453330 (-)
CI01000001_01476453_01500640 NA coding upstream 170698 1475534 ~ 1500968 (-)
G13415 NA non-coding downstream 34805 1258524 ~ 1258893 (-)
G13410 NA non-coding downstream 40405 1252995 ~ 1253293 (-)
G13409 NA non-coding downstream 41350 1252125 ~ 1252348 (-)
G13361 NA non-coding downstream 58902 1188474 ~ 1234796 (-)
G13364 NA non-coding downstream 78188 1186160 ~ 1215510 (-)
G13618 NA non-coding upstream 106051 1410887 ~ 1411156 (-)
G13619 NA non-coding upstream 106608 1411444 ~ 1411651 (-)
G13582 NA non-coding upstream 251407 1556243 ~ 1576197 (-)
G13670 NA non-coding upstream 343226 1648062 ~ 1648288 (-)
G13671 NA non-coding upstream 344356 1649192 ~ 1649430 (-)
CI01000001_00362143_00378213 NA other downstream 896565 361614 ~ 378213 (-)
CI01000001_00238241_00249437 NA other downstream 1036181 238241 ~ 249437 (-)
CI01000001_00124107_00131285 ELOVL4B other downstream 1158773 122814 ~ 131380 (-)
G14104 NA other upstream 458833 1763669 ~ 1771468 (-)
G14219 NA other upstream 689374 1994210 ~ 1994898 (-)
G14228 NA other upstream 751138 2055974 ~ 2056478 (-)
CI01000001_02258523_02262621 NA other upstream 954553 2258442 ~ 2263103 (-)
CI01000001_04395469_04399381 FKBP1B.L, FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other upstream 3087478 4392314 ~ 4399804 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_021908 cbln4 coding NC_007134.7 CM002907.2 37955041 ~ 37974323 (+)