G124425


Basic Information

Item Value
gene id G124425
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 4476547 ~ 4477879 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU183828
AGGGGGGTGAAAAATGCTACAGAGACACAGCTGAGAAGAACAATTTATTGACTGACatgtttcaaagaaaaagaaaaatgttttaaaaaaaacaaaaaacaaaaaaaaaaaatatgatgcagCATTTCATCTATACATGACCAGGTCCTGTTTATCAATAAtacataatctaaaaaaaaaatgtatcgaTAAAATGGGAGCAATTACCAGCAGCTTTCTGAAGAGACTTAATCTTTGTCTGGAATACCAGACAGATCTTTAAAGTACTGAATTGATATTGACTGATGTTCTGGCCACTAAGATCTTCCACAAGACtgatgaatgaattaaaaaaaaataataaaaataaaatgaagatcAGAAAGTAGCACCAAACATCCTTGCTGGCTTCACCCTCAGACAGCTTTGCGATGATATTCCGGAGGTGCAACCTCATAGTCGCTTGCACTGAACAAAGTCGATGAATTCTTCACCAAATACCTTTAAAAAATCTTGTAGGTAGCTGAGAAGCAGGGCCAGACTCTTCTCATCCAGAGGTGTGTAGGCCAGCATTGCTCCAATTCTCACTGTCAGAGGGCAAAAAAAGCGGCTATAAATCACCAAATTACTATTAATGTCAATTCATACATTCTCTTTGATACAGACATTGATTAACGCCCCCCCACCCCACATTTAAGTTCATACCAAAAAGCCTCAGCAGGTGTGGCGCTCCGTAGATCTTTGACATGGATGTATCTGGATGGTTTGCTAGGATCTCCGCATACTGTGGCCTCTCAAACTTGTAGAGGAGCTGAGTGCCCAACATGACATTAAAGTACTCGCGGATTCCAGCAACCACCTCATTTACGGCAAATTCCCTGAGTTAAGGACAAGTATCTGTTTAGAAAATCTCTCCATGACTTATTTGTGAATTTCTACAACGGGGATGGTTtccacaacaaacaaataatttgtgCAACGGTAGTTTCAACTAACTGGACAAGAGAATGGTTTTTACACATGGCACACAAACGTACTTGTTATCAGAGTTTCCTCTTGATTTCTTGTAAGTTGCATAGTCCTCAAGGACATCATCTACATTCTTTTTTGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU183828 True 1091 lncRNA 0.38 2 4476547 4477879

Neighbor

gene id symbol gene type direction distance location
kif23 kif23,LOC107708211,LOC107672274,LOC107686310 coding upstream 174669 4292237 ~ 4301878 (+)
paqr5a paqr5a,LOC107686313,LOC107596958,LOC107738698 coding upstream 185086 4287447 ~ 4291461 (+)
LOC122363152 fam180b,LOC107596959,LOC107738700,LOC107708214 coding upstream 194610 4280090 ~ 4281937 (+)
ighmbp2 ighmbp2,LOC107738695,LOC107596955,LOC107708224,LOC107583861,LOC107672301 coding upstream 212836 4257020 ~ 4263711 (+)
dennd11 LOC107738692,LOC107708228,LOC107686315,LOC107672298,LOC107583753 coding upstream 223255 4246548 ~ 4253292 (+)
aagab aagab,LOC107596965,LOC107686304,LOC107738712,LOC107718310,LOC107672261,LOC107583761 coding downstream 107310 4585189 ~ 4588702 (+)
snapc5 snapc5,LOC107672220,LOC107596973,LOC107686356,LOC107583772 coding downstream 245160 4723039 ~ 4725612 (+)
lctlb lctlb,lctl,LOC107596968,LOC107686298,LOC107738718 coding downstream 248571 4726450 ~ 4735467 (+)
rpl4 rpl4,LOC107686296,LOC107596972,LOC107718306,LOC107583768,LOC107672218 coding downstream 262264 4740143 ~ 4743910 (+)
LOC122323235 NA coding downstream 262989 4740868 ~ 4740965 (+)
G124427 NA non-coding upstream 14423 4461845 ~ 4462124 (+)
G124295 NA non-coding upstream 292896 4182733 ~ 4183651 (+)
G124294 cftr,LOC107583749,LOC107738689,LOC107596947,LOC107672176,LOC107708216 non-coding upstream 294156 4181385 ~ 4182391 (+)
G124293 cftr,LOC107596947,LOC107738689,LOC107708216,LOC107672176,LOC107583749 non-coding upstream 295258 4180426 ~ 4181289 (+)
G124292 NA non-coding upstream 297191 4179040 ~ 4179356 (+)
LOC122323045 NA non-coding downstream 210155 4688034 ~ 4691944 (+)
G124497 NA non-coding downstream 266881 4744760 ~ 4745307 (+)
G124498 NA non-coding downstream 267724 4745603 ~ 4745835 (+)
G124499 NA non-coding downstream 268626 4746505 ~ 4747183 (+)
G124501 map2k1,LOC107672217,LOC107583767,LOC107686295,LOC107596971,LOC106592363 non-coding downstream 269422 4747301 ~ 4748814 (+)
nrn1la LOC107726468,LOC107694939,LOC107583849,LOC107596927,LOC107733575,LOC107672183 other upstream 732791 3719888 ~ 3743756 (+)
tmem170a tmem170a,LOC107596918,LOC107583727 other upstream 921857 3511957 ~ 3554690 (+)
chd2 chd2,LOC107690375,LOC107715217,LOC107693036,LOC107715589 other upstream 2014757 2410733 ~ 2461790 (+)
plin1 plin1,LOC107549017,LOC107715593,LOC107577193 other upstream 2157407 2301758 ~ 2319140 (+)
LOC122363059 LOC107714787,LOC107556260,LOC107691117,LOC107551460,LOC565819,LOC107715220,LOC107690391 other upstream 2236287 2207199 ~ 2240260 (+)
LOC122322928 megf11,LOC107596974,LOC107686294,LOC107672222 other downstream 281749 4759628 ~ 4795836 (+)
G124548 NA other downstream 593766 5071645 ~ 5110633 (+)
G124553 NA other downstream 661611 5139490 ~ 5140671 (+)
G124577 NA other downstream 747929 5225808 ~ 5226057 (+)
G124580 NA other downstream 750684 5228563 ~ 5229946 (+)

Expression


Co-expression Network