G124500


Basic Information

Item Value
gene id G124500
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 4749395 ~ 4749694 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU183917
CCTGGTTACAGCAGTATTCTTCATCATAACATACCTTCCTGGCCATGATGAAGCCCGAGGGTCTGTGTAAGACCTTGAAGACCACTCCTCCGTTGCCTGCACCCAACTCACAAATCTTCTCAAAGTCATCATCTTTTAACTCTCCCACTTTCTGCTTCTGGGTGAGGAAAGCCTCCAGGCGTTTCTTCTGCTGCTCATCCAGCTCCAGTTCTTCCAGTTTCTTCTGCAGAGCTTCCAGATTTGTTCTAACAGAcagaaaaatgaatttaatttgtaaaggGATGAAATGGTTCAATCTAC

Function

GO: NA

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction
ko04721 Synaptic vesicle cycle

RNA

RNA id representative length rna type GC content exon number start site end site
TU183917 True 300 lncRNA 0.45 1 4749395 4749694

Neighbor

gene id symbol gene type direction distance location
rpl4 rpl4,LOC107686296,LOC107596972,LOC107718306,LOC107583768,LOC107672218 coding upstream 5485 4740143 ~ 4743910 (+)
LOC122323236 NA coding upstream 6960 4742307 ~ 4742435 (+)
LOC122323242 NA coding upstream 7744 4741554 ~ 4741651 (+)
LOC122323241 NA coding upstream 8071 4741255 ~ 4741324 (+)
LOC122323235 NA coding upstream 8430 4740868 ~ 4740965 (+)
LOC122363106 olfcg4,LOC107751720,LOC107663261,LOC107572100,LOC107662185,LOC107728083,LOC107680406,LOC107564274,LOC107702188 coding downstream 565228 5314922 ~ 5318185 (+)
LOC122322945 LOC107674897 coding downstream 581509 5331203 ~ 5332855 (+)
LOC122322946 olfcg5,LOC107564274,LOC107702188,LOC107728083,LOC107680406,LOC107719307,LOC107569497,LOC107739792 coding downstream 597470 5347164 ~ 5350497 (+)
LOC122322947 LOC107564267,LOC107702191 coding downstream 620391 5370085 ~ 5381964 (+)
LOC122322926 LOC107742941,LOC107564271,LOC107557161,LOC107702193,LOC107742944,LOC107564269,LOC107557163,LOC107748628 coding downstream 635401 5385095 ~ 5389352 (+)
G124501 map2k1,LOC107672217,LOC107583767,LOC107686295,LOC107596971,LOC106592363 non-coding upstream 581 4747301 ~ 4748814 (+)
G124499 NA non-coding upstream 2212 4746505 ~ 4747183 (+)
G124498 NA non-coding upstream 3560 4745603 ~ 4745835 (+)
G124497 NA non-coding upstream 4088 4744760 ~ 4745307 (+)
LOC122323045 NA non-coding upstream 57451 4688034 ~ 4691944 (+)
G124502 NA non-coding downstream 228 4749922 ~ 4751165 (+)
G124503 NA non-coding downstream 2669 4752363 ~ 4752569 (+)
G124505 NA non-coding downstream 5044 4754738 ~ 4755186 (+)
G124506 NA non-coding downstream 6536 4756230 ~ 4756619 (+)
G124533 NA non-coding downstream 154074 4903768 ~ 4908169 (+)
nrn1la LOC107726468,LOC107694939,LOC107583849,LOC107596927,LOC107733575,LOC107672183 other upstream 1005639 3719888 ~ 3743756 (+)
tmem170a tmem170a,LOC107596918,LOC107583727 other upstream 1194705 3511957 ~ 3554690 (+)
chd2 chd2,LOC107690375,LOC107715217,LOC107693036,LOC107715589 other upstream 2287605 2410733 ~ 2461790 (+)
plin1 plin1,LOC107549017,LOC107715593,LOC107577193 other upstream 2430255 2301758 ~ 2319140 (+)
LOC122363059 LOC107714787,LOC107556260,LOC107691117,LOC107551460,LOC565819,LOC107715220,LOC107690391 other upstream 2509135 2207199 ~ 2240260 (+)
LOC122322928 megf11,LOC107596974,LOC107686294,LOC107672222 other downstream 9934 4759628 ~ 4795836 (+)
G124548 NA other downstream 321951 5071645 ~ 5110633 (+)
G124553 NA other downstream 389796 5139490 ~ 5140671 (+)
G124577 NA other downstream 476114 5225808 ~ 5226057 (+)
G124580 NA other downstream 478869 5228563 ~ 5229946 (+)

Expression


Co-expression Network