LOC122322928 (megf11,LOC107596974,LOC107686294,LOC107672222)


Basic Information

Item Value
gene id LOC122322928
gene name megf11,LOC107596974,LOC107686294,LOC107672222
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 4759628 ~ 4795836 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU183924
CAGAAACACTCGGCAACGGTGCAGGTTACAGAGGACGAGCCGCAGCGCTGCGCTCCGACAACACTAACCCGGTGAGGCGAACGGTACGGCGaaatttataaaacacactccAGGACTCTTCTTCACCCAGGCTGCCATAAATTACCTACGAGAAAGTGGAGAGTTTAATTACAGAGACGAAGACTATGGACGAACAGCAAGCAGCGATTTCAGATAAGGGAAAGTAATACGGACCAGGAGAagGTGCCCTCTCTTTGCTTTGAGCCTGATTATCGGTCTGTCTGGTCTCCAGCTCTTCTGTGTCTGGTTGTCTGGTTCGGCCGAGCAGTGATCTTCCACAACATCTCCAGGGATTGTAGCTCGTGGTCTGAGgagGAGTCATGGGGCCAGTACGGGCCTACCCATTAGCCCTGCCTGTGCTGGCTGTTCTGGGCCTCATTATCAGCGCGTGGAGCCTCAACCCAGATGACCCCAATGTCTGCAGTCACTGGGAGAGCTACGCAGTGACTGTTCAGGAGTCCTACGCTCATCCTTTTGACCAGATCTACTACACCAGGTGCACCGACATCCTCAATTGGTTTAAATGCACCAGACACAGGACCAGCTACAAGACAGCTTATCGTCGCGGGGTGAGGACCATGTACCGTCGACGTTCTCAATGCTGCCCTGGCTACTTCGAGAGCGGAGACTTGTGTGTCCCACGATGTACCGAGGAGTGTGCCCATGGTCGGTGTGTGTCTCCTGATACATGTCAGTGTGAGCCAGGCTGGGGAGGACTGGACTGCTCTAGTGGT
>XM_043216538.1
CGCGAGAGGCAGAAACACTCGGCAACGGTGCAGGTTACAGAGGACGAGCCGCAGCGCTGCGCTCCGACAACACTAACCCGGTGAGGCGAACGGTACGGCGaaatttataaaacacactccAGGACTCTTCTTCACCCAGGCTGCCATAAATTACCTACGAGAAAGTGGAGAGTTTAATTACAGAGACGAAGACTATGGACGAACAGCAAGCAGCGATTTCAGATAAGGGAAAGTAATACGGACCAGGAGAagGTGCCCTCTCTTTGCTTTGAGCCTGATTATCGGTCTGTCTGGTCTCCAGCTCTTCTGTGTCTGGTTGTCTGGTTCGGCCGAGCAGTGATCTTCCACAACATCTCCAGGGATTGTAGCTCGTGGTCTGAGgagGAGTCATGGGGCCAGTACGGGCCTACCCATTAGCCCTGCCTGTGCTGGCTGTTCTGGGCCTCATTATCAGCGCGTGGAGCCTCAACCCAGATGACCCCAATGTCTGCAGTCACTGGGAGAGCTACGCAGTGACTGTTCAGGAGTCCTACGCTCATCCTTTTGACCAGATCTACTACACCAGGTGCACCGACATCCTCAATTGGTTTAAATGCACCAGACACAGGACCAGCTACAAGACAGCTTATCGTCGCGGGGTGAGGACCATGTACCGTCGACGTTCTCAATGCTGCCCTGGCTACTTCGAGAGCGGAGACTTGTGTGTCCCACGATGTACCGAGGAGTGTGCCCATGGTCGGTGTGTGTCTCCTGATACATGTCAGTGTGAGCCAGGCTGGGGAGGACTGGACTGCTCTAGTGggttcCTCGTGGGCAACCCACCTCTGAAGCTCAAGATCCTCTCATGGGTGTCTCTGTCTGAGGACCACGCATTCTTCTGA

Function

symbol description
megf11 Predicted to enable zinc ion binding activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human MEGF11 (multiple EGF like domains 11).

NR:

description
PREDICTED: multiple epidermal growth factor-like domains protein 11 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU183924 False 794 TUCP 0.54 6 4759637 4793251
XM_043216538.1 True 881 mRNA 0.54 7 4759628 4795836

Neighbor

gene id symbol gene type direction distance location
rpl4 rpl4,LOC107686296,LOC107596972,LOC107718306,LOC107583768,LOC107672218 coding upstream 15718 4740143 ~ 4743910 (+)
LOC122323236 NA coding upstream 17193 4742307 ~ 4742435 (+)
LOC122323242 NA coding upstream 17977 4741554 ~ 4741651 (+)
LOC122323241 NA coding upstream 18304 4741255 ~ 4741324 (+)
LOC122323235 NA coding upstream 18663 4740868 ~ 4740965 (+)
LOC122363106 olfcg4,LOC107751720,LOC107663261,LOC107572100,LOC107662185,LOC107728083,LOC107680406,LOC107564274,LOC107702188 coding downstream 519086 5314922 ~ 5318185 (+)
LOC122322945 LOC107674897 coding downstream 535367 5331203 ~ 5332855 (+)
LOC122322946 olfcg5,LOC107564274,LOC107702188,LOC107728083,LOC107680406,LOC107719307,LOC107569497,LOC107739792 coding downstream 551328 5347164 ~ 5350497 (+)
LOC122322947 LOC107564267,LOC107702191 coding downstream 574249 5370085 ~ 5381964 (+)
LOC122322926 LOC107742941,LOC107564271,LOC107557161,LOC107702193,LOC107742944,LOC107564269,LOC107557163,LOC107748628 coding downstream 589259 5385095 ~ 5389352 (+)
G124506 NA non-coding upstream 3009 4756230 ~ 4756619 (+)
G124505 NA non-coding upstream 4442 4754738 ~ 4755186 (+)
G124503 NA non-coding upstream 7059 4752363 ~ 4752569 (+)
G124502 NA non-coding upstream 8463 4749922 ~ 4751165 (+)
G124500 NA non-coding upstream 9934 4749395 ~ 4749694 (+)
G124533 NA non-coding downstream 107932 4903768 ~ 4908169 (+)
G124544 NA non-coding downstream 215569 5011405 ~ 5183537 (+)
G124547 NA non-coding downstream 260914 5056750 ~ 5057838 (+)
G124595 NA non-coding downstream 558877 5354713 ~ 5354980 (+)
G124622 v2rx1,LOC107703364,LOC107568274,LOC107716020 non-coding downstream 864070 5659906 ~ 5660233 (+)
nrn1la LOC107726468,LOC107694939,LOC107583849,LOC107596927,LOC107733575,LOC107672183 other upstream 1015872 3719888 ~ 3743756 (+)
tmem170a tmem170a,LOC107596918,LOC107583727 other upstream 1204938 3511957 ~ 3554690 (+)
chd2 chd2,LOC107690375,LOC107715217,LOC107693036,LOC107715589 other upstream 2297838 2410733 ~ 2461790 (+)
plin1 plin1,LOC107549017,LOC107715593,LOC107577193 other upstream 2440488 2301758 ~ 2319140 (+)
LOC122363059 LOC107714787,LOC107556260,LOC107691117,LOC107551460,LOC565819,LOC107715220,LOC107690391 other upstream 2519368 2207199 ~ 2240260 (+)
G124548 NA other downstream 275809 5071645 ~ 5110633 (+)
G124553 NA other downstream 343654 5139490 ~ 5140671 (+)
G124577 NA other downstream 429972 5225808 ~ 5226057 (+)
G124580 NA other downstream 432727 5228563 ~ 5229946 (+)
G124598 NA other downstream 599059 5394895 ~ 5395312 (+)

Expression


Co-expression Network