CI01000001_01377825_01378304


Basic Information

Item Value
gene id CI01000001_01377825_01378304
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 1376792 ~ 1378304 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_01377825_01378304.mRNA
GAGCTAAGGAGAACCTGCGGGACTACAGCGGTCACTTAGCATGTCATTACCTCAATTTACGGGATACACAATTAGAAGACCAGGAACTACCTGAAGTCAGCGAGTGCCAAAGTCTAACCCAGGCCGGAGAGCGCAGGAACAGAAAGATCACGTCATTATTTCACTCCATGAAGAAGTGGGGTTCAGCGGAGGATCTTGCGCCGGTACCGGAGGAGAGGACTGTTGCTCATCAGCTCATGCTGCCTGCGTTTAGGCCTAGAAAGTTCTCACGGTAGACTGTGTGAAGTCCAAACATCTTCAGTCTTGCTTTAGTGCCAATTGGATAGTTTACGGATGAAAACGCACTTGTTTTCTTTGCTGCTTTTTTCTTTTCGCACAAATAGTATGATGTAATTATATTCACAATTCAGCTTAATAATTAGCTTAGCTAGGCACACTATGTAACTCTAGTGGTTAAAAAAAAACTGCATGCATTTTGCGGAAGAACATTGTTTTGGTTGTGCTTTGGCTCTGCGTGACTGTGCGGATGAATATGGTTATCATACATTCACTTAAAGGGCTTAAGAGATAAAAGTGTCACTTTCTCTTTTTGCCAGCAGACTCTCCTCTGTTCAGTGTTTGTTTAAAACGGGTGATTCTCTGGAGGTTTGAGATTTAACTGCTCCATGTCAACCTTTCTCGCTCATTGTGGCAACTAACCAATGCCACTCACACACCGTACACACGTCAAAGTAGCCAGAGGAACTTTTCTCTATTTATAGATAAATAGCGAGTGACGGATGTACGCGATTTCCCGACAGGTCTAAAATATAAACACTTATAATAGGCTTACCATACTGAATCAGGGTAAGACAAAAACACGTTTTGGAAGGATTGATGTATTGACCCATTGTTTAAATTTTGTTAATTTTGGGGGGAAAAAAAAGTTACATAGTGTATGTTTAAGTTCCATCTTGAATAGAGACCAACTTCAGCATTTCTTTGCCTTATCTTCACCTTACAAAACTTAAAAGTCAGAACCACAATTTACGGCTGCGTGAGAATGTACCAAAAATACCCTATTTTCATATTGTGTTAATGTATTATGTAATCATAATTATGTTTATGTAAAGATGTAATGATTTTCTCTGCCTCTGAAATATCTTTTCTTTTATGATGATGTAACCAAGGCTCTGTGGTCTGTGAAAAATAATATCAGCCAATAATATCACAGCCAAGTATTTTACAATTCAAGGGTGTCTTTCCTGTTACCTGAATGTTTATTTGAATAATGTAATTTATTTTCTCATATATAAAAGGAAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_01377825_01378304.mRNA True 1308 mRNA 0.38 2 1376792 1378304

Neighbor

gene id symbol gene type direction distance location
CI01000001_01368611_01369774 IRX7 coding downstream 6993 1368405 ~ 1369799 (-)
CI01000001_01313263_01351961 NA coding downstream 24557 1312687 ~ 1352235 (-)
CI01000001_01293807_01304836 CBLN4 coding downstream 71956 1293698 ~ 1304836 (-)
CI01000001_01199556_01205086 NA coding downstream 171706 1199498 ~ 1205086 (-)
CI01000001_01158947_01164142 ZNF217 coding downstream 211641 1158398 ~ 1165151 (-)
CI01000001_01421483_01453330 NA coding upstream 42626 1420930 ~ 1453330 (-)
CI01000001_01476453_01500640 NA coding upstream 97230 1475534 ~ 1500968 (-)
CI01000001_01555180_01558113 AGMAT coding upstream 175997 1554301 ~ 1558113 (-)
CI01000001_01565290_01569360 PINK1 coding upstream 186986 1565290 ~ 1569360 (-)
CI01000001_01582644_01584095 NA coding upstream 204340 1582644 ~ 1584440 (-)
G13415 NA non-coding downstream 117899 1258524 ~ 1258893 (-)
G13410 NA non-coding downstream 123499 1252995 ~ 1253293 (-)
G13409 NA non-coding downstream 124444 1252125 ~ 1252348 (-)
G13361 NA non-coding downstream 141996 1188474 ~ 1234796 (-)
G13364 NA non-coding downstream 161282 1186160 ~ 1215510 (-)
G13618 NA non-coding upstream 32583 1410887 ~ 1411156 (-)
G13619 NA non-coding upstream 33140 1411444 ~ 1411651 (-)
G13582 NA non-coding upstream 177939 1556243 ~ 1576197 (-)
G13670 NA non-coding upstream 269758 1648062 ~ 1648288 (-)
G13671 NA non-coding upstream 270888 1649192 ~ 1649430 (-)
CI01000001_00362143_00378213 NA other downstream 979659 361614 ~ 378213 (-)
CI01000001_00238241_00249437 NA other downstream 1119275 238241 ~ 249437 (-)
CI01000001_00124107_00131285 ELOVL4B other downstream 1241867 122814 ~ 131380 (-)
G14104 NA other upstream 385365 1763669 ~ 1771468 (-)
G14219 NA other upstream 615906 1994210 ~ 1994898 (-)
G14228 NA other upstream 677670 2055974 ~ 2056478 (-)
CI01000001_02258523_02262621 NA other upstream 881085 2258442 ~ 2263103 (-)
CI01000001_04395469_04399381 FKBP1B.L, FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other upstream 3014010 4392314 ~ 4399804 (-)

Expression


Co-expression Network