CI01000001_01760676_01761671 (CPTP)


Basic Information

Item Value
gene id CI01000001_01760676_01761671
gene name CPTP
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 1760166 ~ 1761671 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_01760676_01761671.mRNA
ATGGCAGATACATTCAGTCTTCAGAGGGTTTTAGAAACATTCAGATCAAGTCTGAGTGAGAATAAGGAGGTTTACATTAAATATTATATATCAGGATGGAAAGAGCTGGTCAGCTTCATGAATAGTTTGGGGAACGTGTTTTCCTTCATCTCCAAGGATGTGGTCTGCAAAATCCAGATCCTAGAGAACTTCCTTTCAGGAGAAAACGGATCCCATTATGTCACCATCCAGTCCATGGTGAAGTACGAGCTGGAAAATGACCTGGTGGACATCACCAAAAGAGGCAACCACCCAGAATCCGGTTGCCGGACTCTTCTGAGGCTTCATCGGGCTCTGCGCTGGCTGGAGCTCTTCCTCGAGAGACTGCGAACAAGCTCCGAGGACAGCAAGACCTCAGTCATGTGTTCGGATGCCTACAATGAGTCTCTGGCTCATCACCACCCCTGGCTCATCCGTAAAGCTGTCGGCGTGGCGTTCTGTGCACTTCCAGGGCGAAACACGTTCTTTGATGTGATGAATGCAGGTGATCACACGCAGGTGGTTGCTCTGTTAGGAGAGTCTTTGCCCCTCATCTCTGAGGTATACCAGATCACAGAAGACTTATATGCGAAGAACAACCTCCTGGAGTTACCATAGAGGGATAGATTTAGTTCCTTACACTAATTAATACATAGTTCTTGTGGCACATACTCACTTATTCACTACAAACATAGACTTTTTTGAATGTCTGGCTGTTTAAAAATATTCATTTATTTGTTTTGCTGAAGGGACATGCTGCAATATGCAGATTTAATGCATTTTATGCAGGGATCTGCTCATTTTACCTATAAACTACACAACCTTGTTGGCCGAGTGGGCTTTAAATGTTGGGTGTATTTTAATATACAGTATTTGAGCTTAGGGAACAATATAAAGCCATGATGTTTATTTAAAGGATGTTTATGATATATATTTTAATTTAAAGTGCTGTGTATTTGAACATATAGGTCATTTCCTTTTTCCTTGAATGTTAATTATCTTATTGGTGATCATTTTATTTCACTTGAATTCATGTTGAATGTGTGTATTACATCTGCAGCTTTGCTGAAACTACAAAGGGGGAAATGTTGTAGATGTAAAGATAAAATATGTAATGCAATAATTAAA

Function

symbol description
cptp Predicted to enable ceramide 1-phosphate binding activity and ceramide 1-phosphate transfer activity. Predicted to be involved in several processes, including lipid transport; negative regulation of NLRP3 inflammasome complex assembly; and negative regulation of interleukin-1 beta production. Predicted to act upstream of or within lipid transport. Predicted to be located in Golgi apparatus; bounding membrane of organelle; and plasma membrane. Predicted to be active in cytosol and membrane. Orthologous to human CPTP (ceramide-1-phosphate transfer protein).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_01760676_01761671.mRNA True 1146 mRNA 0.40 2 1760166 1761671

Neighbor

gene id symbol gene type direction distance location
CI01000001_01757774_01758445 NA coding downstream 723 1757189 ~ 1759443 (-)
CI01000001_01707363_01743870 VWA5B1 coding downstream 16296 1707089 ~ 1743870 (-)
CI01000001_01637015_01638058 FAM43B coding downstream 122108 1636695 ~ 1638058 (-)
CI01000001_01582644_01584095 NA coding downstream 175726 1582644 ~ 1584440 (-)
CI01000001_01565290_01569360 PINK1 coding downstream 190806 1565290 ~ 1569360 (-)
CI01000001_01772744_01773670 NA coding upstream 10660 1772331 ~ 1773670 (-)
CI01000001_01873684_01874535 NA coding upstream 111969 1873640 ~ 1874535 (-)
CI01000001_01902970_01917410 MARCH9 coding upstream 140758 1902429 ~ 1917454 (-)
CI01000001_01932927_01933914 TSPAN31 coding upstream 170950 1932621 ~ 1933914 (-)
CI01000001_01976950_01992032 GPR182, PIP4K2CA, PIP4K2C coding upstream 215045 1976716 ~ 1993561 (-)
G14100 NA non-coding downstream 5175 1754447 ~ 1754991 (-)
G14096 NA non-coding downstream 6935 1749106 ~ 1753231 (-)
G13679 NA non-coding downstream 83273 1676539 ~ 1676893 (-)
G13678 NA non-coding downstream 84088 1675806 ~ 1676078 (-)
G13674 NA non-coding downstream 93107 1666424 ~ 1667059 (-)
G14104 NA non-coding upstream 6285 1763669 ~ 1771468 (-)
G14112 NA non-coding upstream 105964 1867635 ~ 1871566 (-)
G14257 NA non-coding upstream 132035 1893706 ~ 1896090 (-)
G14259 NA non-coding upstream 158924 1920595 ~ 1920846 (-)
G14261 NA non-coding upstream 160228 1921899 ~ 1922240 (-)
CI01000001_00362143_00378213 NA other downstream 1363033 361614 ~ 378213 (-)
CI01000001_00238241_00249437 NA other downstream 1502649 238241 ~ 249437 (-)
CI01000001_00124107_00131285 ELOVL4B other downstream 1625241 122814 ~ 131380 (-)
G14219 NA other upstream 232539 1994210 ~ 1994898 (-)
G14228 NA other upstream 294303 2055974 ~ 2056478 (-)
CI01000001_02258523_02262621 NA other upstream 497718 2258442 ~ 2263103 (-)
CI01000001_04395469_04399381 FKBP1B.L, FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other upstream 2630643 4392314 ~ 4399804 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location