G126794


Basic Information

Item Value
gene id G126794
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 16746689 ~ 16863742 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU187218
tttttttttttCTTTTTGATCTAGTTATTAAATAGTCTTTATTGCAACACAAGACACTTCTACACCAAACCATCATTTAACATGCACTTCACCGAAGCCTTCGTCTCATCCCATCCCGCTCGATCCCTCAGACTCTTCCTCCTCGTCCTCAGAAGTCTTCCTCGGCGCTGCGGCAGCGTGACTGTCTGAGGAGCGTCAGTCTCTCCATCACCTGCTCCACGCTCAGCTCTCCATGCACTCTGTTATCTCTGGTCCTGACATTGACGCTGCTGGCGGCGCGCTCCTTCTCTCCCACCA
>TU187220
TATTAAATAGTCTTTATTGCAACACAAGACACTTCTACACCAAACCATCATTTAACATGCACTTCACCGAAGCCTTCGTCTCATCCCATCCCGCTCGATCCCTCAGACTCTTCCTCCTCGTCCTCAGAAGTCTTCCTCGGCGCTGCGGCAGCGTGACTGTCTGAGGAGCGTCAGTCTCTCCATCACCTGCTCCACGCTCAGCTCTCCATGCACTCTGTTATCTCTGGTCCTGACATTGACGCTGCTGGCGGCGCGCTCCTTCTCTCCCACCACTGCccaacaaacacacatcagaacacacacacacacactcacacacacacacacacacacacacacacacacacacacacacacc
>TU187222
TATTAAATAGTCTTTATTGCAACACAAGACACTTCTACACCAAACCATCATTTAACATGCACTTCACCGAAGCCTTCGTCTCATCCCATCCCGCTCGATCCCTCAGACTCTTCCTCCTCGTCCTCAGAAGTCTTCCTCGGCGCTGCGGCAGCGTGACTGTCTGAGGAGCGTCAGTCTCTCCATCACCTGCTCCACGCTCAGCTCTCCATGCACTCTGTTATCTCTGGTCCTGACATTGACGCTGCTGGCGGCGCGCTCCTTCTCTCCCACCACTGCccaacaaacacacatcagaacacacacacacacacacacacacacacacacacacacacacacacactctctctcggGCCTCGGGTCACGAGAGAGCGTCCAGATCAAGGTCCAGTCCGGAGCACGGTGAGGTTTGTTGGAGATGTTCCTCACAGATAAAGCTCCTTGGCTCTGATGTGCTGCAGCTTCTCTCGCAGCAGACGGAACGAGGGCCGTCCGGCCGGGTCCAGCGTCCAGCACTGCTTCATCAGGTCATAGACCGCAGCCGGACATCCGTCGGGAGCGTCCATCTT

Function

GO:

id name namespace
GO:0072350 tricarboxylic acid metabolic process biological_process

KEGG:

id description
ko00020 Citrate cycle (TCA cycle)

RNA

RNA id representative length rna type GC content exon number start site end site
TU187218 False 297 lncRNA 0.51 2 16746689 16805490
TU187220 False 358 lncRNA 0.53 2 16805219 16863742
TU187222 True 569 lncRNA 0.56 2 16805219 16862469

Neighbor

gene id symbol gene type direction distance location
myef2 myef2,LOC107698879,LOC107739991,LOC107568149 coding upstream 28531 16705581 ~ 16718158 (+)
fbn1 fbn1,LOC107713176,LOC107595388,LOC102779271 coding upstream 68623 16618170 ~ 16678066 (+)
secisbp2l secisbp2l,LOC107573840,LOC107740797,LOC107713195,LOC106587693,LOC107698883 coding upstream 136563 16592589 ~ 16610126 (+)
LOC122323202 nnt2,LOC108412674 coding upstream 195972 16536459 ~ 16550717 (+)
slc30a4 slc30a4 coding upstream 224006 16514170 ~ 16522683 (+)
LOC122363001 NA coding downstream 95082 16958824 ~ 16971364 (+)
LOC122362752 LOC107665215,LOC107595393 coding downstream 203352 17067094 ~ 17069819 (+)
LOC122362967 NA coding downstream 215317 17079059 ~ 17099562 (+)
unc13c unc13c,LOC107554226,LOC107665324,LOC108411445 coding downstream 462224 17325966 ~ 17354848 (+)
ompa omp,ompa,LOC107735103,LOC107660685 coding downstream 561412 17425154 ~ 17425977 (+)
LOC122362527 NA non-coding upstream 7319 16736723 ~ 16739370 (+)
G126815 slc24a5 non-coding upstream 23215 16723216 ~ 16723474 (+)
G126813 slc24a5 non-coding upstream 26559 16719496 ~ 16720130 (+)
G126792 NA non-coding upstream 73383 16672536 ~ 16673306 (+)
G126786 NA non-coding upstream 135214 16611181 ~ 16611475 (+)
G126854 NA non-coding downstream 73359 16937101 ~ 16937486 (+)
G126856 NA non-coding downstream 79077 16942819 ~ 16943240 (+)
G126858 NA non-coding downstream 80621 16944363 ~ 16944728 (+)
G126859 NA non-coding downstream 81550 16945292 ~ 16946656 (+)
G126865 NA non-coding downstream 109969 16973711 ~ 16975385 (+)
LOC122362750 homer2,homer3,LOC107595365,LOC107569981,LOC107703939,LOC107726331,LOC107723860,LOC107692231,LOC107572947,LOC107753825 other upstream 475422 16263839 ~ 16271267 (+)
LOC122362745 si:ch211-71n6.4,si:dkey-30c15.17,LOC107686550,LOC107559644,LOC107753016,LOC107758068,LOC107670624,LOC107672404,LOC107733274 other upstream 691062 16047069 ~ 16055627 (+)
LOC122362954 LOC107740354 other upstream 793036 15950982 ~ 15953653 (+)
LOC122362588 NA other upstream 1698796 15035383 ~ 15047893 (+)
LOC122322993 LOC107709552 other upstream 1836532 14906616 ~ 14910157 (+)
G126884 ctxn2 other downstream 210452 17074194 ~ 17077159 (+)
LOC122362575 NA other downstream 266180 17129922 ~ 17171335 (+)
LOC122322904 NA other downstream 440027 17303769 ~ 17309158 (+)
G127098 NA other downstream 546943 17410685 ~ 17411593 (+)
serp1 NA other downstream 590412 17454154 ~ 17455657 (+)

Expression


Co-expression Network