G126859


Basic Information

Item Value
gene id G126859
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 16945292 ~ 16946656 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU187330
tgacggcacccattcatatTCTTGAGACACATTTCTACAAACCGAGGAAGAAACGAAGCCATCTGATTAACCTTCATTTCTGCAAACATCATCAgcgtaaacattttaatgaagtaCATCTACACCCATGATGACACAacataaacatgctttaaaaacggCTAACAAACAGTTAAAAGGTGCATCAaaccacattttctttttacttaaaGTTACTACTTTGAGTCGAGGAAAAGGGAAACAGGAAGGACAGAAATGCTGGAGATAGAAATCCCACCTCCAGAGGACAGCAGTGAGATCAGATCGAAATACTGTTCTTTggcttcatcatcatcatcatcatcatcaactaaAAAGACATTGTTGTTCACATCAGTGCAGTTATTGTGAAACTTACATGAGCCGCATTGATTCAGTTCAACCACGCAAACCAATGCAAGTCAGCTTTTCAGAAAATTCAACattatttacaacttttttttttacatggacaaacataaaacacacaagtaGTGATTGTAATAGCAGTagcataaaatatgtatttcatcAGTCTTATTTGTTTTGAACCTTGAGCTTTAGCTCATCATATGTCATCATGAATCATTTCCCTTCTGCGTTTCGTTTTAGCGCATGTTGATATAAATTCATCTGAAAACAGCAAACTTGCGTCCGCGCACTGAACTATCATCGACCCAGTGCAGGaaaacacagacacgcacacataaTAAAGCCGTTCTGCTGAATGGAATCGCATTGAAATGCAGTCTGTGGGTTTCCTTTGCACTCCGGTGAGCGTTTGTGGTTTAAAAATAGCTGGAGTCATTGAATTCTTCCTAACCGCATCTTCTGGCTCGCCTTTCAAACCATCGCCCGCGTTTCATGCATTTCATAACGTgagaaataaagcaataaactaGTAAAGCAAACATGAAACAGGACCATAAagtgcaaaaaacacaaaatcacgAGTCAGTTGTGCATTTTGAATGAGAACATTAATTTTAGCtgtaaacaacacaaaaattcaaaattatttatgtaatagtTTTAATACTCTCAAACAATTActgaatccaaaataaaacttttgttttcatggtatgtgctgtgtatatttattatgtatatagaaatatacattcgtaaagtatatatattttgaaaatatacattttatatggtatgtaaatatatgttatatttttattaaatacatacacgCTTGTGTCAATGTACACAGCACACagacatatgtaaacaaaacttattttagatATGATTAATCTCGACTAATCATTTAATTAGCACTAAATATTAATCTTATTGCTATATTGTACTTTTAAAGTACCATATAGTTGAAAA
>TU187331
attttaatgaagtaCATCTACACCCATGATGACACAacataaacatgctttaaaaacggCTAACAAACAGTTAAAAGGTGCATCAaaccacattttctttttacttaaaGTTACTACTTTGAGTCGAGGAAAAGGGAAACAGGAAGGACAGAAATGCTGGAGATAGAAATCCCACCTCCAGAGGACAGCAGTGAGATCAGATCGAAATACTGTTCTTTggcttcatcatcatcatcatcatcatcaactaaAAAGACATTGTTGTTCACATCAGTGCAGTTATTGTGAAACTTACATGAGCCGCATTGATTCAGTTCAACCACGCAAACCAATGCAAGTCAGCTTTTCAGAAAATTCAACattatttacaacttttttttttacatggacaaacataaaacacacaagtaGTGATTGTAATAGCAGTagcataaaatatgtatttcatcAGTCTTATTTGTTTTGAACCTTGAGCTTTAGCTCATCATATGTCATCATGAATCATTTCCCTTCTGCGTTTCGTTTTAGCGCATGTTGATATAAATTCATCTGAAAACAGCAAACTTGCGTCCGCGCACTGAACTATCATCGACCCAGTGCAGGaaaacacagacacgcacacataaTAAAGCCGTTCTGCTGAATGGAATCGCATTGAAATGCAGTCTGTGGGTTTCCTTTGCACTCCGGTGAGCGTTTGTGGTTTAAAAATAGCTGGAGTCATTGAATTCTTCCTAACCGCATCTTCTGGCTCGCCTTTCAAACCATCGCCCGCGTTTCATGCATTTCATAACGTgagaaataaagcaataaactaGTAAAGCAAACATGAAACAGGACCATAAagtgcaaaaaacacaaaatcacgAGTCAGTTGTGCATTTTGAATGAGAACATTAATTTTAGCtgtaaacaacacaaaaattcaaaattatttatgtaatagtTTTAATACTCTCAAACAATTActgaatccaaaataaaacttttgttttcatggtatgtgctgtgtatatttattatgtatatagaaatatacattcgtaaagtatatatattttgaaaatatacattttatatggtatgtaaatatatgttatatttttattaaatacatacacgCTTGTGTCAATGTACACAGCACACagacatatgtaaacaaaacttattttagatATGATTAATCTCGACTAATCATTTAATTAGCACTAAATATTAATCTTATTGCTATATTGTACTTTTAAAGTACCATATAGTTGAAAA

Function

GO:

id name namespace
GO:0005886 plasma membrane cellular_component
GO:0071944 cell periphery cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU187330 True 1365 lncRNA 0.34 1 16945292 16946656
TU187331 False 1263 lncRNA 0.33 1 16945394 16946656

Neighbor

gene id symbol gene type direction distance location
ulk3 ulk3,LOC107665498,LOC107681021,LOC107595383 coding upstream 115938 16819287 ~ 16829354 (+)
larp6a larp6,LOC107712978,LOC107595350,LOC107739963,LOC107576037,LOC103354325 coding upstream 155619 16780682 ~ 16789673 (+)
myef2 myef2,LOC107698879,LOC107739991,LOC107568149 coding upstream 227134 16705581 ~ 16718158 (+)
fbn1 fbn1,LOC107713176,LOC107595388,LOC102779271 coding upstream 267226 16618170 ~ 16678066 (+)
secisbp2l secisbp2l,LOC107573840,LOC107740797,LOC107713195,LOC106587693,LOC107698883 coding upstream 335166 16592589 ~ 16610126 (+)
LOC122363001 NA coding downstream 12168 16958824 ~ 16971364 (+)
LOC122362752 LOC107665215,LOC107595393 coding downstream 120438 17067094 ~ 17069819 (+)
LOC122362967 NA coding downstream 132403 17079059 ~ 17099562 (+)
unc13c unc13c,LOC107554226,LOC107665324,LOC108411445 coding downstream 379310 17325966 ~ 17354848 (+)
ompa omp,ompa,LOC107735103,LOC107660685 coding downstream 478498 17425154 ~ 17425977 (+)
G126858 NA non-coding upstream 564 16944363 ~ 16944728 (+)
G126856 NA non-coding upstream 2052 16942819 ~ 16943240 (+)
G126854 NA non-coding upstream 7806 16937101 ~ 16937486 (+)
G126797 NA non-coding upstream 71307 16835289 ~ 16873985 (+)
G126794 NA non-coding upstream 81550 16746689 ~ 16863742 (+)
G126865 NA non-coding downstream 27055 16973711 ~ 16975385 (+)
G126867 NA non-coding downstream 67102 17013758 ~ 17015325 (+)
G126875 NA non-coding downstream 68876 17015532 ~ 17017525 (+)
G126879 NA non-coding downstream 74730 17021386 ~ 17023370 (+)
G126881 NA non-coding downstream 84894 17031550 ~ 17033340 (+)
G126820 NA other upstream 126893 16753709 ~ 16818399 (+)
LOC122362750 homer2,homer3,LOC107595365,LOC107569981,LOC107703939,LOC107726331,LOC107723860,LOC107692231,LOC107572947,LOC107753825 other upstream 674025 16263839 ~ 16271267 (+)
LOC122362745 si:ch211-71n6.4,si:dkey-30c15.17,LOC107686550,LOC107559644,LOC107753016,LOC107758068,LOC107670624,LOC107672404,LOC107733274 other upstream 889665 16047069 ~ 16055627 (+)
LOC122362954 LOC107740354 other upstream 991639 15950982 ~ 15953653 (+)
LOC122362588 NA other upstream 1897399 15035383 ~ 15047893 (+)
G126884 ctxn2 other downstream 127538 17074194 ~ 17077159 (+)
LOC122362575 NA other downstream 183266 17129922 ~ 17171335 (+)
LOC122322904 NA other downstream 357113 17303769 ~ 17309158 (+)
G127098 NA other downstream 464029 17410685 ~ 17411593 (+)
serp1 NA other downstream 507498 17454154 ~ 17455657 (+)

Expression


Co-expression Network