G126879


Basic Information

Item Value
gene id G126879
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 17021386 ~ 17023370 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU187363
TCCTCAtccgaacacaaaggaaaacaCTCAAACGCATTCAGTATTGCTCCGTTTATTAGGCcctttatttttacacaggACGGGACCGAGTTTGACTTCCTGAACGTCGTGCGGTGAGCAGAGAGGCGGAAAAACCCACAGAATTCACAGAAACTTTGAGGAATCAGATTTTATCGATGCCCAGCTCCTCTGGAGTGGAGATGCCCAGCTCCTGCAGCGTGGGTCTGAGCTCCTGGATCACGTACGGGTAGATCTCTTTATGAGAGCCAGACTTATCCTATAGAGAGATAACACAGTTAGTGGTTCACTTCTAATTCATGACAAATGTGCTTCGGTTACTTTATGGATTAAGATTAAATGCAAGGAATGGTTCTGAGATCAGGATGAGTGTGTTTTTCGGGAGAAACGTGTctctgtgaatgggtgccgtcagaatgagaacaCCCGGAGACAAATAATCCAGCGTTAACTCAAACATGAGTCCATAATCTATATAATCCAGTGAAAAAAAGCACATCAAAACACACCCATATATTATTCAAGAGCTGCCTTTTCTTGTAAACGCTGCCGGATCGGAGCAgatttctctcccgattcagaccgggattaattagtttaatcattctgacggcacccattcacgtcCATGCGGACGAAGGACGGCCAGACGACGGCTGCTCTCTCACTCTGACGGCCTCGAGGATGCGGACGGCACTGGCCAGGTCGTTCAGTCTCCTGCAGGCGCGCAGAGCAGAGTCCAGGATCTTCGGCTCCGGAACCAGGTCGTATCCGATCAGAGTGTTCATACCTGCAGAGAAATCAGAGGCGCTTCCTGAGCAGCGAATCGGGGCCATCTCTGAAGCATCAATCCTCGATTAAAGTCAAGCCAAAAAGTATTCAGACGCCGTTCTCACTGTAGTTCATTtatgcaaaacacaacaaaccCAATAATTcttcatgcattaaaatgcGGGGCCAGAAATGATCCAGACACTAATGCATTCGTTACCGAACAAAATAAAGCAACGGTTGAGCTAAATCAAGAATTGCGTACTAAGAAGTTAACATCTAACTCGATTCATTACATGAAAGTTATCGgagattcatttattcattcattcatttgctcGACACAGATTTCGGGTCATATTTTATCACCTCTTTCTAAACCGCAGCCAATATAAACTCTGATACTGTGTCAAATGTTGAAGGCGTCCGGATAGAGGTTGGTTTGATTGTGCACTTCACCACTGAACACATCTCCTCGActcgtgtgtgtgtgtgtttactgtactGTGACCTTTGCGCAGCTCCCAGGCGTCCAGGTCCGGTTTGCTGAAGTACGTGACCCAGCGGGAGTCAAACTCTTCATCCGTCTCCACTTTAGCGTGAGAGTAACATCTGAGAGCCAGAGGAGCTGCGAAACACACTCAGACTGAAAAACCTGACACAACTTAGGCCTGTATGTCAACAACAACACGAGAGGCACGCGTTTCTGAGAGCTCTGTGTGCGAGGCGGGTCGTTACaaggacaaacacacacacacatatacacatgcatgcatatgtacataaacacacacattcgaGCGAGCAGCGAGCGGCTTTAACATCGCGACGCGACGAAATTTAACGGAAGGTCACCGCCATTCTCGGACTGTCGCCGGTTTCCGCGACCGGGTGAAGCTTCGCGGAGCTCGCTGGCGTTCGTGCGGGTTTTCTGTACCTGTGAAGGCGGCTCGTGTTCGGGTCAGAGCCCCGACCCCGCGCAGAACCGCCGCTGAAATCATCCTGCAGCCGCCGAGATCACCGACGAACCGAAACTGCGCTCCGAACGG

Function

GO:

id name namespace
GO:0005488 binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU187363 True 1838 lncRNA 0.49 3 17021386 17023370

Neighbor

gene id symbol gene type direction distance location
LOC122363001 NA coding upstream 50022 16958824 ~ 16971364 (+)
ulk3 ulk3,LOC107665498,LOC107681021,LOC107595383 coding upstream 192032 16819287 ~ 16829354 (+)
larp6a larp6,LOC107712978,LOC107595350,LOC107739963,LOC107576037,LOC103354325 coding upstream 231713 16780682 ~ 16789673 (+)
myef2 myef2,LOC107698879,LOC107739991,LOC107568149 coding upstream 303228 16705581 ~ 16718158 (+)
fbn1 fbn1,LOC107713176,LOC107595388,LOC102779271 coding upstream 343320 16618170 ~ 16678066 (+)
LOC122362752 LOC107665215,LOC107595393 coding downstream 43724 17067094 ~ 17069819 (+)
LOC122362967 NA coding downstream 55689 17079059 ~ 17099562 (+)
unc13c unc13c,LOC107554226,LOC107665324,LOC108411445 coding downstream 302596 17325966 ~ 17354848 (+)
ompa omp,ompa,LOC107735103,LOC107660685 coding downstream 401784 17425154 ~ 17425977 (+)
LOC122322924 NA coding downstream 413781 17437151 ~ 17440065 (+)
G126875 NA non-coding upstream 3861 17015532 ~ 17017525 (+)
G126867 NA non-coding upstream 6061 17013758 ~ 17015325 (+)
G126865 NA non-coding upstream 46001 16973711 ~ 16975385 (+)
G126859 NA non-coding upstream 74730 16945292 ~ 16946656 (+)
G126858 NA non-coding upstream 76658 16944363 ~ 16944728 (+)
G126881 NA non-coding downstream 8180 17031550 ~ 17033340 (+)
LOC122362576 NA non-coding downstream 113265 17136635 ~ 17139135 (+)
G126893 NA non-coding downstream 148635 17172005 ~ 17172305 (+)
G126903 NA non-coding downstream 233441 17256811 ~ 17257363 (+)
G126906 NA non-coding downstream 254836 17278206 ~ 17278585 (+)
G126820 NA other upstream 202987 16753709 ~ 16818399 (+)
LOC122362750 homer2,homer3,LOC107595365,LOC107569981,LOC107703939,LOC107726331,LOC107723860,LOC107692231,LOC107572947,LOC107753825 other upstream 750119 16263839 ~ 16271267 (+)
LOC122362745 si:ch211-71n6.4,si:dkey-30c15.17,LOC107686550,LOC107559644,LOC107753016,LOC107758068,LOC107670624,LOC107672404,LOC107733274 other upstream 965759 16047069 ~ 16055627 (+)
LOC122362954 LOC107740354 other upstream 1067733 15950982 ~ 15953653 (+)
LOC122362588 NA other upstream 1973493 15035383 ~ 15047893 (+)
G126884 ctxn2 other downstream 50824 17074194 ~ 17077159 (+)
LOC122362575 NA other downstream 106552 17129922 ~ 17171335 (+)
LOC122322904 NA other downstream 280399 17303769 ~ 17309158 (+)
G127098 NA other downstream 387315 17410685 ~ 17411593 (+)
serp1 NA other downstream 430784 17454154 ~ 17455657 (+)

Expression


Co-expression Network