LOC122322904


Basic Information

Item Value
gene id LOC122322904
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 17303769 ~ 17309158 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU187389
CAGccgagcagcagcagcagcagcagcatggcATCTTCAAAGCAGAAGGCGGTGTATTGGCTGGGAAACGATACTCTGAGGGTCTCGGCCGCCCTGTTCGCAGAAAACCGAGAGCGTTTGTGTCGAGGCCTGAAAGCTGAGAAGGGGTTTCAGCCTGGATCTGTGGTGCTTCTTCAAGGAGGAGAACAGAAGCAGAGATACTGCACCGACACCGACATGCTCTTCAGACAGG
>TU187390
CAGccgagcagcagcagcagcagcagcatggcATCTTCAAAGCAGAAGGCGGTGTATTGGCTGGGAAACGATACTCTGAGGGTCTCGGCCGCCCTGTTCGCAGAAAACCGAGAGCGTTTGTGTCGAGGCCTGAAAGCTGAGAAGGGGTTTCAGCCTGGATCTGTGGTGCTTCTTCAAGGAGGAGAACAGAAGCAGAGATACTGCACCGACACCGACATGCTCTTCAGACAGGAGTCGTTTTCC
>XM_043216503.1
TCACGTGATCGAGCGACGATCAGCTGCTCCCGGTCACGTGACTCGCTCTCTCAGccgagcagcagcagcagcagcagcatggcATCTTCAAAGCAGAAGGCGGTGTATTGGCTGGGAAACGATACTCTGAGGGTCTCGGCCGCCCTGTTCGCAGAAAACCGAGAGCGTTTGTGTCGAGGCCTGAAAGCTGAGAAGGGGTTTCAGCCTGGATCTGTGGTGCTTCTTCAAGGAGGAGAACAGAAGCAGAGATACTGCACCGACACCGACATGCTCTTCAGACAGGTGCTGCACGCTCAACACGAGTCAAAAACCCTTCCTCATTCACTCCGAAGCGACTGAAATCAAATTAGAGAA

Function

GO:

id name namespace
GO:0004177 aminopeptidase activity molecular_function
GO:0030145 manganese ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU187389 False 232 TUCP 0.56 2 17303820 17305974
TU187390 False 243 TUCP 0.56 3 17303820 17309158
XM_043216503.1 True 354 mRNA 0.55 2 17303769 17306045

Neighbor

gene id symbol gene type direction distance location
LOC122362967 NA coding upstream 204207 17079059 ~ 17099562 (+)
LOC122362752 LOC107665215,LOC107595393 coding upstream 233950 17067094 ~ 17069819 (+)
LOC122363001 NA coding upstream 332405 16958824 ~ 16971364 (+)
ulk3 ulk3,LOC107665498,LOC107681021,LOC107595383 coding upstream 474415 16819287 ~ 16829354 (+)
larp6a larp6,LOC107712978,LOC107595350,LOC107739963,LOC107576037,LOC103354325 coding upstream 514096 16780682 ~ 16789673 (+)
unc13c unc13c,LOC107554226,LOC107665324,LOC108411445 coding downstream 16808 17325966 ~ 17354848 (+)
ompa omp,ompa,LOC107735103,LOC107660685 coding downstream 115996 17425154 ~ 17425977 (+)
LOC122322924 NA coding downstream 127993 17437151 ~ 17440065 (+)
lrch3 lrch3,LOC107735844 coding downstream 147932 17457090 ~ 17482180 (+)
LOC122362636 LOC107554234,LOC107665407,LOC107713070 coding downstream 189371 17498529 ~ 17500517 (+)
G126906 NA non-coding upstream 25184 17278206 ~ 17278585 (+)
G126903 NA non-coding upstream 46406 17256811 ~ 17257363 (+)
G126893 NA non-coding upstream 131464 17172005 ~ 17172305 (+)
LOC122362576 NA non-coding upstream 164634 17136635 ~ 17139135 (+)
G126881 NA non-coding upstream 270429 17031550 ~ 17033340 (+)
G127103 NA non-coding downstream 135803 17444961 ~ 17446064 (+)
G127110 NA non-coding downstream 140313 17449471 ~ 17449801 (+)
LOC122322999 NA non-coding downstream 206501 17515659 ~ 17520724 (+)
LOC122323095 NA non-coding downstream 212466 17521624 ~ 17527930 (+)
G127195 NA non-coding downstream 386176 17695334 ~ 17695593 (+)
LOC122362575 NA other upstream 132434 17129922 ~ 17171335 (+)
G126884 ctxn2 other upstream 226610 17074194 ~ 17077159 (+)
G126820 NA other upstream 485370 16753709 ~ 16818399 (+)
LOC122362750 homer2,homer3,LOC107595365,LOC107569981,LOC107703939,LOC107726331,LOC107723860,LOC107692231,LOC107572947,LOC107753825 other upstream 1032502 16263839 ~ 16271267 (+)
LOC122362745 si:ch211-71n6.4,si:dkey-30c15.17,LOC107686550,LOC107559644,LOC107753016,LOC107758068,LOC107670624,LOC107672404,LOC107733274 other upstream 1248142 16047069 ~ 16055627 (+)
G127098 NA other downstream 101527 17410685 ~ 17411593 (+)
serp1 NA other downstream 144996 17454154 ~ 17455657 (+)
G127239 prtg,prtga,LOC107659194,LOC107574380,LOC107601141 other downstream 499443 17808601 ~ 17814422 (+)
sdr42e1 sdr42e1,LOC107712579,LOC107659233,LOC107736292,LOC107600430,LOC107579813 other downstream 574460 17883618 ~ 17887211 (+)
G127258 NA other downstream 613770 17922928 ~ 17928165 (+)

Expression


Co-expression Network